RNA–Protein interactions for RNA: ENST00000569575.5

RAB40C-212, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-212ENST00000569575 SERPINA10Q9UK55 444 aa28.39■■■□□ 2.14
RAB40C-212ENST00000569575 GJA3Q9Y6H8 435 aa28.39■■■□□ 2.14
RAB40C-212ENST00000569575 IDH1O75874 414 aaKnown RBP28.38■■■□□ 2.13
RAB40C-212ENST00000569575 UBE3CQ15386 1083 aa28.38■■■□□ 2.13
RAB40C-212ENST00000569575 TBC1D9Q6ZT07 1266 aa28.38■■■□□ 2.13
RAB40C-212ENST00000569575 DZIP1Q86YF9 867 aaKnown RBP28.38■■■□□ 2.13
RAB40C-212ENST00000569575 ANTXR1Q9H6X2 564 aa28.38■■■□□ 2.13
RAB40C-212ENST00000569575 TTF2Q9UNY4 1162 aaKnown RBP28.38■■■□□ 2.13
RAB40C-212ENST00000569575 GSPT1P15170 499 aaKnown RBP28.37■■■□□ 2.13
RAB40C-212ENST00000569575 PRDX5P30044 214 aa28.37■■■□□ 2.13
RAB40C-212ENST00000569575 NSUN4Q96CB9 384 aaKnown RBP28.37■■■□□ 2.13
RAB40C-212ENST00000569575 FSD1Q9BTV5 496 aa28.37■■■□□ 2.13
RAB40C-212ENST00000569575 JAG2Q9Y219 1238 aa28.37■■■□□ 2.13
RAB40C-212ENST00000569575 H7C1D1 291 aa28.36■■■□□ 2.13
RAB40C-212ENST00000569575 MAP4K4O95819 1239 aaPredicted RBP28.36■■■□□ 2.13
RAB40C-212ENST00000569575 SDSP20132 328 aa28.36■■■□□ 2.13
RAB40C-212ENST00000569575 LMOD1P29536 600 aaPredicted RBP28.36■■■□□ 2.13
RAB40C-212ENST00000569575 ZNF280AP59817 542 aaPredicted RBP28.36■■■□□ 2.13
RAB40C-212ENST00000569575 MTMR14Q8NCE2 650 aa28.36■■■□□ 2.13
RAB40C-212ENST00000569575 RILPL2Q969X0 211 aa28.36■■■□□ 2.13
RAB40C-212ENST00000569575 IQCA1LA6NCM1 817 aa28.35■■■□□ 2.13
RAB40C-212ENST00000569575 GMPSP49915 693 aaPredicted RBP28.35■■■□□ 2.13
RAB40C-212ENST00000569575 MECOMQ03112 1051 aa28.35■■■□□ 2.13
RAB40C-212ENST00000569575 SLC9C2Q5TAH2 1124 aa28.35■■■□□ 2.13
RAB40C-212ENST00000569575 NAA16Q6N069 864 aaPredicted RBP28.35■■■□□ 2.13
RAB40C-212ENST00000569575 KIAA0825Q8IV33 1275 aa28.35■■■□□ 2.13
RAB40C-212ENST00000569575 TEKT1Q969V4 418 aa28.35■■■□□ 2.13
RAB40C-212ENST00000569575 GPRC5DQ9NZD1 345 aa28.35■■■□□ 2.13
RAB40C-212ENST00000569575 NDUFB9Q9Y6M9 179 aa28.35■■■□□ 2.13
RAB40C-212ENST00000569575 AK9Q5TCS8 1911 aa28.35■■■□□ 2.13
RAB40C-212ENST00000569575 MYH7P12883 1935 aa28.34■■■□□ 2.13
RAB40C-212ENST00000569575 DDNO94850 711 aaPredicted RBP28.34■■■□□ 2.13
RAB40C-212ENST00000569575 MAST2Q6P0Q8 1798 aa28.34■■■□□ 2.13
RAB40C-212ENST00000569575 RNF113AO15541 343 aaKnown RBP28.33■■■□□ 2.13
RAB40C-212ENST00000569575 ADD2P35612 726 aa28.33■■■□□ 2.13
RAB40C-212ENST00000569575 EDC3Q96F86 508 aaKnown RBP28.33■■■□□ 2.13
RAB40C-212ENST00000569575 CNOT7Q9UIV1 285 aaKnown RBP28.33■■■□□ 2.13
RAB40C-212ENST00000569575 ZBTB12Q9Y330 459 aaPredicted RBP28.33■■■□□ 2.13
RAB40C-212ENST00000569575 SCN4AP35499 1836 aa28.32■■■□□ 2.12
RAB40C-212ENST00000569575 MXD3Q9BW11 206 aa28.32■■■□□ 2.12
RAB40C-212ENST00000569575 BAG3O95817 575 aa28.31■■■□□ 2.12
RAB40C-212ENST00000569575 PDE6AP16499 860 aa28.31■■■□□ 2.12
RAB40C-212ENST00000569575 SCNN1DP51172 638 aa28.31■■■□□ 2.12
RAB40C-212ENST00000569575 MAGEB6Q8N7X4 407 aa28.31■■■□□ 2.12
RAB40C-212ENST00000569575 ZDHHC15Q96MV8 337 aa28.31■■■□□ 2.12
RAB40C-212ENST00000569575 NOL10Q9BSC4 688 aaKnown RBP28.31■■■□□ 2.12
RAB40C-212ENST00000569575 GAKO14976 1311 aa28.31■■■□□ 2.12
RAB40C-212ENST00000569575 WDR90Q96KV7 1748 aa28.31■■■□□ 2.12
RAB40C-212ENST00000569575 PLCG2P16885 1265 aa28.3■■■□□ 2.12
RAB40C-212ENST00000569575 CASC1Q6TDU7 716 aa28.3■■■□□ 2.12
RAB40C-212ENST00000569575 APPBP2Q92624 585 aa28.3■■■□□ 2.12
RAB40C-212ENST00000569575 MYO5AQ9Y4I1 1855 aaKnown RBP28.29■■■□□ 2.12
RAB40C-212ENST00000569575 MROH7-TTC4A0A0A0MT08 1334 aa28.29■■■□□ 2.12
RAB40C-212ENST00000569575 EIF5BO60841 1220 aaKnown RBP28.29■■■□□ 2.12
RAB40C-212ENST00000569575 CRKP46108 304 aa28.29■■■□□ 2.12
RAB40C-212ENST00000569575 PPP4CP60510 307 aa28.29■■■□□ 2.12
RAB40C-212ENST00000569575 GRIK5Q16478 980 aa28.29■■■□□ 2.12
RAB40C-212ENST00000569575 SKAP1Q86WV1 359 aa28.29■■■□□ 2.12
RAB40C-212ENST00000569575 MICALL2Q8IY33 904 aa28.29■■■□□ 2.12
RAB40C-212ENST00000569575 RUFY2Q8WXA3 655 aa28.29■■■□□ 2.12
RAB40C-212ENST00000569575 HELLSQ9NRZ9 838 aa28.29■■■□□ 2.12
RAB40C-212ENST00000569575 HACL1Q9UJ83 578 aa28.29■■■□□ 2.12
RAB40C-212ENST00000569575 MYH2Q9UKX2 1941 aa28.28■■■□□ 2.12
RAB40C-212ENST00000569575 GPR75-ASB3A0A0A6YYF3 556 aa28.28■■■□□ 2.12
RAB40C-212ENST00000569575 F8W031 263 aaPredicted RBP28.28■■■□□ 2.12
RAB40C-212ENST00000569575 CYP7A1P22680 504 aa28.28■■■□□ 2.12
RAB40C-212ENST00000569575 DLGAP5Q15398 846 aa28.28■■■□□ 2.12
RAB40C-212ENST00000569575 MYOZ2Q9NPC6 264 aa28.28■■■□□ 2.12
RAB40C-212ENST00000569575 ADARB2Q9NS39 739 aaKnown RBP28.28■■■□□ 2.12
RAB40C-212ENST00000569575 ZNF532Q9HCE3 1301 aa28.27■■■□□ 2.12
RAB40C-212ENST00000569575 TCRBV5S4A2TA0A5A2 114 aa28.27■■■□□ 2.12
RAB40C-212ENST00000569575 DIAPH3Q9NSV4 1193 aa28.27■■■□□ 2.12
RAB40C-212ENST00000569575 MYO1BO43795 1136 aa28.26■■■□□ 2.11
RAB40C-212ENST00000569575 MFAP1P55081 439 aaKnown RBP28.26■■■□□ 2.11
RAB40C-212ENST00000569575 ZMYM1Q5SVZ6 1142 aa28.26■■■□□ 2.11
RAB40C-212ENST00000569575 USP50Q70EL3 339 aaPredicted RBP28.26■■■□□ 2.11
RAB40C-212ENST00000569575 PNMA8AQ86V59 439 aaPredicted RBP28.26■■■□□ 2.11
RAB40C-212ENST00000569575 ZNF384Q8TF68 577 aa28.26■■■□□ 2.11
RAB40C-212ENST00000569575 VEGFAP15692 232 aaPredicted RBP28.25■■■□□ 2.11
RAB40C-212ENST00000569575 CFAP100Q494V2 611 aa28.25■■■□□ 2.11
RAB40C-212ENST00000569575 ZBED3Q96IU2 234 aaPredicted RBP28.25■■■□□ 2.11
RAB40C-212ENST00000569575 DAGLAQ9Y4D2 1042 aa28.25■■■□□ 2.11
RAB40C-212ENST00000569575 RAD50Q92878 1312 aa28.24■■■□□ 2.11
RAB40C-212ENST00000569575 SPDYE2BA6NHP3 402 aa28.24■■■□□ 2.11
RAB40C-212ENST00000569575 CDC45O75419 566 aa28.24■■■□□ 2.11
RAB40C-212ENST00000569575 SPDYE6P0CI01 402 aa28.24■■■□□ 2.11
RAB40C-212ENST00000569575 RBM5P52756 815 aaKnown RBP eCLIP28.24■■■□□ 2.11
RAB40C-212ENST00000569575 DIXDC1Q155Q3 683 aa28.24■■■□□ 2.11
RAB40C-212ENST00000569575 CHMLP26374 656 aa28.23■■■□□ 2.11
RAB40C-212ENST00000569575 ZC3H15Q8WU90 426 aaKnown RBP28.23■■■□□ 2.11
RAB40C-212ENST00000569575 MAGEB6P1A0A0J9YX57 407 aa28.22■■■□□ 2.11
RAB40C-212ENST00000569575 GNAT2P19087 354 aa28.22■■■□□ 2.11
RAB40C-212ENST00000569575 EPS15P42566 896 aa28.22■■■□□ 2.11
RAB40C-212ENST00000569575 KIF4BQ2VIQ3 1234 aa28.22■■■□□ 2.11
RAB40C-212ENST00000569575 MCMDC2Q4G0Z9 681 aa28.22■■■□□ 2.11
RAB40C-212ENST00000569575 FKBP1CQ5VVH2 108 aa28.22■■■□□ 2.11
RAB40C-212ENST00000569575 APOBEC3HQ6NTF7 200 aaKnown RBP28.22■■■□□ 2.11
RAB40C-212ENST00000569575 NPM3O75607 178 aaKnown RBP28.21■■■□□ 2.11
RAB40C-212ENST00000569575 EPHX2P34913 555 aa28.21■■■□□ 2.11
RAB40C-212ENST00000569575 AIDAQ96BJ3 306 aa28.21■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms