RNA–Protein interactions for RNA: ENST00000569337.1

UBR1-210, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 5

Gene UBR1, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-210ENST00000569337 G3BP1Q13283 466 aaKnown RBP eCLIP11.57□□□□□ -0.56
UBR1-210ENST00000569337 RGMBQ6NW40 437 aa11.57□□□□□ -0.56
UBR1-210ENST00000569337 PRMT6Q96LA8 375 aaPredicted RBP11.57□□□□□ -0.56
UBR1-210ENST00000569337 DCTPP1Q9H773 170 aa11.57□□□□□ -0.56
UBR1-210ENST00000569337 WBP1LQ9NX94 342 aa11.57□□□□□ -0.56
UBR1-210ENST00000569337 SERPINA10Q9UK55 444 aa11.57□□□□□ -0.56
UBR1-210ENST00000569337 EXOC6BQ9Y2D4 811 aa11.57□□□□□ -0.56
UBR1-210ENST00000569337 AKAP2Q9Y2D5 859 aa11.57□□□□□ -0.56
UBR1-210ENST00000569337 PCDHAC2Q9Y5I4 1007 aa11.57□□□□□ -0.56
UBR1-210ENST00000569337 CLRN2A0PK11 232 aa11.56□□□□□ -0.56
UBR1-210ENST00000569337 AOC2O75106 756 aa11.56□□□□□ -0.56
UBR1-210ENST00000569337 SURF6O75683 361 aaKnown RBP11.56□□□□□ -0.56
UBR1-210ENST00000569337 ZNF157P51786 506 aaPredicted RBP11.56□□□□□ -0.56
UBR1-210ENST00000569337 TIMM10P62072 90 aa11.56□□□□□ -0.56
UBR1-210ENST00000569337 TFCP2Q12800 502 aa11.56□□□□□ -0.56
UBR1-210ENST00000569337 TTLL12Q14166 644 aaPredicted RBP11.56□□□□□ -0.56
UBR1-210ENST00000569337 WDR66Q8TBY9 1149 aa11.56□□□□□ -0.56
UBR1-210ENST00000569337 CCDC136Q96JN2 1154 aa11.56□□□□□ -0.56
UBR1-210ENST00000569337 BEGAINQ9BUH8 593 aa11.56□□□□□ -0.56
UBR1-210ENST00000569337 DEFB129Q9H1M3 183 aa11.56□□□□□ -0.56
UBR1-210ENST00000569337 RWDD1Q9H446 243 aaPredicted RBP11.56□□□□□ -0.56
UBR1-210ENST00000569337 VEZTQ9HBM0 779 aa11.56□□□□□ -0.56
UBR1-210ENST00000569337 FOXN1O15353 648 aa11.55□□□□□ -0.56
UBR1-210ENST00000569337 CRKP46108 304 aa11.55□□□□□ -0.56
UBR1-210ENST00000569337 HDLBPQ00341 1268 aaKnown RBP11.55□□□□□ -0.56
UBR1-210ENST00000569337 NOGQ13253 232 aa11.55□□□□□ -0.56
UBR1-210ENST00000569337 GRIK5Q16478 980 aa11.55□□□□□ -0.56
UBR1-210ENST00000569337 SMC5Q8IY18 1101 aa11.55□□□□□ -0.56
UBR1-210ENST00000569337 CCDC102AQ96A19 550 aa11.55□□□□□ -0.56
UBR1-210ENST00000569337 SUGT1Q9Y2Z0 365 aa11.55□□□□□ -0.56
UBR1-210ENST00000569337 PSME4Q14997 1843 aa11.55□□□□□ -0.56
UBR1-210ENST00000569337 PCNTO95613 3336 aa11.54□□□□□ -0.56
UBR1-210ENST00000569337 A0A1B0GUL7 405 aa11.54□□□□□ -0.56
UBR1-210ENST00000569337 UBE2Q2LH0YL09 131 aa11.54□□□□□ -0.56
UBR1-210ENST00000569337 APBB1O00213 710 aa11.54□□□□□ -0.56
UBR1-210ENST00000569337 ADORA1P30542 326 aa11.54□□□□□ -0.56
UBR1-210ENST00000569337 PHKA1P46020 1223 aa11.54□□□□□ -0.56
UBR1-210ENST00000569337 CTCFP49711 727 aaPredicted RBP11.54□□□□□ -0.56
UBR1-210ENST00000569337 CCDC102BQ68D86 513 aa11.54□□□□□ -0.56
UBR1-210ENST00000569337 TEKT1Q969V4 418 aa11.54□□□□□ -0.56
UBR1-210ENST00000569337 NEUROD6Q96NK8 337 aa11.54□□□□□ -0.56
UBR1-210ENST00000569337 MRIQ9BWK5 157 aa11.54□□□□□ -0.56
UBR1-210ENST00000569337 TDRD3Q9H7E2 651 aaKnown RBP11.54□□□□□ -0.56
UBR1-210ENST00000569337 DENND2AQ9ULE3 1009 aa11.54□□□□□ -0.56
UBR1-210ENST00000569337 PPP2R3BQ9Y5P8 575 aa11.54□□□□□ -0.56
UBR1-210ENST00000569337 MAST3O60307 1309 aa11.54□□□□□ -0.56
UBR1-210ENST00000569337 SEMA3EO15041 775 aa11.53□□□□□ -0.56
UBR1-210ENST00000569337 SMARCA5O60264 1052 aaPredicted RBP11.53□□□□□ -0.56
UBR1-210ENST00000569337 OS9Q13438 667 aaPredicted RBP11.53□□□□□ -0.56
UBR1-210ENST00000569337 TNFAIP1Q13829 316 aa11.53□□□□□ -0.56
UBR1-210ENST00000569337 PRKG1Q13976 671 aa11.53□□□□□ -0.56
UBR1-210ENST00000569337 SUPT20HL1Q3ZLR7 823 aa11.53□□□□□ -0.56
UBR1-210ENST00000569337 GORABQ5T7V8 394 aa11.53□□□□□ -0.56
UBR1-210ENST00000569337 COL13A1Q5TAT6 717 aaPredicted RBP11.53□□□□□ -0.56
UBR1-210ENST00000569337 MOB2Q70IA6 237 aa11.53□□□□□ -0.56
UBR1-210ENST00000569337 ARMC9Q7Z3E5 817 aa11.53□□□□□ -0.56
UBR1-210ENST00000569337 XAGE2Q96GT9 111 aa11.53□□□□□ -0.56
UBR1-210ENST00000569337 ZNF70Q9UC06 446 aaPredicted RBP11.53□□□□□ -0.56
UBR1-210ENST00000569337 FAM155AB1AL88 458 aaPredicted RBP11.52□□□□□ -0.57
UBR1-210ENST00000569337 PPP1R12BO60237 982 aaPredicted RBP11.52□□□□□ -0.57
UBR1-210ENST00000569337 LDHBP07195 334 aaKnown RBP11.52□□□□□ -0.57
UBR1-210ENST00000569337 RASA3Q14644 834 aa11.52□□□□□ -0.57
UBR1-210ENST00000569337 SPDYE2Q495Y8 402 aa11.52□□□□□ -0.57
UBR1-210ENST00000569337 SKAP1Q86WV1 359 aa11.52□□□□□ -0.57
UBR1-210ENST00000569337 RHPN1Q8TCX5 695 aa11.52□□□□□ -0.57
UBR1-210ENST00000569337 GCC1Q96CN9 775 aa11.52□□□□□ -0.57
UBR1-210ENST00000569337 TRPM7Q96QT4 1865 aa11.52□□□□□ -0.57
UBR1-210ENST00000569337 AOX1Q06278 1338 aa11.52□□□□□ -0.57
UBR1-210ENST00000569337 COL1A1P02452 1464 aaPredicted RBP11.51□□□□□ -0.57
UBR1-210ENST00000569337 TCP10L2B9ZVM9 353 aa11.51□□□□□ -0.57
UBR1-210ENST00000569337 SLC10A3P09131 477 aa11.51□□□□□ -0.57
UBR1-210ENST00000569337 PRDX5P30044 214 aa11.51□□□□□ -0.57
UBR1-210ENST00000569337 TNNI2P48788 182 aa11.51□□□□□ -0.57
UBR1-210ENST00000569337 LBX1P52954 281 aa11.51□□□□□ -0.57
UBR1-210ENST00000569337 KIF23Q02241 960 aaPredicted RBP11.51□□□□□ -0.57
UBR1-210ENST00000569337 HHIPL2Q6UWX4 724 aa11.51□□□□□ -0.57
UBR1-210ENST00000569337 ZGPATQ8N5A5 531 aaKnown RBP11.51□□□□□ -0.57
UBR1-210ENST00000569337 ZDHHC15Q96MV8 337 aa11.51□□□□□ -0.57
UBR1-210ENST00000569337 ZIC5Q96T25 663 aa11.51□□□□□ -0.57
UBR1-210ENST00000569337 IL1RAPL2Q9NP60 686 aa11.51□□□□□ -0.57
UBR1-210ENST00000569337 PRDM10Q9NQV6 1147 aa11.51□□□□□ -0.57
UBR1-210ENST00000569337 TMOD2Q9NZR1 351 aa11.51□□□□□ -0.57
UBR1-210ENST00000569337 ANGEL1Q9UNK9 670 aaKnown RBP11.51□□□□□ -0.57
UBR1-210ENST00000569337 ZNF646O15015 1829 aaPredicted RBP11.51□□□□□ -0.57
UBR1-210ENST00000569337 ARAP2Q8WZ64 1704 aa11.5□□□□□ -0.57
UBR1-210ENST00000569337 ZBTB22O15209 634 aa11.5□□□□□ -0.57
UBR1-210ENST00000569337 CA12O43570 354 aa11.5□□□□□ -0.57
UBR1-210ENST00000569337 RAB11FIP3O75154 756 aa11.5□□□□□ -0.57
UBR1-210ENST00000569337 NPM3O75607 178 aaKnown RBP11.5□□□□□ -0.57
UBR1-210ENST00000569337 NUCB1Q02818 461 aa11.5□□□□□ -0.57
UBR1-210ENST00000569337 RASGRF1Q13972 1273 aa11.5□□□□□ -0.57
UBR1-210ENST00000569337 HSP90AB4PQ58FF6 505 aa11.5□□□□□ -0.57
UBR1-210ENST00000569337 NBPF12Q5TAG4 269 aaPredicted RBP11.5□□□□□ -0.57
UBR1-210ENST00000569337 ANKRD45Q5TZF3 282 aa11.5□□□□□ -0.57
UBR1-210ENST00000569337 APOBEC3HQ6NTF7 200 aaKnown RBP11.5□□□□□ -0.57
UBR1-210ENST00000569337 CENPQQ7L2Z9 268 aaPredicted RBP11.5□□□□□ -0.57
UBR1-210ENST00000569337 RASAL3Q86YV0 1011 aa11.5□□□□□ -0.57
UBR1-210ENST00000569337 EAF2Q96CJ1 260 aaPredicted RBP11.5□□□□□ -0.57
UBR1-210ENST00000569337 LRRCC1Q9C099 1032 aa11.5□□□□□ -0.57
UBR1-210ENST00000569337 GPR108Q9NPR9 543 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms