RNA–Protein interactions for RNA: ENST00000569080.1

CDH3-209, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 291 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-209ENST00000569080 ZKSCAN2Q63HK3 967 aa9.75□□□□□ -0.85
CDH3-209ENST00000569080 CDAN1Q8IWY9 1227 aa9.75□□□□□ -0.85
CDH3-209ENST00000569080 DZIP1LQ8IYY4 767 aaKnown RBP9.75□□□□□ -0.85
CDH3-209ENST00000569080 TBC1D22AQ8WUA7 517 aa9.75□□□□□ -0.85
CDH3-209ENST00000569080 TEPSINQ96N21 525 aa9.75□□□□□ -0.85
CDH3-209ENST00000569080 FZD1Q9UP38 647 aa9.75□□□□□ -0.85
CDH3-209ENST00000569080 HDAC5Q9UQL6 1122 aa9.75□□□□□ -0.85
CDH3-209ENST00000569080 CASP8AP2Q9UKL3 1982 aa9.74□□□□□ -0.85
CDH3-209ENST00000569080 PNMA6EA0A0J9YXQ4 647 aa9.74□□□□□ -0.85
CDH3-209ENST00000569080 MYO1BO43795 1136 aa9.74□□□□□ -0.85
CDH3-209ENST00000569080 PHKA1P46020 1223 aa9.74□□□□□ -0.85
CDH3-209ENST00000569080 ZDHHC15Q96MV8 337 aa9.74□□□□□ -0.85
CDH3-209ENST00000569080 CSRNP1Q96S65 589 aa9.74□□□□□ -0.85
CDH3-209ENST00000569080 BEGAINQ9BUH8 593 aa9.74□□□□□ -0.85
CDH3-209ENST00000569080 TDRD3Q9H7E2 651 aaKnown RBP9.74□□□□□ -0.85
CDH3-209ENST00000569080 VEZTQ9HBM0 779 aa9.74□□□□□ -0.85
CDH3-209ENST00000569080 SAGE1Q9NXZ1 904 aa9.74□□□□□ -0.85
CDH3-209ENST00000569080 CEP126Q9P2H0 1117 aa9.74□□□□□ -0.85
CDH3-209ENST00000569080 ZNF70Q9UC06 446 aaPredicted RBP9.74□□□□□ -0.85
CDH3-209ENST00000569080 SUGT1Q9Y2Z0 365 aa9.74□□□□□ -0.85
CDH3-209ENST00000569080 SALL1Q9NSC2 1324 aa9.74□□□□□ -0.85
CDH3-209ENST00000569080 RFX7Q2KHR2 1363 aa9.74□□□□□ -0.85
CDH3-209ENST00000569080 GNAI2P04899 355 aa9.73□□□□□ -0.85
CDH3-209ENST00000569080 PRDX5P30044 214 aa9.73□□□□□ -0.85
CDH3-209ENST00000569080 NF2P35240 595 aa9.73□□□□□ -0.85
CDH3-209ENST00000569080 RBM5P52756 815 aaKnown RBP eCLIP9.73□□□□□ -0.85
CDH3-209ENST00000569080 POLA2Q14181 598 aa9.73□□□□□ -0.85
CDH3-209ENST00000569080 RASA3Q14644 834 aa9.73□□□□□ -0.85
CDH3-209ENST00000569080 NBPF12Q5TAG4 269 aaPredicted RBP9.73□□□□□ -0.85
CDH3-209ENST00000569080 APOBEC3HQ6NTF7 200 aaKnown RBP9.73□□□□□ -0.85
CDH3-209ENST00000569080 ANGEL1Q9UNK9 670 aaKnown RBP9.73□□□□□ -0.85
CDH3-209ENST00000569080 PDS5AQ29RF7 1337 aaKnown RBP9.73□□□□□ -0.85
CDH3-209ENST00000569080 RPAP1Q9BWH6 1393 aaPredicted RBP9.73□□□□□ -0.85
CDH3-209ENST00000569080 MAST2Q6P0Q8 1798 aa9.73□□□□□ -0.85
CDH3-209ENST00000569080 A0A1B0GUL7 405 aa9.72□□□□□ -0.85
CDH3-209ENST00000569080 SEMA3EO15041 775 aa9.72□□□□□ -0.85
CDH3-209ENST00000569080 FRAT2O75474 233 aaPredicted RBP9.72□□□□□ -0.85
CDH3-209ENST00000569080 TFCP2Q12800 502 aa9.72□□□□□ -0.85
CDH3-209ENST00000569080 TNFAIP1Q13829 316 aa9.72□□□□□ -0.85
CDH3-209ENST00000569080 RASGRF1Q13972 1273 aa9.72□□□□□ -0.85
CDH3-209ENST00000569080 PRKG1Q13976 671 aa9.72□□□□□ -0.85
CDH3-209ENST00000569080 TTLL12Q14166 644 aaPredicted RBP9.72□□□□□ -0.85
CDH3-209ENST00000569080 CCDC102BQ68D86 513 aa9.72□□□□□ -0.85
CDH3-209ENST00000569080 ARMC9Q7Z3E5 817 aa9.72□□□□□ -0.85
CDH3-209ENST00000569080 WDR66Q8TBY9 1149 aa9.72□□□□□ -0.85
CDH3-209ENST00000569080 TEKT1Q969V4 418 aa9.72□□□□□ -0.85
CDH3-209ENST00000569080 CLMNQ96JQ2 1002 aa9.72□□□□□ -0.85
CDH3-209ENST00000569080 MRIQ9BWK5 157 aa9.72□□□□□ -0.85
CDH3-209ENST00000569080 TMEM39BQ9GZU3 492 aa9.72□□□□□ -0.85
CDH3-209ENST00000569080 RNF186Q9NXI6 227 aa9.72□□□□□ -0.85
CDH3-209ENST00000569080 MAST3O60307 1309 aa9.72□□□□□ -0.85
CDH3-209ENST00000569080 MYH2Q9UKX2 1941 aa9.72□□□□□ -0.85
CDH3-209ENST00000569080 DOCK2Q92608 1830 aa9.71□□□□□ -0.85
CDH3-209ENST00000569080 CACNB3P54284 484 aa9.71□□□□□ -0.86
CDH3-209ENST00000569080 DIXDC1Q155Q3 683 aa9.71□□□□□ -0.86
CDH3-209ENST00000569080 SPRYD7Q5W111 196 aa9.71□□□□□ -0.86
CDH3-209ENST00000569080 HHIPL2Q6UWX4 724 aa9.71□□□□□ -0.86
CDH3-209ENST00000569080 SSH3Q8TE77 659 aa9.71□□□□□ -0.86
CDH3-209ENST00000569080 C1orf115Q9H7X2 142 aa9.71□□□□□ -0.86
CDH3-209ENST00000569080 DAGLAQ9Y4D2 1042 aa9.71□□□□□ -0.86
CDH3-209ENST00000569080 CENPFP49454 3210 aa9.7□□□□□ -0.86
CDH3-209ENST00000569080 UNCXA6NJT0 531 aa9.7□□□□□ -0.86
CDH3-209ENST00000569080 TCP10L2B9ZVM9 353 aa9.7□□□□□ -0.86
CDH3-209ENST00000569080 ZBTB7BO15156 539 aaPredicted RBP9.7□□□□□ -0.86
CDH3-209ENST00000569080 USP2O75604 605 aaPredicted RBP9.7□□□□□ -0.86
CDH3-209ENST00000569080 GJA5P36382 358 aa9.7□□□□□ -0.86
CDH3-209ENST00000569080 TM4SF4P48230 202 aa9.7□□□□□ -0.86
CDH3-209ENST00000569080 TIMM10P62072 90 aa9.7□□□□□ -0.86
CDH3-209ENST00000569080 SUPT20HL1Q3ZLR7 823 aa9.7□□□□□ -0.86
CDH3-209ENST00000569080 FKBP1CQ5VVH2 108 aa9.7□□□□□ -0.86
CDH3-209ENST00000569080 FAM83AQ86UY5 434 aa9.7□□□□□ -0.86
CDH3-209ENST00000569080 FTSJ3Q8IY81 847 aaKnown RBP9.7□□□□□ -0.86
CDH3-209ENST00000569080 REM2Q8IYK8 340 aaPredicted RBP9.7□□□□□ -0.86
CDH3-209ENST00000569080 XAGE2Q96GT9 111 aa9.7□□□□□ -0.86
CDH3-209ENST00000569080 WNK4Q96J92 1243 aa9.7□□□□□ -0.86
CDH3-209ENST00000569080 DENND2AQ9ULE3 1009 aa9.7□□□□□ -0.86
CDH3-209ENST00000569080 GAKO14976 1311 aa9.7□□□□□ -0.86
CDH3-209ENST00000569080 ATRNL1Q5VV63 1379 aa9.7□□□□□ -0.86
CDH3-209ENST00000569080 PPP1R12BO60237 982 aaPredicted RBP9.69□□□□□ -0.86
CDH3-209ENST00000569080 TRPA1O75762 1119 aa9.69□□□□□ -0.86
CDH3-209ENST00000569080 CAPN15O75808 1086 aa9.69□□□□□ -0.86
CDH3-209ENST00000569080 ZBTB48P10074 688 aaPredicted RBP9.69□□□□□ -0.86
CDH3-209ENST00000569080 MKRN3Q13064 507 aaKnown RBP9.69□□□□□ -0.86
CDH3-209ENST00000569080 PI16Q6UXB8 463 aa9.69□□□□□ -0.86
CDH3-209ENST00000569080 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.69□□□□□ -0.86
CDH3-209ENST00000569080 ITPRIPQ8IWB1 547 aa9.69□□□□□ -0.86
CDH3-209ENST00000569080 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.69□□□□□ -0.86
CDH3-209ENST00000569080 PANK1Q8TE04 598 aa9.69□□□□□ -0.86
CDH3-209ENST00000569080 ZNF384Q8TF68 577 aa9.69□□□□□ -0.86
CDH3-209ENST00000569080 ABHD8Q96I13 439 aa9.69□□□□□ -0.86
CDH3-209ENST00000569080 CFHR5Q9BXR6 569 aa9.69□□□□□ -0.86
CDH3-209ENST00000569080 GNL3LQ9NVN8 582 aaKnown RBP9.69□□□□□ -0.86
CDH3-209ENST00000569080 LDHBP07195 334 aaKnown RBP9.68□□□□□ -0.86
CDH3-209ENST00000569080 ARID4AP29374 1257 aaPredicted RBP9.68□□□□□ -0.86
CDH3-209ENST00000569080 IREB2P48200 963 aaKnown RBP9.68□□□□□ -0.86
CDH3-209ENST00000569080 ATP8B2P98198 1209 aa9.68□□□□□ -0.86
CDH3-209ENST00000569080 NFIAQ12857 509 aa9.68□□□□□ -0.86
CDH3-209ENST00000569080 VGLL4Q14135 290 aa9.68□□□□□ -0.86
CDH3-209ENST00000569080 MVPQ14764 893 aaKnown RBP9.68□□□□□ -0.86
CDH3-209ENST00000569080 CDC42EP5Q6NZY7 148 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms