RNA–Protein interactions for RNA: ENST00000569357.4

TCF4-243, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 585 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-243ENST00000569357 ZNF804BA4D1E1 1349 aa11.77□□□□□ -0.53
TCF4-243ENST00000569357 TLR2O60603 784 aa11.76□□□□□ -0.53
TCF4-243ENST00000569357 GNRH1P01148 92 aa11.76□□□□□ -0.53
TCF4-243ENST00000569357 PCCAP05165 728 aaPredicted RBP11.76□□□□□ -0.53
TCF4-243ENST00000569357 GJB1P08034 283 aa11.76□□□□□ -0.53
TCF4-243ENST00000569357 KLRK1P26718 216 aa11.76□□□□□ -0.53
TCF4-243ENST00000569357 GRK4P32298 578 aa11.76□□□□□ -0.53
TCF4-243ENST00000569357 KCNJ4P48050 445 aa11.76□□□□□ -0.53
TCF4-243ENST00000569357 PRMT2P55345 433 aa11.76□□□□□ -0.53
TCF4-243ENST00000569357 GOLGA2Q08379 1002 aa11.76□□□□□ -0.53
TCF4-243ENST00000569357 MMRN1Q13201 1228 aa11.76□□□□□ -0.53
TCF4-243ENST00000569357 PRMT6Q96LA8 375 aaPredicted RBP11.76□□□□□ -0.53
TCF4-243ENST00000569357 BSDC1Q9NW68 430 aaPredicted RBP11.76□□□□□ -0.53
TCF4-243ENST00000569357 HYPKQ9NX55 129 aa11.76□□□□□ -0.53
TCF4-243ENST00000569357 STXBP5LQ9Y2K9 1186 aa11.76□□□□□ -0.53
TCF4-243ENST00000569357 CEP290O15078 2479 aa11.76□□□□□ -0.53
TCF4-243ENST00000569357 FMNL1O95466 1100 aaPredicted RBP11.75□□□□□ -0.53
TCF4-243ENST00000569357 HOXD10P28358 340 aa11.75□□□□□ -0.53
TCF4-243ENST00000569357 PSMC4P43686 418 aa11.75□□□□□ -0.53
TCF4-243ENST00000569357 UBXN2AP68543 259 aa11.75□□□□□ -0.53
TCF4-243ENST00000569357 NEUROD2Q15784 382 aa11.75□□□□□ -0.53
TCF4-243ENST00000569357 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.75□□□□□ -0.53
TCF4-243ENST00000569357 UBE2Q1Q7Z7E8 422 aa11.75□□□□□ -0.53
TCF4-243ENST00000569357 U2AF1L4Q8WU68 220 aaKnown RBP11.75□□□□□ -0.53
TCF4-243ENST00000569357 TRIM47Q96LD4 638 aa11.75□□□□□ -0.53
TCF4-243ENST00000569357 CWC25Q9NXE8 425 aaPredicted RBP11.75□□□□□ -0.53
TCF4-243ENST00000569357 SRRDQ9UH36 339 aa11.75□□□□□ -0.53
TCF4-243ENST00000569357 LEMD3Q9Y2U8 911 aa11.75□□□□□ -0.53
TCF4-243ENST00000569357 RIPOR2Q9Y4F9 1068 aa11.75□□□□□ -0.53
TCF4-243ENST00000569357 CSADQ9Y600 493 aa11.75□□□□□ -0.53
TCF4-243ENST00000569357 CTSWP56202 376 aa11.74□□□□□ -0.53
TCF4-243ENST00000569357 MAP3K9P80192 1104 aa11.74□□□□□ -0.53
TCF4-243ENST00000569357 VGLL4Q14135 290 aa11.74□□□□□ -0.53
TCF4-243ENST00000569357 SPNS2Q8IVW8 549 aa11.74□□□□□ -0.53
TCF4-243ENST00000569357 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.74□□□□□ -0.53
TCF4-243ENST00000569357 CERS5Q8N5B7 392 aa11.74□□□□□ -0.53
TCF4-243ENST00000569357 MTMR14Q8NCE2 650 aa11.74□□□□□ -0.53
TCF4-243ENST00000569357 CCDC191Q8NCU4 936 aa11.74□□□□□ -0.53
TCF4-243ENST00000569357 GREM2Q9H772 168 aa11.74□□□□□ -0.53
TCF4-243ENST00000569357 CPA4Q9UI42 421 aa11.74□□□□□ -0.53
TCF4-243ENST00000569357 JAG2Q9Y219 1238 aa11.74□□□□□ -0.53
TCF4-243ENST00000569357 AOX1Q06278 1338 aa11.74□□□□□ -0.53
TCF4-243ENST00000569357 CETPP11597 493 aa11.73□□□□□ -0.53
TCF4-243ENST00000569357 OSBPP22059 807 aa11.73□□□□□ -0.53
TCF4-243ENST00000569357 IGHMBP2P38935 993 aaKnown RBP11.73□□□□□ -0.53
TCF4-243ENST00000569357 LMOD3Q0VAK6 560 aa11.73□□□□□ -0.53
TCF4-243ENST00000569357 TRIM26Q12899 539 aaPredicted RBP11.73□□□□□ -0.53
TCF4-243ENST00000569357 MYPNQ86TC9 1320 aa11.73□□□□□ -0.53
TCF4-243ENST00000569357 CD209Q9NNX6 404 aa11.73□□□□□ -0.53
TCF4-243ENST00000569357 ZSWIM8A7E2V4 1837 aa11.72□□□□□ -0.53
TCF4-243ENST00000569357 BTBD19C9JJ37 291 aa11.72□□□□□ -0.53
TCF4-243ENST00000569357 TFRCP02786 760 aaKnown RBP11.72□□□□□ -0.53
TCF4-243ENST00000569357 CTGFP29279 349 aa11.72□□□□□ -0.53
TCF4-243ENST00000569357 TNFAIP1Q13829 316 aa11.72□□□□□ -0.53
TCF4-243ENST00000569357 TTLL11Q8NHH1 800 aa11.72□□□□□ -0.53
TCF4-243ENST00000569357 UNC93B1Q9H1C4 597 aa11.72□□□□□ -0.53
TCF4-243ENST00000569357 PHAXQ9H814 394 aaKnown RBP11.72□□□□□ -0.53
TCF4-243ENST00000569357 MTMR10Q9NXD2 777 aa11.72□□□□□ -0.53
TCF4-243ENST00000569357 ZMYND8Q9ULU4 1186 aaPredicted RBP11.72□□□□□ -0.53
TCF4-243ENST00000569357 TCP10L2B9ZVM9 353 aa11.71□□□□□ -0.53
TCF4-243ENST00000569357 CHL1O00533 1208 aa11.71□□□□□ -0.53
TCF4-243ENST00000569357 SGPL1O95470 568 aa11.71□□□□□ -0.53
TCF4-243ENST00000569357 TMPOP42166 694 aaKnown RBP11.71□□□□□ -0.53
TCF4-243ENST00000569357 DUSP27Q5VZP5 1158 aa11.71□□□□□ -0.53
TCF4-243ENST00000569357 GPR153Q6NV75 609 aa11.71□□□□□ -0.53
TCF4-243ENST00000569357 HELBQ8NG08 1087 aaPredicted RBP11.71□□□□□ -0.53
TCF4-243ENST00000569357 MPHOSPH8Q99549 860 aa11.71□□□□□ -0.53
TCF4-243ENST00000569357 ANKRD2Q9GZV1 360 aa11.71□□□□□ -0.53
TCF4-243ENST00000569357 TDRD3Q9H7E2 651 aaKnown RBP11.71□□□□□ -0.53
TCF4-243ENST00000569357 HOXB7P09629 217 aa11.7□□□□□ -0.54
TCF4-243ENST00000569357 BCAMP50895 628 aa11.7□□□□□ -0.54
TCF4-243ENST00000569357 SNAPC2Q13487 334 aa11.7□□□□□ -0.54
TCF4-243ENST00000569357 C7orf61Q8IZ16 206 aa11.7□□□□□ -0.54
TCF4-243ENST00000569357 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.7□□□□□ -0.54
TCF4-243ENST00000569357 DEFB118Q96PH6 123 aa11.7□□□□□ -0.54
TCF4-243ENST00000569357 TMEM39BQ9GZU3 492 aa11.7□□□□□ -0.54
TCF4-243ENST00000569357 ZNF70Q9UC06 446 aaPredicted RBP11.7□□□□□ -0.54
TCF4-243ENST00000569357 COL6A3P12111 3177 aa11.69□□□□□ -0.54
TCF4-243ENST00000569357 SPDYE5A6NIY4 337 aa11.69□□□□□ -0.54
TCF4-243ENST00000569357 SNAP23O00161 211 aa11.69□□□□□ -0.54
TCF4-243ENST00000569357 IRF6O14896 467 aa11.69□□□□□ -0.54
TCF4-243ENST00000569357 SYN1P17600 705 aa11.69□□□□□ -0.54
TCF4-243ENST00000569357 PRKCZQ05513 592 aa11.69□□□□□ -0.54
TCF4-243ENST00000569357 C17orf99Q6UX52 265 aa11.69□□□□□ -0.54
TCF4-243ENST00000569357 ERO1BQ86YB8 467 aa11.69□□□□□ -0.54
TCF4-243ENST00000569357 PAWRQ96IZ0 340 aaKnown RBP11.69□□□□□ -0.54
TCF4-243ENST00000569357 GDF15Q99988 308 aa11.69□□□□□ -0.54
TCF4-243ENST00000569357 ZCCHC17Q9NP64 241 aaKnown RBP11.69□□□□□ -0.54
TCF4-243ENST00000569357 LAMB1P07942 1786 aa11.69□□□□□ -0.54
TCF4-243ENST00000569357 ZNF646O15015 1829 aaPredicted RBP11.68□□□□□ -0.54
TCF4-243ENST00000569357 ELL2O00472 640 aaPredicted RBP11.68□□□□□ -0.54
TCF4-243ENST00000569357 TAF5LO75529 589 aa11.68□□□□□ -0.54
TCF4-243ENST00000569357 PLCG2P16885 1265 aa11.68□□□□□ -0.54
TCF4-243ENST00000569357 BMP8BP34820 402 aa11.68□□□□□ -0.54
TCF4-243ENST00000569357 TNNI2P48788 182 aa11.68□□□□□ -0.54
TCF4-243ENST00000569357 CHRNDQ07001 517 aa11.68□□□□□ -0.54
TCF4-243ENST00000569357 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.68□□□□□ -0.54
TCF4-243ENST00000569357 ZKSCAN4Q969J2 545 aaPredicted RBP11.68□□□□□ -0.54
TCF4-243ENST00000569357 METTL22Q9BUU2 404 aaPredicted RBP11.68□□□□□ -0.54
TCF4-243ENST00000569357 TAOK2Q9UL54 1235 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms