RNA–Protein interactions for RNA: ENST00000569243.5

UBR1-209, Transcript of ubiquitin protein ligase E3 component n-recognin 1, human

TSL 3

Gene UBR1, Length 702 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBR1-209	ENST00000569243	RAB6A	P20340	208 aa		7.35	□□□□□ -1.23
UBR1-209	ENST00000569243	FKBP5	Q13451	457 aa	Predicted RBP	7.35	□□□□□ -1.23
UBR1-209	ENST00000569243	FAM26D	Q5JW98	314 aa		7.35	□□□□□ -1.23
UBR1-209	ENST00000569243	EXOSC6	Q5RKV6	272 aa	Known RBP	7.35	□□□□□ -1.23
UBR1-209	ENST00000569243	PI4K2B	Q8TCG2	481 aa		7.35	□□□□□ -1.23
UBR1-209	ENST00000569243	FNDC3A	Q9Y2H6	1198 aa	Known RBP	7.35	□□□□□ -1.23
UBR1-209	ENST00000569243	TRPA1	O75762	1119 aa		7.34	□□□□□ -1.23
UBR1-209	ENST00000569243	MAP7	Q14244	749 aa		7.34	□□□□□ -1.23
UBR1-209	ENST00000569243	ZMIZ1	Q9ULJ6	1067 aa		7.34	□□□□□ -1.23
UBR1-209	ENST00000569243	SOX13	Q9UN79	622 aa		7.34	□□□□□ -1.23
UBR1-209	ENST00000569243	TNFRSF11A	Q9Y6Q6	616 aa	Predicted RBP	7.34	□□□□□ -1.23
UBR1-209	ENST00000569243	NFKBIE	O00221	500 aa		7.33	□□□□□ -1.24
UBR1-209	ENST00000569243	PDE2A	O00408	941 aa	Predicted RBP	7.33	□□□□□ -1.24
UBR1-209	ENST00000569243	TSPAN15	O95858	294 aa		7.33	□□□□□ -1.24
UBR1-209	ENST00000569243	BRD2	P25440	801 aa	Known RBP	7.33	□□□□□ -1.24
UBR1-209	ENST00000569243	CD96	P40200	585 aa		7.33	□□□□□ -1.24
UBR1-209	ENST00000569243	CDCA8	Q53HL2	280 aa		7.33	□□□□□ -1.24
UBR1-209	ENST00000569243	ANKLE2	Q86XL3	938 aa		7.33	□□□□□ -1.24
UBR1-209	ENST00000569243	MISP3	Q96FF7	219 aa		7.33	□□□□□ -1.24
UBR1-209	ENST00000569243	HHIP	Q96QV1	700 aa		7.33	□□□□□ -1.24
UBR1-209	ENST00000569243	FAM13B	Q9NYF5	915 aa		7.33	□□□□□ -1.24
UBR1-209	ENST00000569243	IKBKE	Q14164	716 aa		7.32	□□□□□ -1.24
UBR1-209	ENST00000569243	C16orf46	Q6P387	395 aa		7.32	□□□□□ -1.24
UBR1-209	ENST00000569243	SAP130	Q9H0E3	1048 aa		7.32	□□□□□ -1.24
UBR1-209	ENST00000569243	FAM53C	Q9NYF3	392 aa		7.32	□□□□□ -1.24
UBR1-209	ENST00000569243	RAPGEFL1	Q9UHV5	662 aa		7.32	□□□□□ -1.24
UBR1-209	ENST00000569243	ACTL7B	Q9Y614	415 aa		7.32	□□□□□ -1.24
UBR1-209	ENST00000569243	ZNF503-AS2	A6NEH8	195 aa		7.31	□□□□□ -1.24
UBR1-209	ENST00000569243	GPR152	Q8TDT2	470 aa		7.31	□□□□□ -1.24
UBR1-209	ENST00000569243	PRIMPOL	Q96LW4	560 aa		7.31	□□□□□ -1.24
UBR1-209	ENST00000569243	PPP1R16B	Q96T49	567 aa		7.31	□□□□□ -1.24
UBR1-209	ENST00000569243	SEMA6C	Q9H3T2	930 aa		7.31	□□□□□ -1.24
UBR1-209	ENST00000569243	DZANK1	Q9NVP4	752 aa		7.31	□□□□□ -1.24
UBR1-209	ENST00000569243	CXXC1	Q9P0U4	656 aa	Predicted RBP	7.31	□□□□□ -1.24
UBR1-209	ENST00000569243	ADH5	P11766	374 aa		7.3	□□□□□ -1.24
UBR1-209	ENST00000569243	ZSWIM9	Q86XI8	627 aa		7.3	□□□□□ -1.24
UBR1-209	ENST00000569243	PLD6	Q8N2A8	252 aa	Known RBP	7.3	□□□□□ -1.24
UBR1-209	ENST00000569243	CLP1	Q92989	425 aa	Known RBP	7.3	□□□□□ -1.24
UBR1-209	ENST00000569243	SERPINA10	Q9UK55	444 aa		7.3	□□□□□ -1.24
UBR1-209	ENST00000569243	PRMT3	O60678	531 aa		7.29	□□□□□ -1.24
UBR1-209	ENST00000569243	INHBB	P09529	407 aa		7.29	□□□□□ -1.24
UBR1-209	ENST00000569243	OGFOD3	Q6PK18	319 aa		7.29	□□□□□ -1.24
UBR1-209	ENST00000569243	SYDE1	Q6ZW31	735 aa	Predicted RBP	7.29	□□□□□ -1.24
UBR1-209	ENST00000569243	STK32A	Q8WU08	396 aa		7.29	□□□□□ -1.24
UBR1-209	ENST00000569243	PBXIP1	Q96AQ6	731 aa		7.29	□□□□□ -1.24
UBR1-209	ENST00000569243	TMEM63C	Q9P1W3	806 aa		7.29	□□□□□ -1.24
UBR1-209	ENST00000569243	CNTN3	Q9P232	1028 aa		7.29	□□□□□ -1.24
UBR1-209	ENST00000569243	SALL4	Q9UJQ4	1053 aa		7.29	□□□□□ -1.24
UBR1-209	ENST00000569243	CTSW	P56202	376 aa		7.28	□□□□□ -1.24
UBR1-209	ENST00000569243	KCNMB1	Q16558	191 aa		7.28	□□□□□ -1.24
UBR1-209	ENST00000569243	VN1R5	Q7Z5H4	357 aa		7.28	□□□□□ -1.24
UBR1-209	ENST00000569243	NETO1	Q8TDF5	533 aa		7.28	□□□□□ -1.24
UBR1-209	ENST00000569243	LIN37	Q96GY3	246 aa	Predicted RBP	7.28	□□□□□ -1.24
UBR1-209	ENST00000569243	LGR6	Q9HBX8	967 aa		7.28	□□□□□ -1.24
UBR1-209	ENST00000569243	C1GALT1	Q9NS00	363 aa		7.28	□□□□□ -1.24
UBR1-209	ENST00000569243	TRBV21OR9-2	A0A075B6F4	123 aa	Predicted RBP	7.27	□□□□□ -1.25
UBR1-209	ENST00000569243	DYNC1LI2	O43237	492 aa	Predicted RBP	7.27	□□□□□ -1.25
UBR1-209	ENST00000569243	ZAP70	P43403	619 aa		7.27	□□□□□ -1.25
UBR1-209	ENST00000569243	DYM	Q7RTS9	669 aa		7.27	□□□□□ -1.25
UBR1-209	ENST00000569243	FAM181A	Q8N9Y4	354 aa		7.27	□□□□□ -1.25
UBR1-209	ENST00000569243	ELP3	Q9H9T3	547 aa		7.27	□□□□□ -1.25
UBR1-209	ENST00000569243	CRIM1	Q9NZV1	1036 aa		7.27	□□□□□ -1.25
UBR1-209	ENST00000569243	TNFRSF10B	O14763	440 aa		7.26	□□□□□ -1.25
UBR1-209	ENST00000569243	TMEM164	Q5U3C3	297 aa		7.26	□□□□□ -1.25
UBR1-209	ENST00000569243	BSND	Q8WZ55	320 aa		7.26	□□□□□ -1.25
UBR1-209	ENST00000569243	CCDC97	Q96F63	343 aa	Predicted RBP	7.26	□□□□□ -1.25
UBR1-209	ENST00000569243	ACSS3	Q9H6R3	686 aa		7.26	□□□□□ -1.25
UBR1-209	ENST00000569243	FAM105A	Q9NUU6	356 aa		7.26	□□□□□ -1.25
UBR1-209	ENST00000569243	STIM2	Q9P246	746 aa		7.26	□□□□□ -1.25
UBR1-209	ENST00000569243	VAV3	Q9UKW4	847 aa		7.26	□□□□□ -1.25
UBR1-209	ENST00000569243	C1QTNF9	P0C862	333 aa		7.25	□□□□□ -1.25
UBR1-209	ENST00000569243	GSTM4	Q03013	218 aa		7.25	□□□□□ -1.25
UBR1-209	ENST00000569243	CYP27C1	Q4G0S4	372 aa		7.25	□□□□□ -1.25
UBR1-209	ENST00000569243	SEZ6L2	Q6UXD5	910 aa		7.25	□□□□□ -1.25
UBR1-209	ENST00000569243	ABTB2	Q8N961	1025 aa		7.25	□□□□□ -1.25
UBR1-209	ENST00000569243	FLAD1	Q8NFF5	587 aa		7.25	□□□□□ -1.25
UBR1-209	ENST00000569243	KIR2DP1	A0A0G2JNF4	349 aa	Predicted RBP	7.24	□□□□□ -1.25
UBR1-209	ENST00000569243	CES1	P23141	567 aa		7.24	□□□□□ -1.25
UBR1-209	ENST00000569243	PRKCQ	Q04759	706 aa		7.24	□□□□□ -1.25
UBR1-209	ENST00000569243	TMEM102	Q8N9M5	508 aa	Predicted RBP	7.24	□□□□□ -1.25
UBR1-209	ENST00000569243	SOX17	Q9H6I2	414 aa	Predicted RBP	7.24	□□□□□ -1.25
UBR1-209	ENST00000569243	DAGLA	Q9Y4D2	1042 aa		7.24	□□□□□ -1.25
UBR1-209	ENST00000569243	IQCJ-SCHIP1	C9J366	451 aa	Predicted RBP	7.23	□□□□□ -1.25
UBR1-209	ENST00000569243	RPLP1	P05386	114 aa	Known RBP	7.23	□□□□□ -1.25
UBR1-209	ENST00000569243	AOC3	Q16853	763 aa		7.23	□□□□□ -1.25
UBR1-209	ENST00000569243	AKAP4	Q5JQC9	854 aa		7.23	□□□□□ -1.25
UBR1-209	ENST00000569243	ZNF438	Q7Z4V0	828 aa		7.23	□□□□□ -1.25
UBR1-209	ENST00000569243	C1orf127	Q8N9H9	656 aa		7.23	□□□□□ -1.25
UBR1-209	ENST00000569243	NXPE3	Q969Y0	559 aa		7.23	□□□□□ -1.25
UBR1-209	ENST00000569243	PRDM7	Q9NQW5	492 aa		7.23	□□□□□ -1.25
UBR1-209	ENST00000569243	ASPA	P45381	313 aa		7.22	□□□□□ -1.25
UBR1-209	ENST00000569243	PDE12	Q6L8Q7	609 aa	Known RBP	7.22	□□□□□ -1.25
UBR1-209	ENST00000569243	PRR23B	Q6ZRT6	265 aa		7.22	□□□□□ -1.25
UBR1-209	ENST00000569243	AMIGO3	Q86WK7	504 aa		7.22	□□□□□ -1.25
UBR1-209	ENST00000569243	CSRNP1	Q96S65	589 aa		7.22	□□□□□ -1.25
UBR1-209	ENST00000569243	NFIB	O00712	420 aa		7.21	□□□□□ -1.26
UBR1-209	ENST00000569243	KRT1	P04264	644 aa		7.21	□□□□□ -1.26
UBR1-209	ENST00000569243	ESRRA	P11474	423 aa	Predicted RBP	7.21	□□□□□ -1.26
UBR1-209	ENST00000569243	SLC23A3	Q6PIS1	610 aa		7.21	□□□□□ -1.26
UBR1-209	ENST00000569243	OSMR	Q99650	979 aa		7.21	□□□□□ -1.26

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