RNA–Protein interactions for RNA: ENST00000569245.5

COMMD4-225, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-225ENST00000569245 FKBP1BP68106 108 aa17.87■□□□□ 0.45
COMMD4-225ENST00000569245 ATP8B2P98198 1209 aa17.87■□□□□ 0.45
COMMD4-225ENST00000569245 OS9Q13438 667 aaPredicted RBP17.87■□□□□ 0.45
COMMD4-225ENST00000569245 GRIK5Q16478 980 aa17.87■□□□□ 0.45
COMMD4-225ENST00000569245 CCDC102AQ96A19 550 aa17.87■□□□□ 0.45
COMMD4-225ENST00000569245 WBP1LQ9NX94 342 aa17.87■□□□□ 0.45
COMMD4-225ENST00000569245 DDX19BQ9UMR2 479 aa17.87■□□□□ 0.45
COMMD4-225ENST00000569245 ZNF646O15015 1829 aaPredicted RBP17.86■□□□□ 0.45
COMMD4-225ENST00000569245 POLR2AP24928 1970 aaKnown RBP17.86■□□□□ 0.45
COMMD4-225ENST00000569245 A0A1B0GUL7 405 aa17.86■□□□□ 0.45
COMMD4-225ENST00000569245 FOXN1O15353 648 aa17.86■□□□□ 0.45
COMMD4-225ENST00000569245 PHKA1P46020 1223 aa17.86■□□□□ 0.45
COMMD4-225ENST00000569245 AAMPQ13685 434 aa17.86■□□□□ 0.45
COMMD4-225ENST00000569245 PRKG1Q13976 671 aa17.86■□□□□ 0.45
COMMD4-225ENST00000569245 GORABQ5T7V8 394 aa17.86■□□□□ 0.45
COMMD4-225ENST00000569245 MOB2Q70IA6 237 aa17.86■□□□□ 0.45
COMMD4-225ENST00000569245 TEKT1Q969V4 418 aa17.86■□□□□ 0.45
COMMD4-225ENST00000569245 UBE2Q2LH0YL09 131 aa17.85■□□□□ 0.45
COMMD4-225ENST00000569245 AOX1Q06278 1338 aa17.85■□□□□ 0.45
COMMD4-225ENST00000569245 NOGQ13253 232 aa17.85■□□□□ 0.45
COMMD4-225ENST00000569245 CCDC102BQ68D86 513 aa17.85■□□□□ 0.45
COMMD4-225ENST00000569245 XAGE2Q96GT9 111 aa17.85■□□□□ 0.45
COMMD4-225ENST00000569245 TDRD3Q9H7E2 651 aaKnown RBP17.85■□□□□ 0.45
COMMD4-225ENST00000569245 ZNF70Q9UC06 446 aaPredicted RBP17.85■□□□□ 0.45
COMMD4-225ENST00000569245 DENND2AQ9ULE3 1009 aa17.85■□□□□ 0.45
COMMD4-225ENST00000569245 SUGT1Q9Y2Z0 365 aa17.85■□□□□ 0.45
COMMD4-225ENST00000569245 MAST3O60307 1309 aa17.84■□□□□ 0.45
COMMD4-225ENST00000569245 SEMA3EO15041 775 aa17.84■□□□□ 0.45
COMMD4-225ENST00000569245 SURF6O75683 361 aaKnown RBP17.84■□□□□ 0.45
COMMD4-225ENST00000569245 CTCFP49711 727 aaPredicted RBP17.84■□□□□ 0.45
COMMD4-225ENST00000569245 HDLBPQ00341 1268 aaKnown RBP17.84■□□□□ 0.45
COMMD4-225ENST00000569245 POLA2Q14181 598 aa17.84■□□□□ 0.45
COMMD4-225ENST00000569245 CHMP4BQ9H444 224 aaKnown RBP17.84■□□□□ 0.45
COMMD4-225ENST00000569245 PPP2R3BQ9Y5P8 575 aa17.84■□□□□ 0.45
COMMD4-225ENST00000569245 TNFAIP1Q13829 316 aa17.83■□□□□ 0.44
COMMD4-225ENST00000569245 RASA3Q14644 834 aa17.83■□□□□ 0.44
COMMD4-225ENST00000569245 SUPT20HL1Q3ZLR7 823 aa17.83■□□□□ 0.44
COMMD4-225ENST00000569245 SPDYE2Q495Y8 402 aa17.83■□□□□ 0.44
COMMD4-225ENST00000569245 COL13A1Q5TAT6 717 aaPredicted RBP17.83■□□□□ 0.44
COMMD4-225ENST00000569245 ARMC9Q7Z3E5 817 aa17.83■□□□□ 0.44
COMMD4-225ENST00000569245 SSH3Q8TE77 659 aa17.83■□□□□ 0.44
COMMD4-225ENST00000569245 TCP10L2B9ZVM9 353 aa17.82■□□□□ 0.44
COMMD4-225ENST00000569245 LDHBP07195 334 aaKnown RBP17.82■□□□□ 0.44
COMMD4-225ENST00000569245 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.82■□□□□ 0.44
COMMD4-225ENST00000569245 FAM155AB1AL88 458 aaPredicted RBP17.81■□□□□ 0.44
COMMD4-225ENST00000569245 PPP1R12BO60237 982 aaPredicted RBP17.81■□□□□ 0.44
COMMD4-225ENST00000569245 TNNI2P48788 182 aa17.81■□□□□ 0.44
COMMD4-225ENST00000569245 ZDHHC15Q96MV8 337 aa17.81■□□□□ 0.44
COMMD4-225ENST00000569245 ZIC5Q96T25 663 aa17.81■□□□□ 0.44
COMMD4-225ENST00000569245 MRIQ9BWK5 157 aa17.81■□□□□ 0.44
COMMD4-225ENST00000569245 PPP4R2Q9NY27 417 aa17.81■□□□□ 0.44
COMMD4-225ENST00000569245 TMOD2Q9NZR1 351 aa17.81■□□□□ 0.44
COMMD4-225ENST00000569245 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.81■□□□□ 0.44
COMMD4-225ENST00000569245 ANGEL1Q9UNK9 670 aaKnown RBP17.81■□□□□ 0.44
COMMD4-225ENST00000569245 COL1A1P02452 1464 aaPredicted RBP17.81■□□□□ 0.44
COMMD4-225ENST00000569245 SLC10A3P09131 477 aa17.8■□□□□ 0.44
COMMD4-225ENST00000569245 LBX1P52954 281 aa17.8■□□□□ 0.44
COMMD4-225ENST00000569245 KIF23Q02241 960 aaPredicted RBP17.8■□□□□ 0.44
COMMD4-225ENST00000569245 RASGRF1Q13972 1273 aa17.8■□□□□ 0.44
COMMD4-225ENST00000569245 NBPF12Q5TAG4 269 aaPredicted RBP17.8■□□□□ 0.44
COMMD4-225ENST00000569245 CEP85Q6P2H3 762 aa17.8■□□□□ 0.44
COMMD4-225ENST00000569245 HHIPL2Q6UWX4 724 aa17.8■□□□□ 0.44
COMMD4-225ENST00000569245 ZGPATQ8N5A5 531 aaKnown RBP17.8■□□□□ 0.44
COMMD4-225ENST00000569245 PRDX5P30044 214 aa17.79■□□□□ 0.44
COMMD4-225ENST00000569245 CACNB3P54284 484 aa17.79■□□□□ 0.44
COMMD4-225ENST00000569245 DIXDC1Q155Q3 683 aa17.79■□□□□ 0.44
COMMD4-225ENST00000569245 RASAL3Q86YV0 1011 aa17.79■□□□□ 0.44
COMMD4-225ENST00000569245 ZBTB40Q9NUA8 1239 aa17.79■□□□□ 0.44
COMMD4-225ENST00000569245 ABCF2Q9UG63 623 aa17.79■□□□□ 0.44
COMMD4-225ENST00000569245 FZD1Q9UP38 647 aa17.79■□□□□ 0.44
COMMD4-225ENST00000569245 SALL1Q9NSC2 1324 aa17.78■□□□□ 0.44
COMMD4-225ENST00000569245 HSPA8P11142 646 aaKnown RBP17.78■□□□□ 0.44
COMMD4-225ENST00000569245 SPTY2D1Q68D10 685 aaPredicted RBP17.78■□□□□ 0.44
COMMD4-225ENST00000569245 APOBEC3HQ6NTF7 200 aaKnown RBP17.78■□□□□ 0.44
COMMD4-225ENST00000569245 DZIP1Q86YF9 867 aaKnown RBP17.78■□□□□ 0.44
COMMD4-225ENST00000569245 TSKSQ9UJT2 592 aa17.78■□□□□ 0.44
COMMD4-225ENST00000569245 NOP58Q9Y2X3 529 aaKnown RBP17.78■□□□□ 0.44
COMMD4-225ENST00000569245 PAPPA2Q9BXP8 1791 aa17.78■□□□□ 0.44
COMMD4-225ENST00000569245 CA12O43570 354 aa17.77■□□□□ 0.44
COMMD4-225ENST00000569245 MKRN3Q13064 507 aaKnown RBP17.77■□□□□ 0.44
COMMD4-225ENST00000569245 TNNI3KQ59H18 835 aa17.77■□□□□ 0.44
COMMD4-225ENST00000569245 TNS4Q8IZW8 715 aa17.77■□□□□ 0.44
COMMD4-225ENST00000569245 TMEM39BQ9GZU3 492 aa17.77■□□□□ 0.44
COMMD4-225ENST00000569245 PRDM10Q9NQV6 1147 aa17.77■□□□□ 0.44
COMMD4-225ENST00000569245 FPGT-TNNI3KV9GXZ4 949 aa17.77■□□□□ 0.44
COMMD4-225ENST00000569245 UQCRFS1P1P0C7P4 283 aa17.76■□□□□ 0.43
COMMD4-225ENST00000569245 IREB2P48200 963 aaKnown RBP17.76■□□□□ 0.43
COMMD4-225ENST00000569245 CCDC158Q5M9N0 1113 aa17.76■□□□□ 0.43
COMMD4-225ENST00000569245 TTC39AQ5SRH9 613 aa17.76■□□□□ 0.43
COMMD4-225ENST00000569245 SPATA5Q8NB90 893 aa17.76■□□□□ 0.43
COMMD4-225ENST00000569245 SLC10A4Q96EP9 437 aa17.76■□□□□ 0.43
COMMD4-225ENST00000569245 GPR108Q9NPR9 543 aa17.76■□□□□ 0.43
COMMD4-225ENST00000569245 HMG20BQ9P0W2 317 aa17.76■□□□□ 0.43
COMMD4-225ENST00000569245 DAGLAQ9Y4D2 1042 aa17.76■□□□□ 0.43
COMMD4-225ENST00000569245 PDS5AQ29RF7 1337 aaKnown RBP17.75■□□□□ 0.43
COMMD4-225ENST00000569245 ZBTB22O15209 634 aa17.75■□□□□ 0.43
COMMD4-225ENST00000569245 HMMRO75330 724 aa17.75■□□□□ 0.43
COMMD4-225ENST00000569245 LDLRAD1Q5T700 205 aa17.75■□□□□ 0.43
COMMD4-225ENST00000569245 ERICH6Q7L0X2 663 aa17.75■□□□□ 0.43
COMMD4-225ENST00000569245 SLF2Q8IX21 1173 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms