RNA–Protein interactions for RNA: ENST00000567710.5

NSMCE1-213, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 472 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-213ENST00000567710 SULF1Q8IWU6 871 aa13.2□□□□□ -0.3
NSMCE1-213ENST00000567710 CLASRPQ8N2M8 674 aaKnown RBP13.2□□□□□ -0.3
NSMCE1-213ENST00000567710 SPATA5Q8NB90 893 aa13.2□□□□□ -0.3
NSMCE1-213ENST00000567710 EXOC6Q8TAG9 804 aa13.2□□□□□ -0.3
NSMCE1-213ENST00000567710 DCTPP1Q9H773 170 aa13.2□□□□□ -0.3
NSMCE1-213ENST00000567710 HMG20BQ9P0W2 317 aa13.2□□□□□ -0.3
NSMCE1-213ENST00000567710 MAST3O60307 1309 aa13.19□□□□□ -0.3
NSMCE1-213ENST00000567710 AOX1Q06278 1338 aa13.19□□□□□ -0.3
NSMCE1-213ENST00000567710 LDHBP07195 334 aaKnown RBP13.19□□□□□ -0.3
NSMCE1-213ENST00000567710 HDLBPQ00341 1268 aaKnown RBP13.19□□□□□ -0.3
NSMCE1-213ENST00000567710 AAMPQ13685 434 aa13.19□□□□□ -0.3
NSMCE1-213ENST00000567710 DLK2Q6UY11 383 aa13.19□□□□□ -0.3
NSMCE1-213ENST00000567710 ZGPATQ8N5A5 531 aaKnown RBP13.19□□□□□ -0.3
NSMCE1-213ENST00000567710 PRMT6Q96LA8 375 aaPredicted RBP13.19□□□□□ -0.3
NSMCE1-213ENST00000567710 SCAF8Q9UPN6 1271 aaKnown RBP13.19□□□□□ -0.3
NSMCE1-213ENST00000567710 TMEM88BA6NKF7 163 aa13.18□□□□□ -0.3
NSMCE1-213ENST00000567710 MYO1BO43795 1136 aa13.18□□□□□ -0.3
NSMCE1-213ENST00000567710 TEKT1Q969V4 418 aa13.18□□□□□ -0.3
NSMCE1-213ENST00000567710 ZNF512BQ96KM6 892 aaPredicted RBP13.18□□□□□ -0.3
NSMCE1-213ENST00000567710 MRIQ9BWK5 157 aa13.18□□□□□ -0.3
NSMCE1-213ENST00000567710 LRRCC1Q9C099 1032 aa13.18□□□□□ -0.3
NSMCE1-213ENST00000567710 BCL11AQ9H165 835 aa13.18□□□□□ -0.3
NSMCE1-213ENST00000567710 CREBZFQ9NS37 354 aa13.18□□□□□ -0.3
NSMCE1-213ENST00000567710 ABCF2Q9UG63 623 aa13.18□□□□□ -0.3
NSMCE1-213ENST00000567710 CLRN2A0PK11 232 aa13.17□□□□□ -0.3
NSMCE1-213ENST00000567710 SMARCA5O60264 1052 aaPredicted RBP13.17□□□□□ -0.3
NSMCE1-213ENST00000567710 CELF2O95319 508 aaKnown RBP13.17□□□□□ -0.3
NSMCE1-213ENST00000567710 IFIT2P09913 472 aaKnown RBP13.17□□□□□ -0.3
NSMCE1-213ENST00000567710 DIXDC1Q155Q3 683 aa13.17□□□□□ -0.3
NSMCE1-213ENST00000567710 CST9Q5W186 159 aa13.17□□□□□ -0.3
NSMCE1-213ENST00000567710 APOBEC3FQ8IUX4 373 aaKnown RBP13.17□□□□□ -0.3
NSMCE1-213ENST00000567710 ZDHHC15Q96MV8 337 aa13.17□□□□□ -0.3
NSMCE1-213ENST00000567710 ZNF408Q9H9D4 720 aa13.17□□□□□ -0.3
NSMCE1-213ENST00000567710 SNRKQ9NRH2 765 aa13.17□□□□□ -0.3
NSMCE1-213ENST00000567710 IRX6P78412 446 aaPredicted RBP13.16□□□□□ -0.3
NSMCE1-213ENST00000567710 HDAC1Q13547 482 aaPredicted RBP13.16□□□□□ -0.3
NSMCE1-213ENST00000567710 SPDYE2Q495Y8 402 aa13.16□□□□□ -0.3
NSMCE1-213ENST00000567710 SPTY2D1Q68D10 685 aaPredicted RBP13.16□□□□□ -0.3
NSMCE1-213ENST00000567710 APOBEC3HQ6NTF7 200 aaKnown RBP13.16□□□□□ -0.3
NSMCE1-213ENST00000567710 HHIPL2Q6UWX4 724 aa13.16□□□□□ -0.3
NSMCE1-213ENST00000567710 TBC1D9Q6ZT07 1266 aa13.16□□□□□ -0.3
NSMCE1-213ENST00000567710 ERICH6Q7L0X2 663 aa13.16□□□□□ -0.3
NSMCE1-213ENST00000567710 DZIP1Q86YF9 867 aaKnown RBP13.16□□□□□ -0.3
NSMCE1-213ENST00000567710 CDCA5Q96FF9 252 aa13.16□□□□□ -0.3
NSMCE1-213ENST00000567710 TDRD3Q9H7E2 651 aaKnown RBP13.16□□□□□ -0.3
NSMCE1-213ENST00000567710 VEZTQ9HBM0 779 aa13.16□□□□□ -0.3
NSMCE1-213ENST00000567710 DAGLAQ9Y4D2 1042 aa13.16□□□□□ -0.3
NSMCE1-213ENST00000567710 POLR2AP24928 1970 aaKnown RBP13.16□□□□□ -0.3
NSMCE1-213ENST00000567710 CYP2E1P05181 493 aaPredicted RBP13.15□□□□□ -0.3
NSMCE1-213ENST00000567710 ZAP70P43403 619 aa13.15□□□□□ -0.3
NSMCE1-213ENST00000567710 ZNF70Q9UC06 446 aaPredicted RBP13.15□□□□□ -0.3
NSMCE1-213ENST00000567710 TRPM7Q96QT4 1865 aa13.14□□□□□ -0.31
NSMCE1-213ENST00000567710 ECM29Q5VYK3 1845 aa13.14□□□□□ -0.31
NSMCE1-213ENST00000567710 AKAP11Q9UKA4 1901 aa13.14□□□□□ -0.31
NSMCE1-213ENST00000567710 MECOMQ03112 1051 aa13.14□□□□□ -0.31
NSMCE1-213ENST00000567710 PRAMEF18Q5VWM3 479 aa13.14□□□□□ -0.31
NSMCE1-213ENST00000567710 ZNF384Q8TF68 577 aa13.14□□□□□ -0.31
NSMCE1-213ENST00000567710 DEFB129Q9H1M3 183 aa13.14□□□□□ -0.31
NSMCE1-213ENST00000567710 ABT1Q9ULW3 272 aaKnown RBP13.14□□□□□ -0.31
NSMCE1-213ENST00000567710 NDUFB9Q9Y6M9 179 aa13.14□□□□□ -0.31
NSMCE1-213ENST00000567710 GAKO14976 1311 aa13.13□□□□□ -0.31
NSMCE1-213ENST00000567710 TNFAIP1Q13829 316 aa13.13□□□□□ -0.31
NSMCE1-213ENST00000567710 SLF2Q8IX21 1173 aa13.13□□□□□ -0.31
NSMCE1-213ENST00000567710 DNAJC5GQ8N7S2 189 aa13.13□□□□□ -0.31
NSMCE1-213ENST00000567710 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.13□□□□□ -0.31
NSMCE1-213ENST00000567710 NSUN4Q96CB9 384 aaKnown RBP13.13□□□□□ -0.31
NSMCE1-213ENST00000567710 RAI14Q9P0K7 980 aa13.13□□□□□ -0.31
NSMCE1-213ENST00000567710 LRP2BPQ9P2M1 347 aa13.13□□□□□ -0.31
NSMCE1-213ENST00000567710 PPP2R3BQ9Y5P8 575 aa13.13□□□□□ -0.31
NSMCE1-213ENST00000567710 TLL2Q9Y6L7 1015 aa13.13□□□□□ -0.31
NSMCE1-213ENST00000567710 CNTNAP1P78357 1384 aa13.12□□□□□ -0.31
NSMCE1-213ENST00000567710 TCP10L2B9ZVM9 353 aa13.12□□□□□ -0.31
NSMCE1-213ENST00000567710 CACNB3P54284 484 aa13.12□□□□□ -0.31
NSMCE1-213ENST00000567710 RASA3Q14644 834 aa13.12□□□□□ -0.31
NSMCE1-213ENST00000567710 SAPCD2Q86UD0 394 aa13.12□□□□□ -0.31
NSMCE1-213ENST00000567710 GCC1Q96CN9 775 aa13.12□□□□□ -0.31
NSMCE1-213ENST00000567710 FAM163AQ96GL9 167 aaPredicted RBP13.12□□□□□ -0.31
NSMCE1-213ENST00000567710 GBA2Q9HCG7 927 aaPredicted RBP13.12□□□□□ -0.31
NSMCE1-213ENST00000567710 PIH1D3Q9NQM4 214 aaKnown RBP13.12□□□□□ -0.31
NSMCE1-213ENST00000567710 TMOD2Q9NZR1 351 aa13.12□□□□□ -0.31
NSMCE1-213ENST00000567710 MKRN1Q9UHC7 482 aaKnown RBP13.12□□□□□ -0.31
NSMCE1-213ENST00000567710 MROH7-TTC4A0A0A0MT08 1334 aa13.12□□□□□ -0.31
NSMCE1-213ENST00000567710 RASSF10A6NK89 507 aa13.11□□□□□ -0.31
NSMCE1-213ENST00000567710 ATP5JP18859 108 aa13.11□□□□□ -0.31
NSMCE1-213ENST00000567710 BTDP43251 543 aa13.11□□□□□ -0.31
NSMCE1-213ENST00000567710 GSTO1P78417 241 aa13.11□□□□□ -0.31
NSMCE1-213ENST00000567710 CDC42EP5Q6NZY7 148 aa13.11□□□□□ -0.31
NSMCE1-213ENST00000567710 C2orf69Q8N8R5 385 aa13.11□□□□□ -0.31
NSMCE1-213ENST00000567710 KLRG1Q96E93 195 aa13.11□□□□□ -0.31
NSMCE1-213ENST00000567710 RWDD1Q9H446 243 aaPredicted RBP13.11□□□□□ -0.31
NSMCE1-213ENST00000567710 ANTXR1Q9H6X2 564 aa13.11□□□□□ -0.31
NSMCE1-213ENST00000567710 IGSF3O75054 1194 aa13.1□□□□□ -0.31
NSMCE1-213ENST00000567710 IGHDP01880 384 aa13.1□□□□□ -0.31
NSMCE1-213ENST00000567710 LDHCP07864 332 aa13.1□□□□□ -0.31
NSMCE1-213ENST00000567710 NF2P35240 595 aa13.1□□□□□ -0.31
NSMCE1-213ENST00000567710 TNNI2P48788 182 aa13.1□□□□□ -0.31
NSMCE1-213ENST00000567710 DEFB115Q30KQ5 88 aa13.1□□□□□ -0.31
NSMCE1-213ENST00000567710 ANKRD45Q5TZF3 282 aa13.1□□□□□ -0.31
NSMCE1-213ENST00000567710 FKBP1CQ5VVH2 108 aa13.1□□□□□ -0.31
NSMCE1-213ENST00000567710 NAA16Q6N069 864 aaPredicted RBP13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms