RNA–Protein interactions for RNA: ENST00000568219.5

PALB2-206, Transcript of partner and localizer of BRCA2, humanhuman

TSL 1 (best) BASIC

Gene PALB2, Length 3,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-206ENST00000568219 PIP4K2BP78356 416 aa12.42□□□□□ -0.42
PALB2-206ENST00000568219 GRAMD1CQ8IYS0 662 aa12.42□□□□□ -0.42
PALB2-206ENST00000568219 OTUD6BQ8N6M0 293 aa12.42□□□□□ -0.42
PALB2-206ENST00000568219 LLPHQ9BRT6 129 aaKnown RBP12.42□□□□□ -0.42
PALB2-206ENST00000568219 PDIA3P30101 505 aaKnown RBP12.42□□□□□ -0.42
PALB2-206ENST00000568219 MRPS25P82663 173 aaKnown RBP12.42□□□□□ -0.42
PALB2-206ENST00000568219 MTF1Q14872 753 aa12.42□□□□□ -0.42
PALB2-206ENST00000568219 CCDC57Q2TAC2 916 aa12.42□□□□□ -0.42
PALB2-206ENST00000568219 TICAM2Q86XR7 235 aa12.42□□□□□ -0.42
PALB2-206ENST00000568219 CDC5LQ99459 802 aaKnown RBP12.42□□□□□ -0.42
PALB2-206ENST00000568219 LRRC7Q96NW7 1537 aa12.42□□□□□ -0.42
PALB2-206ENST00000568219 PNPLA6Q8IY17 1366 aa12.41□□□□□ -0.42
PALB2-206ENST00000568219 PFKFB2O60825 505 aa12.41□□□□□ -0.42
PALB2-206ENST00000568219 ALDH1L1O75891 902 aa12.41□□□□□ -0.42
PALB2-206ENST00000568219 YEATS4O95619 227 aa12.41□□□□□ -0.42
PALB2-206ENST00000568219 BRD3Q15059 726 aa12.41□□□□□ -0.42
PALB2-206ENST00000568219 ESCO1Q5FWF5 840 aa12.41□□□□□ -0.42
PALB2-206ENST00000568219 NUTM2AQ8IVF1 878 aaPredicted RBP12.41□□□□□ -0.42
PALB2-206ENST00000568219 LINC00301Q8NCQ3 95 aa12.41□□□□□ -0.42
PALB2-206ENST00000568219 OSBPL5Q9H0X9 879 aaPredicted RBP12.41□□□□□ -0.42
PALB2-206ENST00000568219 SLC12A7Q9Y666 1083 aa12.41□□□□□ -0.42
PALB2-206ENST00000568219 PHLPP2Q6ZVD8 1323 aa12.41□□□□□ -0.42
PALB2-206ENST00000568219 TMEM67Q5HYA8 995 aa12.41□□□□□ -0.42
PALB2-206ENST00000568219 ANKRD13DQ6ZTN6 518 aa12.41□□□□□ -0.42
PALB2-206ENST00000568219 FAM76AQ8TAV0 307 aa12.41□□□□□ -0.42
PALB2-206ENST00000568219 EFCC1Q9HA90 598 aa12.41□□□□□ -0.42
PALB2-206ENST00000568219 SAMM50Q9Y512 469 aa12.41□□□□□ -0.42
PALB2-206ENST00000568219 ZC3H6P61129 1189 aaKnown RBP12.41□□□□□ -0.42
PALB2-206ENST00000568219 TNNI3KQ59H18 835 aa12.41□□□□□ -0.42
PALB2-206ENST00000568219 CCDC91Q7Z6B0 441 aa12.41□□□□□ -0.42
PALB2-206ENST00000568219 SRLQ86TD4 932 aa12.41□□□□□ -0.42
PALB2-206ENST00000568219 NAPGQ99747 312 aaPredicted RBP12.41□□□□□ -0.42
PALB2-206ENST00000568219 ZBTB3Q9H5J0 574 aa12.41□□□□□ -0.42
PALB2-206ENST00000568219 FPGT-TNNI3KV9GXZ4 949 aa12.41□□□□□ -0.42
PALB2-206ENST00000568219 MACROD2A1Z1Q3 448 aa12.4□□□□□ -0.42
PALB2-206ENST00000568219 RRAGBQ5VZM2 374 aa12.4□□□□□ -0.42
PALB2-206ENST00000568219 SLC35F6Q8N357 371 aa12.4□□□□□ -0.42
PALB2-206ENST00000568219 MYCBPQ99417 103 aaPredicted RBP12.4□□□□□ -0.42
PALB2-206ENST00000568219 CROCC2H7BZ55 1655 aa12.4□□□□□ -0.42
PALB2-206ENST00000568219 CCDC151A5D8V7 595 aa12.4□□□□□ -0.42
PALB2-206ENST00000568219 NDUFAB1O14561 156 aa12.4□□□□□ -0.42
PALB2-206ENST00000568219 INPP5BP32019 993 aa12.4□□□□□ -0.42
PALB2-206ENST00000568219 SSRP1Q08945 709 aaKnown RBP12.4□□□□□ -0.42
PALB2-206ENST00000568219 POLA2Q14181 598 aa12.4□□□□□ -0.42
PALB2-206ENST00000568219 CYB5RLQ6IPT4 315 aa12.4□□□□□ -0.42
PALB2-206ENST00000568219 SRGAP1Q7Z6B7 1085 aa12.4□□□□□ -0.42
PALB2-206ENST00000568219 GOLGA6CA6NDK9 693 aa12.4□□□□□ -0.42
PALB2-206ENST00000568219 TBC1D8O95759 1140 aa12.4□□□□□ -0.42
PALB2-206ENST00000568219 GOLGA6DP0CG33 693 aa12.4□□□□□ -0.42
PALB2-206ENST00000568219 XBP1P17861 261 aa12.4□□□□□ -0.42
PALB2-206ENST00000568219 MAP2K2P36507 400 aa12.4□□□□□ -0.42
PALB2-206ENST00000568219 ATL3Q6DD88 541 aa12.4□□□□□ -0.42
PALB2-206ENST00000568219 BRAPQ7Z569 592 aa12.4□□□□□ -0.42
PALB2-206ENST00000568219 VPS37DQ86XT2 251 aa12.4□□□□□ -0.42
PALB2-206ENST00000568219 FMR1NBQ8N0W7 255 aaPredicted RBP12.4□□□□□ -0.42
PALB2-206ENST00000568219 BCAS4Q8TDM0 211 aa12.4□□□□□ -0.42
PALB2-206ENST00000568219 ZKSCAN3Q9BRR0 538 aa12.4□□□□□ -0.42
PALB2-206ENST00000568219 SAMSN1Q9NSI8 373 aaKnown RBP12.4□□□□□ -0.42
PALB2-206ENST00000568219 GOLGA6AQ9NYA3 693 aa12.4□□□□□ -0.42
PALB2-206ENST00000568219 SASH3O75995 380 aa12.39□□□□□ -0.43
PALB2-206ENST00000568219 EIF4A1P60842 406 aaKnown RBP12.39□□□□□ -0.43
PALB2-206ENST00000568219 STIM1Q13586 685 aa12.39□□□□□ -0.43
PALB2-206ENST00000568219 CCDC122Q5T0U0 273 aa12.39□□□□□ -0.43
PALB2-206ENST00000568219 CMTR1Q8N1G2 835 aaKnown RBP12.39□□□□□ -0.43
PALB2-206ENST00000568219 ZNF594Q96JF6 807 aaPredicted RBP12.39□□□□□ -0.43
PALB2-206ENST00000568219 DBNLQ9UJU6 430 aaKnown RBP12.39□□□□□ -0.43
PALB2-206ENST00000568219 GOLGA6L10A6NI86 522 aa12.39□□□□□ -0.43
PALB2-206ENST00000568219 ZBTB43O43298 467 aa12.39□□□□□ -0.43
PALB2-206ENST00000568219 CASP8Q14790 479 aa12.39□□□□□ -0.43
PALB2-206ENST00000568219 CNNM1Q9NRU3 951 aa12.39□□□□□ -0.43
PALB2-206ENST00000568219 KCNJ14Q9UNX9 436 aa12.39□□□□□ -0.43
PALB2-206ENST00000568219 TBC1D2BQ9UPU7 963 aa12.39□□□□□ -0.43
PALB2-206ENST00000568219 MINDY4BA8MYZ0 360 aa12.39□□□□□ -0.43
PALB2-206ENST00000568219 ATP1A2P50993 1020 aa12.39□□□□□ -0.43
PALB2-206ENST00000568219 KRT40Q6A162 431 aa12.39□□□□□ -0.43
PALB2-206ENST00000568219 NCAPH2Q6IBW4 605 aa12.39□□□□□ -0.43
PALB2-206ENST00000568219 GBP6Q6ZN66 633 aa12.39□□□□□ -0.43
PALB2-206ENST00000568219 ACRBPQ8NEB7 543 aa12.39□□□□□ -0.43
PALB2-206ENST00000568219 UBAC1Q9BSL1 405 aa12.39□□□□□ -0.43
PALB2-206ENST00000568219 RTEL1Q9NZ71 1219 aa12.39□□□□□ -0.43
PALB2-206ENST00000568219 SERTAD1Q9UHV2 236 aa12.39□□□□□ -0.43
PALB2-206ENST00000568219 ABCA8O94911 1581 aa12.39□□□□□ -0.43
PALB2-206ENST00000568219 IQGAP3Q86VI3 1631 aa12.38□□□□□ -0.43
PALB2-206ENST00000568219 RNF40O75150 1001 aa12.38□□□□□ -0.43
PALB2-206ENST00000568219 KRT9P35527 623 aa12.38□□□□□ -0.43
PALB2-206ENST00000568219 TDO2P48775 406 aa12.38□□□□□ -0.43
PALB2-206ENST00000568219 RNASE9P60153 205 aaKnown RBP12.38□□□□□ -0.43
PALB2-206ENST00000568219 SMYD4Q8IYR2 804 aaPredicted RBP12.38□□□□□ -0.43
PALB2-206ENST00000568219 AIDAQ96BJ3 306 aa12.38□□□□□ -0.43
PALB2-206ENST00000568219 POLD4Q9HCU8 107 aa12.38□□□□□ -0.43
PALB2-206ENST00000568219 MKRN1Q9UHC7 482 aaKnown RBP12.38□□□□□ -0.43
PALB2-206ENST00000568219 CDC23Q9UJX2 597 aa12.38□□□□□ -0.43
PALB2-206ENST00000568219 MAP3K5Q99683 1374 aa12.38□□□□□ -0.43
PALB2-206ENST00000568219 ERCC3P19447 782 aa12.38□□□□□ -0.43
PALB2-206ENST00000568219 HLTFQ14527 1009 aaKnown RBP eCLIP12.38□□□□□ -0.431e-6■■□□□ 14.5
PALB2-206ENST00000568219 MAATS1Q7Z4T9 603 aa12.38□□□□□ -0.43
PALB2-206ENST00000568219 KRI1Q8N9T8 703 aaKnown RBP12.38□□□□□ -0.43
PALB2-206ENST00000568219 IFT81Q8WYA0 676 aa12.38□□□□□ -0.43
PALB2-206ENST00000568219 L2HGDHQ9H9P8 463 aa12.38□□□□□ -0.43
PALB2-206ENST00000568219 EDC4Q6P2E9 1401 aaKnown RBP12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms