RNA–Protein interactions for RNA: ENST00000567843.1

GTF3C1-208, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 474 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-208ENST00000567843 SPDYE2Q495Y8 402 aa15.25■□□□□ 0.03
GTF3C1-208ENST00000567843 SLC10A4Q96EP9 437 aa15.25■□□□□ 0.03
GTF3C1-208ENST00000567843 SAGE1Q9NXZ1 904 aa15.25■□□□□ 0.03
GTF3C1-208ENST00000567843 PPP1R12BO60237 982 aaPredicted RBP15.24■□□□□ 0.03
GTF3C1-208ENST00000567843 ATP2B3Q16720 1220 aa15.24■□□□□ 0.03
GTF3C1-208ENST00000567843 LPIN2Q92539 896 aa15.24■□□□□ 0.03
GTF3C1-208ENST00000567843 TMEM39BQ9GZU3 492 aa15.24■□□□□ 0.03
GTF3C1-208ENST00000567843 CEP126Q9P2H0 1117 aa15.24■□□□□ 0.03
GTF3C1-208ENST00000567843 PPP2R3BQ9Y5P8 575 aa15.24■□□□□ 0.03
GTF3C1-208ENST00000567843 KIF16BQ96L93 1317 aa15.23■□□□□ 0.03
GTF3C1-208ENST00000567843 USP2O75604 605 aaPredicted RBP15.23■□□□□ 0.03
GTF3C1-208ENST00000567843 ADORA1P30542 326 aa15.23■□□□□ 0.03
GTF3C1-208ENST00000567843 SPRYD7Q5W111 196 aa15.23■□□□□ 0.03
GTF3C1-208ENST00000567843 INTS3Q68E01 1043 aaKnown RBP15.23■□□□□ 0.03
GTF3C1-208ENST00000567843 TBC1D22AQ8WUA7 517 aa15.23■□□□□ 0.03
GTF3C1-208ENST00000567843 TEKT1Q969V4 418 aa15.23■□□□□ 0.03
GTF3C1-208ENST00000567843 TRIM27P14373 513 aa15.22■□□□□ 0.03
GTF3C1-208ENST00000567843 REM2Q8IYK8 340 aaPredicted RBP15.22■□□□□ 0.03
GTF3C1-208ENST00000567843 ARHGAP45Q92619 1136 aa15.22■□□□□ 0.03
GTF3C1-208ENST00000567843 R3HDMLQ9H3Y0 253 aa15.22■□□□□ 0.03
GTF3C1-208ENST00000567843 COL1A1P02452 1464 aaPredicted RBP15.21■□□□□ 0.03
GTF3C1-208ENST00000567843 SRGAP3O43295 1099 aa15.21■□□□□ 0.03
GTF3C1-208ENST00000567843 CIAO1O76071 339 aa15.21■□□□□ 0.03
GTF3C1-208ENST00000567843 IL15P40933 162 aaPredicted RBP15.21■□□□□ 0.03
GTF3C1-208ENST00000567843 PHKA1P46020 1223 aa15.21■□□□□ 0.03
GTF3C1-208ENST00000567843 IREB2P48200 963 aaKnown RBP15.21■□□□□ 0.03
GTF3C1-208ENST00000567843 TM4SF4P48230 202 aa15.21■□□□□ 0.03
GTF3C1-208ENST00000567843 TNFAIP1Q13829 316 aa15.21■□□□□ 0.03
GTF3C1-208ENST00000567843 WNK4Q96J92 1243 aa15.21■□□□□ 0.03
GTF3C1-208ENST00000567843 TEPSINQ96N21 525 aa15.21■□□□□ 0.03
GTF3C1-208ENST00000567843 ELP3Q9H9T3 547 aa15.21■□□□□ 0.03
GTF3C1-208ENST00000567843 AKAP11Q9UKA4 1901 aa15.2■□□□□ 0.02
GTF3C1-208ENST00000567843 IPO8O15397 1037 aaKnown RBP15.2■□□□□ 0.02
GTF3C1-208ENST00000567843 GNAI3P08754 354 aa15.2■□□□□ 0.02
GTF3C1-208ENST00000567843 GJA5P36382 358 aa15.2■□□□□ 0.02
GTF3C1-208ENST00000567843 TNNI2P48788 182 aa15.2■□□□□ 0.02
GTF3C1-208ENST00000567843 TIMM10P62072 90 aa15.2■□□□□ 0.02
GTF3C1-208ENST00000567843 SREBF2Q12772 1141 aa15.2■□□□□ 0.02
GTF3C1-208ENST00000567843 DIXDC1Q155Q3 683 aa15.2■□□□□ 0.02
GTF3C1-208ENST00000567843 MAP3K11Q16584 847 aa15.2■□□□□ 0.02
GTF3C1-208ENST00000567843 APOBEC3HQ6NTF7 200 aaKnown RBP15.2■□□□□ 0.02
GTF3C1-208ENST00000567843 ATF7IPQ6VMQ6 1270 aa15.2■□□□□ 0.02
GTF3C1-208ENST00000567843 COPRSQ9NQ92 184 aa15.2■□□□□ 0.02
GTF3C1-208ENST00000567843 HDAC5Q9UQL6 1122 aa15.2■□□□□ 0.02
GTF3C1-208ENST00000567843 HDLBPQ00341 1268 aaKnown RBP15.19■□□□□ 0.02
GTF3C1-208ENST00000567843 TFCP2Q12800 502 aa15.19■□□□□ 0.02
GTF3C1-208ENST00000567843 TMEM57Q8N5G2 664 aa15.19■□□□□ 0.02
GTF3C1-208ENST00000567843 WDR66Q8TBY9 1149 aa15.19■□□□□ 0.02
GTF3C1-208ENST00000567843 ZNF296Q8WUU4 475 aaPredicted RBP15.19■□□□□ 0.02
GTF3C1-208ENST00000567843 CNKSR2Q8WXI2 1034 aa15.19■□□□□ 0.02
GTF3C1-208ENST00000567843 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.19■□□□□ 0.02
GTF3C1-208ENST00000567843 PRDX5P30044 214 aa15.18■□□□□ 0.02
GTF3C1-208ENST00000567843 ANKRD13AQ8IZ07 590 aa15.18■□□□□ 0.02
GTF3C1-208ENST00000567843 ZDHHC15Q96MV8 337 aa15.18■□□□□ 0.02
GTF3C1-208ENST00000567843 GNL3LQ9NVN8 582 aaKnown RBP15.18■□□□□ 0.02
GTF3C1-208ENST00000567843 TMOD2Q9NZR1 351 aa15.18■□□□□ 0.02
GTF3C1-208ENST00000567843 FBXO3Q9UK99 471 aa15.18■□□□□ 0.02
GTF3C1-208ENST00000567843 MANSC4A6NHS7 340 aaPredicted RBP15.17■□□□□ 0.02
GTF3C1-208ENST00000567843 GPR25O00155 361 aa15.17■□□□□ 0.02
GTF3C1-208ENST00000567843 IGF2BP3O00425 579 aaKnown RBP eCLIP15.17■□□□□ 0.02
GTF3C1-208ENST00000567843 GNAI2P04899 355 aa15.17■□□□□ 0.02
GTF3C1-208ENST00000567843 ZKSCAN2Q63HK3 967 aa15.17■□□□□ 0.02
GTF3C1-208ENST00000567843 CCDC102BQ68D86 513 aa15.17■□□□□ 0.02
GTF3C1-208ENST00000567843 CTU1Q7Z7A3 348 aaKnown RBP15.17■□□□□ 0.02
GTF3C1-208ENST00000567843 NEUROD6Q96NK8 337 aa15.17■□□□□ 0.02
GTF3C1-208ENST00000567843 ECM29Q5VYK3 1845 aa15.17■□□□□ 0.02
GTF3C1-208ENST00000567843 MAST3O60307 1309 aa15.17■□□□□ 0.02
GTF3C1-208ENST00000567843 PNMA6EA0A0J9YXQ4 647 aa15.16■□□□□ 0.02
GTF3C1-208ENST00000567843 A0A1B0GUL7 405 aa15.16■□□□□ 0.02
GTF3C1-208ENST00000567843 LDHBP07195 334 aaKnown RBP15.16■□□□□ 0.02
GTF3C1-208ENST00000567843 ZBTB48P10074 688 aaPredicted RBP15.16■□□□□ 0.02
GTF3C1-208ENST00000567843 HHIPL2Q6UWX4 724 aa15.16■□□□□ 0.02
GTF3C1-208ENST00000567843 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.16■□□□□ 0.02
GTF3C1-208ENST00000567843 IFNL1Q8IU54 200 aa15.16■□□□□ 0.02
GTF3C1-208ENST00000567843 OPTNQ96CV9 577 aa15.16■□□□□ 0.02
GTF3C1-208ENST00000567843 C1orf115Q9H7X2 142 aa15.16■□□□□ 0.02
GTF3C1-208ENST00000567843 SUGT1Q9Y2Z0 365 aa15.16■□□□□ 0.02
GTF3C1-208ENST00000567843 DAGLAQ9Y4D2 1042 aa15.16■□□□□ 0.02
GTF3C1-208ENST00000567843 MAP3K9P80192 1104 aa15.15■□□□□ 0.02
GTF3C1-208ENST00000567843 TCP10Q12799 353 aa15.15■□□□□ 0.02
GTF3C1-208ENST00000567843 NFIAQ12857 509 aa15.15■□□□□ 0.02
GTF3C1-208ENST00000567843 VGLL4Q14135 290 aa15.15■□□□□ 0.02
GTF3C1-208ENST00000567843 CDC42EP5Q6NZY7 148 aa15.15■□□□□ 0.02
GTF3C1-208ENST00000567843 MIGA2Q7L4E1 593 aa15.15■□□□□ 0.02
GTF3C1-208ENST00000567843 XAGE2Q96GT9 111 aa15.15■□□□□ 0.02
GTF3C1-208ENST00000567843 MRIQ9BWK5 157 aa15.15■□□□□ 0.02
GTF3C1-208ENST00000567843 ABCF2Q9UG63 623 aa15.15■□□□□ 0.02
GTF3C1-208ENST00000567843 DENND2AQ9ULE3 1009 aa15.15■□□□□ 0.02
GTF3C1-208ENST00000567843 ARAP2Q8WZ64 1704 aa15.14■□□□□ 0.01
GTF3C1-208ENST00000567843 FKTNO75072 461 aa15.14■□□□□ 0.01
GTF3C1-208ENST00000567843 SOX10P56693 466 aa15.14■□□□□ 0.01
GTF3C1-208ENST00000567843 MTX1Q13505 466 aa15.14■□□□□ 0.01
GTF3C1-208ENST00000567843 RASGRF1Q13972 1273 aa15.14■□□□□ 0.01
GTF3C1-208ENST00000567843 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.14■□□□□ 0.01
GTF3C1-208ENST00000567843 ZKSCAN4Q969J2 545 aaPredicted RBP15.14■□□□□ 0.01
GTF3C1-208ENST00000567843 OTUD5Q96G74 571 aa15.14■□□□□ 0.01
GTF3C1-208ENST00000567843 PTPN18Q99952 460 aa15.14■□□□□ 0.01
GTF3C1-208ENST00000567843 USP40Q9NVE5 1235 aa15.14■□□□□ 0.01
GTF3C1-208ENST00000567843 RLBP1P12271 317 aa15.13■□□□□ 0.01
GTF3C1-208ENST00000567843 INHBEP58166 350 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms