RNA–Protein interactions for RNA: ENST00000569252.5

USB1-215, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 573 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-215ENST00000569252 USP17L3A6NCW0 530 aa19.54■□□□□ 0.72
USB1-215ENST00000569252 USP17L4A6NCW7 530 aa19.54■□□□□ 0.72
USB1-215ENST00000569252 ADM5C9JUS6 153 aa19.54■□□□□ 0.72
USB1-215ENST00000569252 CHAF1AQ13111 956 aaPredicted RBP19.54■□□□□ 0.72
USB1-215ENST00000569252 USP17L1Q7RTZ2 530 aa19.54■□□□□ 0.72
USB1-215ENST00000569252 TDRD7Q8NHU6 1098 aaKnown RBP19.54■□□□□ 0.72
USB1-215ENST00000569252 TLR7Q9NYK1 1049 aaKnown RBP19.54■□□□□ 0.72
USB1-215ENST00000569252 IQSEC3Q9UPP2 1182 aaPredicted RBP19.54■□□□□ 0.72
USB1-215ENST00000569252 ASTN2O75129 1339 aaPredicted RBP19.53■□□□□ 0.72
USB1-215ENST00000569252 IRS2Q9Y4H2 1338 aa19.53■□□□□ 0.72
USB1-215ENST00000569252 PSMD14O00487 310 aa19.53■□□□□ 0.72
USB1-215ENST00000569252 MX1P20591 662 aa19.53■□□□□ 0.72
USB1-215ENST00000569252 GTF2IP78347 998 aa19.53■□□□□ 0.72
USB1-215ENST00000569252 RBM26Q5T8P6 1007 aaKnown RBP19.53■□□□□ 0.72
USB1-215ENST00000569252 ZNF512BQ96KM6 892 aaPredicted RBP19.53■□□□□ 0.72
USB1-215ENST00000569252 PGAP2Q9UHJ9 254 aa19.53■□□□□ 0.72
USB1-215ENST00000569252 TTC41PQ6P2S7 1318 aa19.52■□□□□ 0.72
USB1-215ENST00000569252 MAP2K2P36507 400 aa19.52■□□□□ 0.72
USB1-215ENST00000569252 STRIP1Q5VSL9 837 aa19.52■□□□□ 0.72
USB1-215ENST00000569252 ZGPATQ8N5A5 531 aaKnown RBP19.52■□□□□ 0.72
USB1-215ENST00000569252 WDR66Q8TBY9 1149 aa19.52■□□□□ 0.72
USB1-215ENST00000569252 TBC1D22AQ8WUA7 517 aa19.52■□□□□ 0.72
USB1-215ENST00000569252 SLC34A2O95436 690 aa19.51■□□□□ 0.71
USB1-215ENST00000569252 ATP5JP18859 108 aa19.51■□□□□ 0.71
USB1-215ENST00000569252 ARID4AP29374 1257 aaPredicted RBP19.51■□□□□ 0.71
USB1-215ENST00000569252 HUNKP57058 714 aa19.51■□□□□ 0.71
USB1-215ENST00000569252 MLLT1Q03111 559 aaPredicted RBP19.51■□□□□ 0.71
USB1-215ENST00000569252 SPATA5Q8NB90 893 aa19.51■□□□□ 0.71
USB1-215ENST00000569252 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.51■□□□□ 0.71
USB1-215ENST00000569252 SCN9AQ15858 1988 aa19.5■□□□□ 0.71
USB1-215ENST00000569252 TNRC18O15417 2968 aaPredicted RBP19.5■□□□□ 0.71
USB1-215ENST00000569252 GLRX3O76003 335 aaKnown RBP19.5■□□□□ 0.71
USB1-215ENST00000569252 DGKZQ13574 1117 aa19.5■□□□□ 0.71
USB1-215ENST00000569252 SPTY2D1Q68D10 685 aaPredicted RBP19.5■□□□□ 0.71
USB1-215ENST00000569252 BOLA2Q9H3K6 86 aa19.5■□□□□ 0.71
USB1-215ENST00000569252 CDC37L1Q7L3B6 337 aa19.49■□□□□ 0.71
USB1-215ENST00000569252 SCAF8Q9UPN6 1271 aaKnown RBP19.49■□□□□ 0.71
USB1-215ENST00000569252 A0A1B0GUL6 1792 aa19.49■□□□□ 0.71
USB1-215ENST00000569252 MYO3BQ8WXR4 1341 aa19.49■□□□□ 0.71
USB1-215ENST00000569252 ZBTB22O15209 634 aa19.48■□□□□ 0.71
USB1-215ENST00000569252 VIL1P09327 827 aaKnown RBP19.48■□□□□ 0.71
USB1-215ENST00000569252 PDE1AP54750 535 aa19.48■□□□□ 0.71
USB1-215ENST00000569252 RASGRF1Q13972 1273 aa19.48■□□□□ 0.71
USB1-215ENST00000569252 TTF1Q15361 905 aaPredicted RBP19.48■□□□□ 0.71
USB1-215ENST00000569252 DNAJC2Q99543 621 aaKnown RBP19.48■□□□□ 0.71
USB1-215ENST00000569252 SNRKQ9NRH2 765 aa19.48■□□□□ 0.71
USB1-215ENST00000569252 HMG20BQ9P0W2 317 aa19.48■□□□□ 0.71
USB1-215ENST00000569252 ABCF2Q9UG63 623 aa19.48■□□□□ 0.71
USB1-215ENST00000569252 STAP2Q9UGK3 403 aa19.48■□□□□ 0.71
USB1-215ENST00000569252 JAG2Q9Y219 1238 aa19.48■□□□□ 0.71
USB1-215ENST00000569252 FAM205AQ6ZU69 1335 aa19.48■□□□□ 0.71
USB1-215ENST00000569252 FAM155AB1AL88 458 aaPredicted RBP19.47■□□□□ 0.71
USB1-215ENST00000569252 H7C1D1 291 aa19.47■□□□□ 0.71
USB1-215ENST00000569252 MCAMP43121 646 aa19.47■□□□□ 0.71
USB1-215ENST00000569252 FKBP1AP62942 108 aaKnown RBP19.47■□□□□ 0.71
USB1-215ENST00000569252 MFSD14BQ5SR56 506 aa19.47■□□□□ 0.71
USB1-215ENST00000569252 RSBN1LQ6PCB5 846 aaPredicted RBP19.47■□□□□ 0.71
USB1-215ENST00000569252 OGFOD1Q8N543 542 aa19.47■□□□□ 0.71
USB1-215ENST00000569252 OTUD7AQ8TE49 926 aaPredicted RBP19.47■□□□□ 0.71
USB1-215ENST00000569252 LRP2BPQ9P2M1 347 aa19.47■□□□□ 0.71
USB1-215ENST00000569252 HDAC9Q9UKV0 1011 aa19.47■□□□□ 0.71
USB1-215ENST00000569252 PDS5AQ29RF7 1337 aaKnown RBP19.47■□□□□ 0.71
USB1-215ENST00000569252 RPS12P25398 132 aaKnown RBP19.46■□□□□ 0.71
USB1-215ENST00000569252 ERICH6Q7L0X2 663 aa19.46■□□□□ 0.71
USB1-215ENST00000569252 KRT26Q7Z3Y9 468 aa19.46■□□□□ 0.71
USB1-215ENST00000569252 PLEKHM2Q8IWE5 1019 aa19.46■□□□□ 0.71
USB1-215ENST00000569252 AGBL3Q8NEM8 1001 aa19.46■□□□□ 0.71
USB1-215ENST00000569252 HAUS7Q99871 368 aa19.46■□□□□ 0.71
USB1-215ENST00000569252 SUGT1Q9Y2Z0 365 aa19.46■□□□□ 0.71
USB1-215ENST00000569252 AOX1Q06278 1338 aa19.46■□□□□ 0.71
USB1-215ENST00000569252 LDHBP07195 334 aaKnown RBP19.45■□□□□ 0.7
USB1-215ENST00000569252 ZAP70P43403 619 aa19.45■□□□□ 0.7
USB1-215ENST00000569252 RGS19P49795 217 aa19.45■□□□□ 0.7
USB1-215ENST00000569252 MMP14P50281 582 aa19.45■□□□□ 0.7
USB1-215ENST00000569252 DACT2Q5SW24 774 aa19.45■□□□□ 0.7
USB1-215ENST00000569252 TSHZ3Q63HK5 1081 aa19.45■□□□□ 0.7
USB1-215ENST00000569252 ZC3H15Q8WU90 426 aaKnown RBP19.45■□□□□ 0.7
USB1-215ENST00000569252 OSBPL3Q9H4L5 887 aa19.45■□□□□ 0.7
USB1-215ENST00000569252 TRIM6-TRIM34B2RNG4 842 aa19.44■□□□□ 0.7
USB1-215ENST00000569252 GOLIM4O00461 696 aa19.44■□□□□ 0.7
USB1-215ENST00000569252 RGS3P49796 1198 aa19.44■□□□□ 0.7
USB1-215ENST00000569252 SOX10P56693 466 aa19.44■□□□□ 0.7
USB1-215ENST00000569252 KIF23Q02241 960 aaPredicted RBP19.44■□□□□ 0.7
USB1-215ENST00000569252 SCARF1Q14162 830 aa19.44■□□□□ 0.7
USB1-215ENST00000569252 LRRFIP1Q32MZ4 808 aaKnown RBP19.44■□□□□ 0.7
USB1-215ENST00000569252 SLF2Q8IX21 1173 aa19.44■□□□□ 0.7
USB1-215ENST00000569252 PAG1Q9NWQ8 432 aa19.44■□□□□ 0.7
USB1-215ENST00000569252 RAI14Q9P0K7 980 aa19.44■□□□□ 0.7
USB1-215ENST00000569252 ARAP2Q8WZ64 1704 aa19.43■□□□□ 0.7
USB1-215ENST00000569252 F8W031 263 aaPredicted RBP19.43■□□□□ 0.7
USB1-215ENST00000569252 IGSF3O75054 1194 aa19.43■□□□□ 0.7
USB1-215ENST00000569252 PDE4AP27815 886 aa19.43■□□□□ 0.7
USB1-215ENST00000569252 MAP3K12Q12852 859 aa19.43■□□□□ 0.7
USB1-215ENST00000569252 DZIP1Q86YF9 867 aaKnown RBP19.43■□□□□ 0.7
USB1-215ENST00000569252 DPF2Q92785 391 aa19.43■□□□□ 0.7
USB1-215ENST00000569252 HHIPL1Q96JK4 782 aa19.43■□□□□ 0.7
USB1-215ENST00000569252 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.43■□□□□ 0.7
USB1-215ENST00000569252 GBA2Q9HCG7 927 aaPredicted RBP19.43■□□□□ 0.7
USB1-215ENST00000569252 GGA3Q9NZ52 723 aa19.43■□□□□ 0.7
USB1-215ENST00000569252 SALL1Q9NSC2 1324 aa19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms