RNA–Protein interactions for RNA: ENST00000568744.1

CYLD-213, Transcript of CYLD lysine 63 deubiquitinase, humanhuman

TSL 2

Gene CYLD, Length 370 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYLD-213ENST00000568744 GALNT11Q8NCW6 608 aa9.38□□□□□ -0.91
CYLD-213ENST00000568744 STK17AQ9UEE5 414 aa9.38□□□□□ -0.91
CYLD-213ENST00000568744 DDX3YO15523 660 aaKnown RBP9.37□□□□□ -0.91
CYLD-213ENST00000568744 DEAF1O75398 565 aaPredicted RBP9.37□□□□□ -0.91
CYLD-213ENST00000568744 SUZ12Q15022 739 aaKnown RBP9.37□□□□□ -0.91
CYLD-213ENST00000568744 TTBK2Q6IQ55 1244 aa9.37□□□□□ -0.91
CYLD-213ENST00000568744 NT5DC4Q86YG4 428 aa9.37□□□□□ -0.91
CYLD-213ENST00000568744 FMR1NBQ8N0W7 255 aaPredicted RBP9.37□□□□□ -0.91
CYLD-213ENST00000568744 DTWD1Q8N5C7 304 aa9.37□□□□□ -0.91
CYLD-213ENST00000568744 ANKRD24Q8TF21 1146 aa9.37□□□□□ -0.91
CYLD-213ENST00000568744 NOC4LQ9BVI4 516 aaKnown RBP9.37□□□□□ -0.91
CYLD-213ENST00000568744 ZC3H12CQ9C0D7 883 aaKnown RBP9.37□□□□□ -0.91
CYLD-213ENST00000568744 SRA1Q9HD15 236 aaKnown RBP9.37□□□□□ -0.91
CYLD-213ENST00000568744 NOP53Q9NZM5 478 aaKnown RBP9.37□□□□□ -0.91
CYLD-213ENST00000568744 MINDY4BA8MYZ0 360 aa9.36□□□□□ -0.91
CYLD-213ENST00000568744 NME2P22392 152 aa9.36□□□□□ -0.91
CYLD-213ENST00000568744 ERCC5P28715 1186 aaPredicted RBP9.36□□□□□ -0.91
CYLD-213ENST00000568744 GBP2P32456 591 aaPredicted RBP9.36□□□□□ -0.91
CYLD-213ENST00000568744 CD68P34810 354 aaPredicted RBP9.36□□□□□ -0.91
CYLD-213ENST00000568744 PCNX4Q63HM2 1172 aa9.36□□□□□ -0.91
CYLD-213ENST00000568744 FBXO11Q86XK2 927 aa9.36□□□□□ -0.91
CYLD-213ENST00000568744 SCARF2Q96GP6 870 aaPredicted RBP9.36□□□□□ -0.91
CYLD-213ENST00000568744 CORO1BQ9BR76 489 aa9.36□□□□□ -0.91
CYLD-213ENST00000568744 SOX17Q9H6I2 414 aaPredicted RBP9.36□□□□□ -0.91
CYLD-213ENST00000568744 COPRSQ9NQ92 184 aa9.36□□□□□ -0.91
CYLD-213ENST00000568744 CYP11A1P05108 521 aa9.35□□□□□ -0.91
CYLD-213ENST00000568744 ARNTP27540 789 aa9.35□□□□□ -0.91
CYLD-213ENST00000568744 LIG3P49916 1009 aa9.35□□□□□ -0.91
CYLD-213ENST00000568744 AP3B2Q13367 1082 aa9.35□□□□□ -0.91
CYLD-213ENST00000568744 POU4F3Q15319 338 aa9.35□□□□□ -0.91
CYLD-213ENST00000568744 ZNF394Q53GI3 561 aa9.35□□□□□ -0.91
CYLD-213ENST00000568744 USP48Q86UV5 1035 aa9.35□□□□□ -0.91
CYLD-213ENST00000568744 DCAF11Q8TEB1 546 aa9.35□□□□□ -0.91
CYLD-213ENST00000568744 KCNB2Q92953 911 aa9.35□□□□□ -0.91
CYLD-213ENST00000568744 KBTBD4Q9NVX7 518 aa9.35□□□□□ -0.91
CYLD-213ENST00000568744 PCDHGB7Q9Y5F8 929 aa9.35□□□□□ -0.91
CYLD-213ENST00000568744 FAM181BA6NEQ2 426 aa9.34□□□□□ -0.91
CYLD-213ENST00000568744 RLBP1P12271 317 aa9.34□□□□□ -0.91
CYLD-213ENST00000568744 MAOBP27338 520 aa9.34□□□□□ -0.91
CYLD-213ENST00000568744 PWP1Q13610 501 aa9.34□□□□□ -0.91
CYLD-213ENST00000568744 FOXD4L6Q3SYB3 417 aaPredicted RBP9.34□□□□□ -0.91
CYLD-213ENST00000568744 FOXD4L3Q6VB84 417 aaPredicted RBP9.34□□□□□ -0.91
CYLD-213ENST00000568744 METTL16Q86W50 562 aaKnown RBP9.34□□□□□ -0.91
CYLD-213ENST00000568744 STK35Q8TDR2 534 aa9.34□□□□□ -0.91
CYLD-213ENST00000568744 EMILIN2Q9BXX0 1053 aa9.34□□□□□ -0.91
CYLD-213ENST00000568744 KCNK4Q9NYG8 393 aa9.34□□□□□ -0.91
CYLD-213ENST00000568744 EIF4EBP3O60516 100 aaPredicted RBP9.33□□□□□ -0.92
CYLD-213ENST00000568744 PDE3AQ14432 1141 aa9.33□□□□□ -0.92
CYLD-213ENST00000568744 DUOXA2Q1HG44 320 aa9.33□□□□□ -0.92
CYLD-213ENST00000568744 ERMP1Q7Z2K6 904 aa9.33□□□□□ -0.92
CYLD-213ENST00000568744 UBASH3BQ8TF42 649 aa9.33□□□□□ -0.92
CYLD-213ENST00000568744 RSRP1Q9BUV0 290 aa9.33□□□□□ -0.92
CYLD-213ENST00000568744 IGSF5Q9NSI5 407 aa9.33□□□□□ -0.92
CYLD-213ENST00000568744 TLR6Q9Y2C9 796 aa9.33□□□□□ -0.92
CYLD-213ENST00000568744 BMP6P22004 513 aa9.32□□□□□ -0.92
CYLD-213ENST00000568744 LRRC14Q15048 493 aa9.32□□□□□ -0.92
CYLD-213ENST00000568744 GRIK4Q16099 956 aa9.32□□□□□ -0.92
CYLD-213ENST00000568744 MAP1SQ66K74 1059 aaPredicted RBP9.32□□□□□ -0.92
CYLD-213ENST00000568744 LLGL2Q6P1M3 1020 aa9.32□□□□□ -0.92
CYLD-213ENST00000568744 ILDR2Q71H61 639 aa9.32□□□□□ -0.92
CYLD-213ENST00000568744 GRIN3AQ8TCU5 1115 aa9.32□□□□□ -0.92
CYLD-213ENST00000568744 TMEM74Q96NL1 305 aa9.32□□□□□ -0.92
CYLD-213ENST00000568744 CCSER2Q9H7U1 834 aa9.32□□□□□ -0.92
CYLD-213ENST00000568744 ADAM11O75078 769 aa9.31□□□□□ -0.92
CYLD-213ENST00000568744 ECEL1O95672 775 aa9.31□□□□□ -0.92
CYLD-213ENST00000568744 GSTP1P09211 210 aaKnown RBP9.31□□□□□ -0.92
CYLD-213ENST00000568744 ELNP15502 786 aa9.31□□□□□ -0.92
CYLD-213ENST00000568744 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.31□□□□□ -0.92
CYLD-213ENST00000568744 DLL1O00548 723 aa9.3□□□□□ -0.92
CYLD-213ENST00000568744 FAM160A1Q05DH4 1040 aa9.3□□□□□ -0.92
CYLD-213ENST00000568744 RASIP1Q5U651 963 aa9.3□□□□□ -0.92
CYLD-213ENST00000568744 SHISA2Q6UWI4 295 aa9.3□□□□□ -0.92
CYLD-213ENST00000568744 ACAD11Q709F0 780 aa9.3□□□□□ -0.92
CYLD-213ENST00000568744 ZNF654Q8IZM8 581 aa9.3□□□□□ -0.92
CYLD-213ENST00000568744 PHC3Q8NDX5 983 aa9.3□□□□□ -0.92
CYLD-213ENST00000568744 JARID2Q92833 1246 aaPredicted RBP9.3□□□□□ -0.92
CYLD-213ENST00000568744 ACSBG1Q96GR2 724 aa9.3□□□□□ -0.92
CYLD-213ENST00000568744 USP21Q9UK80 565 aa9.3□□□□□ -0.92
CYLD-213ENST00000568744 PCDHB5Q9Y5E4 795 aa9.3□□□□□ -0.92
CYLD-213ENST00000568744 LOC100289279A0A1B0GTE1 492 aa9.29□□□□□ -0.92
CYLD-213ENST00000568744 APBA3O96018 575 aa9.29□□□□□ -0.92
CYLD-213ENST00000568744 SNAP47Q5SQN1 464 aa9.29□□□□□ -0.92
CYLD-213ENST00000568744 AGMOQ6ZNB7 445 aa9.29□□□□□ -0.92
CYLD-213ENST00000568744 MIR1-1HGQ9H1L0 117 aa9.29□□□□□ -0.92
CYLD-213ENST00000568744 CYP8B1Q9UNU6 501 aa9.29□□□□□ -0.92
CYLD-213ENST00000568744 WISP1O95388 367 aa9.28□□□□□ -0.92
CYLD-213ENST00000568744 PF4P02776 101 aa9.28□□□□□ -0.92
CYLD-213ENST00000568744 CTSBP07858 339 aa9.28□□□□□ -0.92
CYLD-213ENST00000568744 SPATA31C1P0DKV0 1188 aa9.28□□□□□ -0.92
CYLD-213ENST00000568744 LIG1P18858 919 aa9.28□□□□□ -0.92
CYLD-213ENST00000568744 TFE3P19532 575 aaPredicted RBP9.28□□□□□ -0.92
CYLD-213ENST00000568744 RPS26P62854 115 aaKnown RBP9.28□□□□□ -0.92
CYLD-213ENST00000568744 SEPT6Q14141 434 aa9.28□□□□□ -0.92
CYLD-213ENST00000568744 IGF2-ASQ6U949 168 aa9.28□□□□□ -0.92
CYLD-213ENST00000568744 MPRIPQ6WCQ1 1025 aa9.28□□□□□ -0.92
CYLD-213ENST00000568744 RUSC1Q9BVN2 902 aa9.28□□□□□ -0.92
CYLD-213ENST00000568744 TGIF2Q9GZN2 237 aa9.28□□□□□ -0.92
CYLD-213ENST00000568744 NRSN2Q9GZP1 204 aa9.28□□□□□ -0.92
CYLD-213ENST00000568744 CCDC86Q9H6F5 360 aaKnown RBP9.28□□□□□ -0.92
CYLD-213ENST00000568744 RAD18Q9NS91 495 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms