RNA–Protein interactions for RNA: ENST00000568477.5

CMTM3-215, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-215ENST00000568477 TNFAIP1Q13829 316 aa17.94■□□□□ 0.46
CMTM3-215ENST00000568477 GRIK5Q16478 980 aa17.94■□□□□ 0.46
CMTM3-215ENST00000568477 REM2Q8IYK8 340 aaPredicted RBP17.94■□□□□ 0.46
CMTM3-215ENST00000568477 DZIP1LQ8IYY4 767 aaKnown RBP17.94■□□□□ 0.46
CMTM3-215ENST00000568477 ZNF70Q9UC06 446 aaPredicted RBP17.94■□□□□ 0.46
CMTM3-215ENST00000568477 SUGT1Q9Y2Z0 365 aa17.94■□□□□ 0.46
CMTM3-215ENST00000568477 MAST3O60307 1309 aa17.94■□□□□ 0.46
CMTM3-215ENST00000568477 CAPN15O75808 1086 aa17.93■□□□□ 0.46
CMTM3-215ENST00000568477 RASA3Q14644 834 aa17.93■□□□□ 0.46
CMTM3-215ENST00000568477 SUPT20HL1Q3ZLR7 823 aa17.93■□□□□ 0.46
CMTM3-215ENST00000568477 WDR66Q8TBY9 1149 aa17.93■□□□□ 0.46
CMTM3-215ENST00000568477 TEKT1Q969V4 418 aa17.93■□□□□ 0.46
CMTM3-215ENST00000568477 TDRD3Q9H7E2 651 aaKnown RBP17.93■□□□□ 0.46
CMTM3-215ENST00000568477 GNL3LQ9NVN8 582 aaKnown RBP17.93■□□□□ 0.46
CMTM3-215ENST00000568477 SAGE1Q9NXZ1 904 aa17.93■□□□□ 0.46
CMTM3-215ENST00000568477 ANGEL1Q9UNK9 670 aaKnown RBP17.93■□□□□ 0.46
CMTM3-215ENST00000568477 PPP1R12BO60237 982 aaPredicted RBP17.92■□□□□ 0.46
CMTM3-215ENST00000568477 CENPBP07199 599 aaPredicted RBP17.92■□□□□ 0.46
CMTM3-215ENST00000568477 TMEM57Q8N5G2 664 aa17.92■□□□□ 0.46
CMTM3-215ENST00000568477 CSRNP1Q96S65 589 aa17.92■□□□□ 0.46
CMTM3-215ENST00000568477 SSC5DA1L4H1 1573 aa17.91■□□□□ 0.46
CMTM3-215ENST00000568477 LDLRAD1Q5T700 205 aa17.91■□□□□ 0.46
CMTM3-215ENST00000568477 NBPF12Q5TAG4 269 aaPredicted RBP17.91■□□□□ 0.46
CMTM3-215ENST00000568477 FTSJ3Q8IY81 847 aaKnown RBP17.91■□□□□ 0.46
CMTM3-215ENST00000568477 MRIQ9BWK5 157 aa17.9■□□□□ 0.46
CMTM3-215ENST00000568477 RNF186Q9NXI6 227 aa17.9■□□□□ 0.46
CMTM3-215ENST00000568477 FZD1Q9UP38 647 aa17.9■□□□□ 0.46
CMTM3-215ENST00000568477 MYH13Q9UKX3 1938 aa17.9■□□□□ 0.46
CMTM3-215ENST00000568477 TCP10L2B9ZVM9 353 aa17.89■□□□□ 0.45
CMTM3-215ENST00000568477 SEMA3EO15041 775 aa17.89■□□□□ 0.45
CMTM3-215ENST00000568477 TRPA1O75762 1119 aa17.89■□□□□ 0.45
CMTM3-215ENST00000568477 PHKA1P46020 1223 aa17.89■□□□□ 0.45
CMTM3-215ENST00000568477 TNNI2P48788 182 aa17.89■□□□□ 0.45
CMTM3-215ENST00000568477 MAP3K11Q16584 847 aa17.89■□□□□ 0.45
CMTM3-215ENST00000568477 ZDHHC15Q96MV8 337 aa17.89■□□□□ 0.45
CMTM3-215ENST00000568477 TMOD2Q9NZR1 351 aa17.89■□□□□ 0.45
CMTM3-215ENST00000568477 AKAP2Q9Y2D5 859 aa17.89■□□□□ 0.45
CMTM3-215ENST00000568477 AKAP11Q9UKA4 1901 aa17.88■□□□□ 0.45
CMTM3-215ENST00000568477 ADORA1P30542 326 aa17.88■□□□□ 0.45
CMTM3-215ENST00000568477 IREB2P48200 963 aaKnown RBP17.88■□□□□ 0.45
CMTM3-215ENST00000568477 TFCP2Q12800 502 aa17.88■□□□□ 0.45
CMTM3-215ENST00000568477 MKRN3Q13064 507 aaKnown RBP17.88■□□□□ 0.45
CMTM3-215ENST00000568477 HHIPL2Q6UWX4 724 aa17.88■□□□□ 0.45
CMTM3-215ENST00000568477 DENND2AQ9ULE3 1009 aa17.88■□□□□ 0.45
CMTM3-215ENST00000568477 PNMA6EA0A0J9YXQ4 647 aa17.87■□□□□ 0.45
CMTM3-215ENST00000568477 UNCXA6NJT0 531 aa17.87■□□□□ 0.45
CMTM3-215ENST00000568477 CCDC102BQ68D86 513 aa17.87■□□□□ 0.45
CMTM3-215ENST00000568477 ITPRIPQ8IWB1 547 aa17.87■□□□□ 0.45
CMTM3-215ENST00000568477 SLC10A4Q96EP9 437 aa17.87■□□□□ 0.45
CMTM3-215ENST00000568477 CASP8AP2Q9UKL3 1982 aa17.87■□□□□ 0.45
CMTM3-215ENST00000568477 A0A1B0GUL7 405 aa17.86■□□□□ 0.45
CMTM3-215ENST00000568477 ZBTB22O15209 634 aa17.86■□□□□ 0.45
CMTM3-215ENST00000568477 LDHBP07195 334 aaKnown RBP17.86■□□□□ 0.45
CMTM3-215ENST00000568477 TIMM10P62072 90 aa17.86■□□□□ 0.45
CMTM3-215ENST00000568477 SREBF2Q12772 1141 aa17.86■□□□□ 0.45
CMTM3-215ENST00000568477 G3BP1Q13283 466 aaKnown RBP eCLIP17.86■□□□□ 0.45
CMTM3-215ENST00000568477 MVPQ14764 893 aaKnown RBP17.86■□□□□ 0.45
CMTM3-215ENST00000568477 SPRYD7Q5W111 196 aa17.86■□□□□ 0.45
CMTM3-215ENST00000568477 APOBEC3HQ6NTF7 200 aaKnown RBP17.86■□□□□ 0.45
CMTM3-215ENST00000568477 CLMNQ96JQ2 1002 aa17.86■□□□□ 0.45
CMTM3-215ENST00000568477 TEPSINQ96N21 525 aa17.86■□□□□ 0.45
CMTM3-215ENST00000568477 TMEM39BQ9GZU3 492 aa17.86■□□□□ 0.45
CMTM3-215ENST00000568477 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.86■□□□□ 0.45
CMTM3-215ENST00000568477 SALL1Q9NSC2 1324 aa17.86■□□□□ 0.45
CMTM3-215ENST00000568477 USP2O75604 605 aaPredicted RBP17.85■□□□□ 0.45
CMTM3-215ENST00000568477 RLBP1P12271 317 aa17.85■□□□□ 0.45
CMTM3-215ENST00000568477 PRDX5P30044 214 aa17.85■□□□□ 0.45
CMTM3-215ENST00000568477 CACNB3P54284 484 aa17.85■□□□□ 0.45
CMTM3-215ENST00000568477 FKBP1CQ5VVH2 108 aa17.85■□□□□ 0.45
CMTM3-215ENST00000568477 XAGE2Q96GT9 111 aa17.85■□□□□ 0.45
CMTM3-215ENST00000568477 TM4SF4P48230 202 aa17.84■□□□□ 0.45
CMTM3-215ENST00000568477 RASGRF1Q13972 1273 aa17.84■□□□□ 0.45
CMTM3-215ENST00000568477 DIXDC1Q155Q3 683 aa17.84■□□□□ 0.45
CMTM3-215ENST00000568477 CDAN1Q8IWY9 1227 aa17.84■□□□□ 0.45
CMTM3-215ENST00000568477 ANKRD13AQ8IZ07 590 aa17.84■□□□□ 0.45
CMTM3-215ENST00000568477 ZGPATQ8N5A5 531 aaKnown RBP17.84■□□□□ 0.45
CMTM3-215ENST00000568477 ABHD8Q96I13 439 aa17.84■□□□□ 0.45
CMTM3-215ENST00000568477 WNK4Q96J92 1243 aa17.84■□□□□ 0.45
CMTM3-215ENST00000568477 NEUROD6Q96NK8 337 aa17.84■□□□□ 0.45
CMTM3-215ENST00000568477 DAGLAQ9Y4D2 1042 aa17.84■□□□□ 0.45
CMTM3-215ENST00000568477 PDS5AQ29RF7 1337 aaKnown RBP17.83■□□□□ 0.44
CMTM3-215ENST00000568477 ZBTB48P10074 688 aaPredicted RBP17.83■□□□□ 0.44
CMTM3-215ENST00000568477 POLA2Q14181 598 aa17.83■□□□□ 0.44
CMTM3-215ENST00000568477 GORABQ5T7V8 394 aa17.83■□□□□ 0.44
CMTM3-215ENST00000568477 FAM83AQ86UY5 434 aa17.83■□□□□ 0.44
CMTM3-215ENST00000568477 YTHDC1Q96MU7 727 aaKnown RBP17.83■□□□□ 0.44
CMTM3-215ENST00000568477 C1orf115Q9H7X2 142 aa17.83■□□□□ 0.44
CMTM3-215ENST00000568477 MANSC4A6NHS7 340 aaPredicted RBP17.82■□□□□ 0.44
CMTM3-215ENST00000568477 ZBTB7BO15156 539 aaPredicted RBP17.82■□□□□ 0.44
CMTM3-215ENST00000568477 ATP8B2P98198 1209 aa17.82■□□□□ 0.44
CMTM3-215ENST00000568477 OS9Q13438 667 aaPredicted RBP17.82■□□□□ 0.44
CMTM3-215ENST00000568477 SSH3Q8TE77 659 aa17.82■□□□□ 0.44
CMTM3-215ENST00000568477 HOOK2Q96ED9 719 aa17.82■□□□□ 0.44
CMTM3-215ENST00000568477 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.82■□□□□ 0.44
CMTM3-215ENST00000568477 DGKZQ13574 1117 aa17.81■□□□□ 0.44
CMTM3-215ENST00000568477 SPTY2D1Q68D10 685 aaPredicted RBP17.81■□□□□ 0.44
CMTM3-215ENST00000568477 MCOLN1Q9GZU1 580 aa17.81■□□□□ 0.44
CMTM3-215ENST00000568477 ABCF2Q9UG63 623 aa17.81■□□□□ 0.44
CMTM3-215ENST00000568477 RPAP1Q9BWH6 1393 aaPredicted RBP17.8■□□□□ 0.44
CMTM3-215ENST00000568477 MS4A1P11836 297 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 324.2 ms