RNA–Protein interactions for RNA: ENST00000568782.1

UBR1-207, Transcript of ubiquitin protein ligase E3 component n-recognin 1, human

TSL 3

Gene UBR1, Length 615 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBR1-207	ENST00000568782	SEMA3E	O15041	775 aa		12.82	□□□□□ -0.36
UBR1-207	ENST00000568782	FOXN1	O15353	648 aa		12.82	□□□□□ -0.36
UBR1-207	ENST00000568782	CRK	P46108	304 aa		12.82	□□□□□ -0.36
UBR1-207	ENST00000568782	PRAMEF18	Q5VWM3	479 aa		12.82	□□□□□ -0.36
UBR1-207	ENST00000568782	TNS4	Q8IZW8	715 aa		12.82	□□□□□ -0.36
UBR1-207	ENST00000568782	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	12.82	□□□□□ -0.36
UBR1-207	ENST00000568782	PRMT6	Q96LA8	375 aa	Predicted RBP	12.82	□□□□□ -0.36
UBR1-207	ENST00000568782	NEUROD6	Q96NK8	337 aa		12.82	□□□□□ -0.36
UBR1-207	ENST00000568782	PRDM10	Q9NQV6	1147 aa		12.82	□□□□□ -0.36
UBR1-207	ENST00000568782	SCAF8	Q9UPN6	1271 aa	Known RBP	12.82	□□□□□ -0.36
UBR1-207	ENST00000568782	MVP	Q14764	893 aa	Known RBP	12.81	□□□□□ -0.36
UBR1-207	ENST00000568782	ZBED3	Q96IU2	234 aa	Predicted RBP	12.81	□□□□□ -0.36
UBR1-207	ENST00000568782	LDHB	P07195	334 aa	Known RBP	12.8	□□□□□ -0.36
UBR1-207	ENST00000568782	LBX1	P52954	281 aa		12.8	□□□□□ -0.36
UBR1-207	ENST00000568782	PRKG1	Q13976	671 aa		12.8	□□□□□ -0.36
UBR1-207	ENST00000568782	COL13A1	Q5TAT6	717 aa	Predicted RBP	12.8	□□□□□ -0.36
UBR1-207	ENST00000568782	IFFO2	Q5TF58	517 aa		12.8	□□□□□ -0.36
UBR1-207	ENST00000568782	SLF2	Q8IX21	1173 aa		12.8	□□□□□ -0.36
UBR1-207	ENST00000568782	HOOK2	Q96ED9	719 aa		12.8	□□□□□ -0.36
UBR1-207	ENST00000568782	MRI	Q9BWK5	157 aa		12.8	□□□□□ -0.36
UBR1-207	ENST00000568782	TDRD3	Q9H7E2	651 aa	Known RBP	12.8	□□□□□ -0.36
UBR1-207	ENST00000568782	ANGEL1	Q9UNK9	670 aa	Known RBP	12.8	□□□□□ -0.36
UBR1-207	ENST00000568782	TNN	Q9UQP3	1299 aa		12.8	□□□□□ -0.36
UBR1-207	ENST00000568782		A0A1B0GUL7	405 aa		12.79	□□□□□ -0.36
UBR1-207	ENST00000568782	UBE2Q2L	H0YL09	131 aa		12.79	□□□□□ -0.36
UBR1-207	ENST00000568782	IREB2	P48200	963 aa	Known RBP	12.79	□□□□□ -0.36
UBR1-207	ENST00000568782	TIMM10	P62072	90 aa		12.79	□□□□□ -0.36
UBR1-207	ENST00000568782	TFCP2	Q12800	502 aa		12.79	□□□□□ -0.36
UBR1-207	ENST00000568782	SPTY2D1	Q68D10	685 aa	Predicted RBP	12.79	□□□□□ -0.36
UBR1-207	ENST00000568782	ZNF70	Q9UC06	446 aa	Predicted RBP	12.79	□□□□□ -0.36
UBR1-207	ENST00000568782	RCAN3	Q9UKA8	241 aa		12.79	□□□□□ -0.36
UBR1-207	ENST00000568782	THSD7B	Q9C0I4	1608 aa		12.78	□□□□□ -0.36
UBR1-207	ENST00000568782	UNCX	A6NJT0	531 aa		12.78	□□□□□ -0.36
UBR1-207	ENST00000568782	TCP10L2	B9ZVM9	353 aa		12.78	□□□□□ -0.36
UBR1-207	ENST00000568782	SURF6	O75683	361 aa	Known RBP	12.78	□□□□□ -0.36
UBR1-207	ENST00000568782	SLC10A3	P09131	477 aa		12.78	□□□□□ -0.36
UBR1-207	ENST00000568782	ATP8B2	P98198	1209 aa		12.78	□□□□□ -0.36
UBR1-207	ENST00000568782	KIF23	Q02241	960 aa	Predicted RBP	12.78	□□□□□ -0.36
UBR1-207	ENST00000568782	RASA3	Q14644	834 aa		12.78	□□□□□ -0.36
UBR1-207	ENST00000568782	SPDYE2	Q495Y8	402 aa		12.78	□□□□□ -0.36
UBR1-207	ENST00000568782	CCDC102B	Q68D86	513 aa		12.78	□□□□□ -0.36
UBR1-207	ENST00000568782	HHIPL2	Q6UWX4	724 aa		12.78	□□□□□ -0.36
UBR1-207	ENST00000568782	SLC10A4	Q96EP9	437 aa		12.78	□□□□□ -0.36
UBR1-207	ENST00000568782	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	12.78	□□□□□ -0.36
UBR1-207	ENST00000568782	PNMA6E	A0A0J9YXQ4	647 aa		12.77	□□□□□ -0.37
UBR1-207	ENST00000568782	ZBTB7B	O15156	539 aa	Predicted RBP	12.77	□□□□□ -0.37
UBR1-207	ENST00000568782	PHKA1	P46020	1223 aa		12.77	□□□□□ -0.37
UBR1-207	ENST00000568782	CCDC158	Q5M9N0	1113 aa		12.77	□□□□□ -0.37
UBR1-207	ENST00000568782	DZIP1	Q86YF9	867 aa	Known RBP	12.77	□□□□□ -0.37
UBR1-207	ENST00000568782	XAGE2	Q96GT9	111 aa		12.77	□□□□□ -0.37
UBR1-207	ENST00000568782	ZDHHC15	Q96MV8	337 aa		12.77	□□□□□ -0.37
UBR1-207	ENST00000568782	ABCF2	Q9UG63	623 aa		12.77	□□□□□ -0.37
UBR1-207	ENST00000568782	DDX19B	Q9UMR2	479 aa		12.77	□□□□□ -0.37
UBR1-207	ENST00000568782	PCDHAC2	Q9Y5I4	1007 aa		12.77	□□□□□ -0.37
UBR1-207	ENST00000568782	MYH2	Q9UKX2	1941 aa		12.77	□□□□□ -0.37
UBR1-207	ENST00000568782	FAM155A	B1AL88	458 aa	Predicted RBP	12.76	□□□□□ -0.37
UBR1-207	ENST00000568782	UQCRFS1P1	P0C7P4	283 aa		12.76	□□□□□ -0.37
UBR1-207	ENST00000568782	HSPA8	P11142	646 aa	Known RBP	12.76	□□□□□ -0.37
UBR1-207	ENST00000568782	SREBF2	Q12772	1141 aa		12.76	□□□□□ -0.37
UBR1-207	ENST00000568782	HSP90AB4P	Q58FF6	505 aa		12.76	□□□□□ -0.37
UBR1-207	ENST00000568782	MOB2	Q70IA6	237 aa		12.76	□□□□□ -0.37
UBR1-207	ENST00000568782	C1orf115	Q9H7X2	142 aa		12.76	□□□□□ -0.37
UBR1-207	ENST00000568782	HMMR	O75330	724 aa		12.75	□□□□□ -0.37
UBR1-207	ENST00000568782	RLBP1	P12271	317 aa		12.75	□□□□□ -0.37
UBR1-207	ENST00000568782	ADORA1	P30542	326 aa		12.75	□□□□□ -0.37
UBR1-207	ENST00000568782	NBPF12	Q5TAG4	269 aa	Predicted RBP	12.75	□□□□□ -0.37
UBR1-207	ENST00000568782	FKBP1C	Q5VVH2	108 aa		12.75	□□□□□ -0.37
UBR1-207	ENST00000568782	ERICH6	Q7L0X2	663 aa		12.75	□□□□□ -0.37
UBR1-207	ENST00000568782	RASAL3	Q86YV0	1011 aa		12.75	□□□□□ -0.37
UBR1-207	ENST00000568782	ERC1	Q8IUD2	1116 aa		12.75	□□□□□ -0.37
UBR1-207	ENST00000568782	ANKRD13A	Q8IZ07	590 aa		12.75	□□□□□ -0.37
UBR1-207	ENST00000568782	PANK1	Q8TE04	598 aa		12.75	□□□□□ -0.37
UBR1-207	ENST00000568782	SSH3	Q8TE77	659 aa		12.75	□□□□□ -0.37
UBR1-207	ENST00000568782	SALL1	Q9NSC2	1324 aa		12.75	□□□□□ -0.37
UBR1-207	ENST00000568782	SAGE1	Q9NXZ1	904 aa		12.75	□□□□□ -0.37
UBR1-207	ENST00000568782	CASP8AP2	Q9UKL3	1982 aa		12.74	□□□□□ -0.37
UBR1-207	ENST00000568782	PDS5A	Q29RF7	1337 aa	Known RBP	12.74	□□□□□ -0.37
UBR1-207	ENST00000568782	LDHC	P07864	332 aa		12.74	□□□□□ -0.37
UBR1-207	ENST00000568782	INHBE	P58166	350 aa		12.74	□□□□□ -0.37
UBR1-207	ENST00000568782	GSTO1	P78417	241 aa		12.74	□□□□□ -0.37
UBR1-207	ENST00000568782	POLA2	Q14181	598 aa		12.74	□□□□□ -0.37
UBR1-207	ENST00000568782	MAP3K11	Q16584	847 aa		12.74	□□□□□ -0.37
UBR1-207	ENST00000568782	TTC39A	Q5SRH9	613 aa		12.74	□□□□□ -0.37
UBR1-207	ENST00000568782	DCAF15	Q66K64	600 aa		12.74	□□□□□ -0.37
UBR1-207	ENST00000568782	FAM83A	Q86UY5	434 aa		12.74	□□□□□ -0.37
UBR1-207	ENST00000568782	CSRNP1	Q96S65	589 aa		12.74	□□□□□ -0.37
UBR1-207	ENST00000568782	NOL10	Q9BSC4	688 aa	Known RBP	12.74	□□□□□ -0.37
UBR1-207	ENST00000568782	GPR108	Q9NPR9	543 aa		12.74	□□□□□ -0.37
UBR1-207	ENST00000568782	CSAD	Q9Y600	493 aa		12.74	□□□□□ -0.37
UBR1-207	ENST00000568782	ZBTB22	O15209	634 aa		12.73	□□□□□ -0.37
UBR1-207	ENST00000568782	TRPA1	O75762	1119 aa		12.73	□□□□□ -0.37
UBR1-207	ENST00000568782	PRDX5	P30044	214 aa		12.73	□□□□□ -0.37
UBR1-207	ENST00000568782	MKRN3	Q13064	507 aa	Known RBP	12.73	□□□□□ -0.37
UBR1-207	ENST00000568782	RASGRF1	Q13972	1273 aa		12.73	□□□□□ -0.37
UBR1-207	ENST00000568782	GRIK5	Q16478	980 aa		12.73	□□□□□ -0.37
UBR1-207	ENST00000568782	LDLRAD1	Q5T700	205 aa		12.73	□□□□□ -0.37
UBR1-207	ENST00000568782	OTUD7B	Q6GQQ9	843 aa		12.73	□□□□□ -0.37
UBR1-207	ENST00000568782	RPAP2	Q8IXW5	612 aa	Predicted RBP	12.73	□□□□□ -0.37
UBR1-207	ENST00000568782	TMEM39B	Q9GZU3	492 aa		12.73	□□□□□ -0.37
UBR1-207	ENST00000568782	TSKS	Q9UJT2	592 aa		12.73	□□□□□ -0.37

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