RNA–Protein interactions for RNA: ENST00000569046.1

HMGB1P6-201, Transcript of high mobility group box 1 pseudogene 6, humanhuman

BASIC

Gene HMGB1P6, Length 646 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P6-201ENST00000569046 ATP2B2Q01814 1243 aa5.91□□□□□ -1.46
HMGB1P6-201ENST00000569046 TAGLNQ01995 201 aaKnown RBP5.91□□□□□ -1.46
HMGB1P6-201ENST00000569046 COL19A1Q14993 1142 aa5.91□□□□□ -1.46
HMGB1P6-201ENST00000569046 DTHD1Q6ZMT9 781 aa5.91□□□□□ -1.46
HMGB1P6-201ENST00000569046 DYRK3O43781 588 aa5.9□□□□□ -1.46
HMGB1P6-201ENST00000569046 ADAM23O75077 832 aa5.9□□□□□ -1.46
HMGB1P6-201ENST00000569046 EAPPQ56P03 285 aaPredicted RBP5.9□□□□□ -1.46
HMGB1P6-201ENST00000569046 RPS26P11Q5JNZ5 115 aaPredicted RBP5.9□□□□□ -1.46
HMGB1P6-201ENST00000569046 RUSC1Q9BVN2 902 aa5.9□□□□□ -1.46
HMGB1P6-201ENST00000569046 TMPRSS13Q9BYE2 586 aa5.9□□□□□ -1.46
HMGB1P6-201ENST00000569046 AKAP2Q9Y2D5 859 aa5.9□□□□□ -1.46
HMGB1P6-201ENST00000569046 K7ELQ4 463 aaPredicted RBP5.89□□□□□ -1.47
HMGB1P6-201ENST00000569046 PRPF40AO75400 957 aaKnown RBP5.89□□□□□ -1.47
HMGB1P6-201ENST00000569046 MAOBP27338 520 aa5.89□□□□□ -1.47
HMGB1P6-201ENST00000569046 FBXO33Q7Z6M2 555 aa5.89□□□□□ -1.47
HMGB1P6-201ENST00000569046 ARMC10Q8N2F6 343 aa5.89□□□□□ -1.47
HMGB1P6-201ENST00000569046 DUSP9Q99956 384 aaKnown RBP5.89□□□□□ -1.47
HMGB1P6-201ENST00000569046 RNF208Q9H0X6 261 aa5.89□□□□□ -1.47
HMGB1P6-201ENST00000569046 SEMA6BQ9H3T3 888 aa5.89□□□□□ -1.47
HMGB1P6-201ENST00000569046 C12orf49Q9H741 205 aa5.89□□□□□ -1.47
HMGB1P6-201ENST00000569046 PPP4R2Q9NY27 417 aa5.89□□□□□ -1.47
HMGB1P6-201ENST00000569046 ZBTB7CA1YPR0 619 aa5.88□□□□□ -1.47
HMGB1P6-201ENST00000569046 MEGF11A6BM72 1044 aa5.88□□□□□ -1.47
HMGB1P6-201ENST00000569046 XRCC5P13010 732 aaKnown RBP5.88□□□□□ -1.47
HMGB1P6-201ENST00000569046 PREPP48147 710 aa5.88□□□□□ -1.47
HMGB1P6-201ENST00000569046 POU4F3Q15319 338 aa5.88□□□□□ -1.47
HMGB1P6-201ENST00000569046 STK35Q8TDR2 534 aa5.88□□□□□ -1.47
HMGB1P6-201ENST00000569046 FAM46AQ96IP4 442 aaKnown RBP5.88□□□□□ -1.47
HMGB1P6-201ENST00000569046 SPG7Q9UQ90 795 aa5.88□□□□□ -1.47
HMGB1P6-201ENST00000569046 GIPC1O14908 333 aa5.87□□□□□ -1.47
HMGB1P6-201ENST00000569046 FBXO24O75426 580 aa5.87□□□□□ -1.47
HMGB1P6-201ENST00000569046 CYP11A1P05108 521 aa5.87□□□□□ -1.47
HMGB1P6-201ENST00000569046 H2AFB1P0C5Y9 115 aa5.87□□□□□ -1.47
HMGB1P6-201ENST00000569046 H2AFB2P0C5Z0 115 aa5.87□□□□□ -1.47
HMGB1P6-201ENST00000569046 USP17L7P0C7H9 530 aa5.87□□□□□ -1.47
HMGB1P6-201ENST00000569046 DRD2P14416 443 aa5.87□□□□□ -1.47
HMGB1P6-201ENST00000569046 GNA15P30679 374 aa5.87□□□□□ -1.47
HMGB1P6-201ENST00000569046 GSTT1P30711 240 aa5.87□□□□□ -1.47
HMGB1P6-201ENST00000569046 EXOSC6Q5RKV6 272 aaKnown RBP5.87□□□□□ -1.47
HMGB1P6-201ENST00000569046 TPTE2Q6XPS3 522 aa5.87□□□□□ -1.47
HMGB1P6-201ENST00000569046 FAM161BQ96MY7 647 aa5.87□□□□□ -1.47
HMGB1P6-201ENST00000569046 CEP41Q9BYV8 373 aa5.87□□□□□ -1.47
HMGB1P6-201ENST00000569046 SRCIN1Q9C0H9 1055 aa5.87□□□□□ -1.47
HMGB1P6-201ENST00000569046 PARP2Q9UGN5 583 aa5.87□□□□□ -1.47
HMGB1P6-201ENST00000569046 GPN3Q9UHW5 284 aaPredicted RBP5.87□□□□□ -1.47
HMGB1P6-201ENST00000569046 ENC1O14682 589 aa5.86□□□□□ -1.47
HMGB1P6-201ENST00000569046 TIAF1O95411 115 aa5.86□□□□□ -1.47
HMGB1P6-201ENST00000569046 TRIM26Q12899 539 aaPredicted RBP5.86□□□□□ -1.47
HMGB1P6-201ENST00000569046 NUTM2GQ5VZR2 741 aa5.86□□□□□ -1.47
HMGB1P6-201ENST00000569046 PRR23CQ6ZRP0 262 aa5.86□□□□□ -1.47
HMGB1P6-201ENST00000569046 PDZD3Q86UT5 571 aa5.86□□□□□ -1.47
HMGB1P6-201ENST00000569046 SMG8Q8ND04 991 aaKnown RBP5.86□□□□□ -1.47
HMGB1P6-201ENST00000569046 ZC3H12CQ9C0D7 883 aaKnown RBP5.86□□□□□ -1.47
HMGB1P6-201ENST00000569046 SUGCTQ9HAC7 445 aa5.86□□□□□ -1.47
HMGB1P6-201ENST00000569046 TMEM39AQ9NV64 488 aa5.86□□□□□ -1.47
HMGB1P6-201ENST00000569046 FAM8A1Q9UBU6 413 aa5.86□□□□□ -1.47
HMGB1P6-201ENST00000569046 PAGE1O75459 146 aa5.85□□□□□ -1.47
HMGB1P6-201ENST00000569046 AP3B2Q13367 1082 aa5.85□□□□□ -1.47
HMGB1P6-201ENST00000569046 TMCO4Q5TGY1 634 aa5.85□□□□□ -1.47
HMGB1P6-201ENST00000569046 ANKRD34AQ69YU3 496 aa5.85□□□□□ -1.47
HMGB1P6-201ENST00000569046 FDX2Q6P4F2 183 aa5.85□□□□□ -1.47
HMGB1P6-201ENST00000569046 C12orf50Q8NA57 414 aaPredicted RBP5.85□□□□□ -1.47
HMGB1P6-201ENST00000569046 UTP4Q969X6 686 aaKnown RBP5.85□□□□□ -1.47
HMGB1P6-201ENST00000569046 WDR89Q96FK6 387 aaPredicted RBP5.85□□□□□ -1.47
HMGB1P6-201ENST00000569046 NECAB3Q96P71 396 aaPredicted RBP5.85□□□□□ -1.47
HMGB1P6-201ENST00000569046 CORO1BQ9BR76 489 aa5.85□□□□□ -1.47
HMGB1P6-201ENST00000569046 CCDC86Q9H6F5 360 aaKnown RBP5.85□□□□□ -1.47
HMGB1P6-201ENST00000569046 AK5Q9Y6K8 562 aa5.85□□□□□ -1.47
HMGB1P6-201ENST00000569046 MYO15BQ96JP2 1530 aa5.84□□□□□ -1.47
HMGB1P6-201ENST00000569046 EIF4EBP3O60516 100 aaPredicted RBP5.84□□□□□ -1.47
HMGB1P6-201ENST00000569046 EIF4BP23588 611 aaKnown RBP5.84□□□□□ -1.47
HMGB1P6-201ENST00000569046 DAB2P98082 770 aa5.84□□□□□ -1.47
HMGB1P6-201ENST00000569046 PRSS36Q5K4E3 855 aa5.84□□□□□ -1.47
HMGB1P6-201ENST00000569046 RASIP1Q5U651 963 aa5.84□□□□□ -1.47
HMGB1P6-201ENST00000569046 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.84□□□□□ -1.47
HMGB1P6-201ENST00000569046 C2CD4AQ8NCU7 369 aaPredicted RBP5.84□□□□□ -1.47
HMGB1P6-201ENST00000569046 DDX54Q8TDD1 881 aaKnown RBP5.84□□□□□ -1.47
HMGB1P6-201ENST00000569046 MYRFLQ96LU7 910 aa5.84□□□□□ -1.47
HMGB1P6-201ENST00000569046 FRMD6Q96NE9 622 aa5.84□□□□□ -1.47
HMGB1P6-201ENST00000569046 WDR18Q9BV38 432 aa5.84□□□□□ -1.47
HMGB1P6-201ENST00000569046 ZFYVE1Q9HBF4 777 aa5.84□□□□□ -1.47
HMGB1P6-201ENST00000569046 CYP4F12Q9HCS2 524 aa5.84□□□□□ -1.47
HMGB1P6-201ENST00000569046 SART1O43290 800 aaKnown RBP5.83□□□□□ -1.48
HMGB1P6-201ENST00000569046 ZNF862O60290 1169 aa5.83□□□□□ -1.48
HMGB1P6-201ENST00000569046 AOC2O75106 756 aa5.83□□□□□ -1.48
HMGB1P6-201ENST00000569046 CELA3AP09093 270 aa5.83□□□□□ -1.48
HMGB1P6-201ENST00000569046 GSTP1P09211 210 aaKnown RBP5.83□□□□□ -1.48
HMGB1P6-201ENST00000569046 CTSHP09668 335 aa5.83□□□□□ -1.48
HMGB1P6-201ENST00000569046 ADH5P11766 374 aa5.83□□□□□ -1.48
HMGB1P6-201ENST00000569046 BMP3P12645 472 aa5.83□□□□□ -1.48
HMGB1P6-201ENST00000569046 LIG1P18858 919 aa5.83□□□□□ -1.48
HMGB1P6-201ENST00000569046 ERCC3P19447 782 aa5.83□□□□□ -1.48
HMGB1P6-201ENST00000569046 BMP6P22004 513 aa5.83□□□□□ -1.48
HMGB1P6-201ENST00000569046 PPP2R3AQ06190 1150 aa5.83□□□□□ -1.48
HMGB1P6-201ENST00000569046 SOX4Q06945 474 aaPredicted RBP5.83□□□□□ -1.48
HMGB1P6-201ENST00000569046 PDE3AQ14432 1141 aa5.83□□□□□ -1.48
HMGB1P6-201ENST00000569046 UVSSAQ2YD98 709 aa5.83□□□□□ -1.48
HMGB1P6-201ENST00000569046 SGO2Q562F6 1265 aa5.83□□□□□ -1.48
HMGB1P6-201ENST00000569046 AKAP4Q5JQC9 854 aa5.83□□□□□ -1.48
HMGB1P6-201ENST00000569046 MPRIPQ6WCQ1 1025 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms