RNA–Protein interactions for RNA: ENST00000567704.5

CSPG4P13-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 13, humanhuman

BASIC

Gene CSPG4P13, Length 4,801 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P13-202ENST00000567704 LLPHQ9BRT6 129 aaKnown RBP14.01□□□□□ -0.17
CSPG4P13-202ENST00000567704 VAT1LQ9HCJ6 419 aa14.01□□□□□ -0.17
CSPG4P13-202ENST00000567704 SHANK2Q9UPX8 1470 aa14□□□□□ -0.17
CSPG4P13-202ENST00000567704 C8orf74Q6P047 294 aa14□□□□□ -0.17
CSPG4P13-202ENST00000567704 ZNF444Q8N0Y2 327 aaPredicted RBP14□□□□□ -0.17
CSPG4P13-202ENST00000567704 UBLCP1Q8WVY7 318 aaPredicted RBP14□□□□□ -0.17
CSPG4P13-202ENST00000567704 GPTP24298 496 aa14□□□□□ -0.17
CSPG4P13-202ENST00000567704 ARHGAP25P42331 645 aa14□□□□□ -0.17
CSPG4P13-202ENST00000567704 SARNPP82979 210 aaKnown RBP14□□□□□ -0.17
CSPG4P13-202ENST00000567704 C6orf163Q5TEZ5 329 aa14□□□□□ -0.17
CSPG4P13-202ENST00000567704 RRP15Q9Y3B9 282 aaKnown RBP14□□□□□ -0.17
CSPG4P13-202ENST00000567704 ZNF521Q96K83 1311 aa14□□□□□ -0.17
CSPG4P13-202ENST00000567704 SLC9C2Q5TAH2 1124 aa14□□□□□ -0.17
CSPG4P13-202ENST00000567704 CYP26C1Q6V0L0 522 aa14□□□□□ -0.17
CSPG4P13-202ENST00000567704 SLF1Q9BQI6 1058 aa14□□□□□ -0.17
CSPG4P13-202ENST00000567704 PDE11AQ9HCR9 933 aa14□□□□□ -0.17
CSPG4P13-202ENST00000567704 CAPN7Q9Y6W3 813 aa14□□□□□ -0.17
CSPG4P13-202ENST00000567704 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14□□□□□ -0.17
CSPG4P13-202ENST00000567704 RNF113AO15541 343 aaKnown RBP13.99□□□□□ -0.17
CSPG4P13-202ENST00000567704 KRT9P35527 623 aa13.99□□□□□ -0.17
CSPG4P13-202ENST00000567704 TERF2Q15554 542 aa13.99□□□□□ -0.17
CSPG4P13-202ENST00000567704 TRMT44Q8IYL2 757 aaKnown RBP13.99□□□□□ -0.17
CSPG4P13-202ENST00000567704 CABS1Q96KC9 395 aa13.99□□□□□ -0.17
CSPG4P13-202ENST00000567704 KRT23Q9C075 422 aa13.99□□□□□ -0.17
CSPG4P13-202ENST00000567704 TRMT112Q9UI30 125 aaKnown RBP13.99□□□□□ -0.17
CSPG4P13-202ENST00000567704 AOX1Q06278 1338 aa13.99□□□□□ -0.17
CSPG4P13-202ENST00000567704 TSPY2A6NKD2 308 aa13.99□□□□□ -0.17
CSPG4P13-202ENST00000567704 POLR2DO15514 142 aaKnown RBP13.99□□□□□ -0.17
CSPG4P13-202ENST00000567704 KRT13P13646 458 aa13.99□□□□□ -0.17
CSPG4P13-202ENST00000567704 RNASE9P60153 205 aaKnown RBP13.99□□□□□ -0.17
CSPG4P13-202ENST00000567704 TNNC1P63316 161 aa13.99□□□□□ -0.17
CSPG4P13-202ENST00000567704 TFCP2Q12800 502 aa13.99□□□□□ -0.17
CSPG4P13-202ENST00000567704 KIAA1468Q9P260 1216 aa13.99□□□□□ -0.17
CSPG4P13-202ENST00000567704 POTEJP0CG39 1038 aa13.99□□□□□ -0.17
CSPG4P13-202ENST00000567704 ATP6V1AP38606 617 aa13.99□□□□□ -0.17
CSPG4P13-202ENST00000567704 HNRNPH2P55795 449 aaKnown RBP13.99□□□□□ -0.17
CSPG4P13-202ENST00000567704 PROSER2Q86WR7 435 aaPredicted RBP13.99□□□□□ -0.17
CSPG4P13-202ENST00000567704 TMTC2Q8N394 836 aa13.99□□□□□ -0.17
CSPG4P13-202ENST00000567704 IQUBQ8NA54 791 aa13.99□□□□□ -0.17
CSPG4P13-202ENST00000567704 PNMA8AQ86V59 439 aaPredicted RBP13.99□□□□□ -0.17
CSPG4P13-202ENST00000567704 TMTC1Q8IUR5 882 aa13.99□□□□□ -0.17
CSPG4P13-202ENST00000567704 TM6SF1Q9BZW5 370 aa13.99□□□□□ -0.17
CSPG4P13-202ENST00000567704 MAPK8IP1Q9UQF2 711 aa13.99□□□□□ -0.17
CSPG4P13-202ENST00000567704 PPP2R2CQ9Y2T4 447 aa13.99□□□□□ -0.17
CSPG4P13-202ENST00000567704 A0A1W2PP64 1363 aa13.99□□□□□ -0.17
CSPG4P13-202ENST00000567704 CFAP74Q9C0B2 1584 aa13.99□□□□□ -0.17
CSPG4P13-202ENST00000567704 PPFIA1Q13136 1202 aa13.98□□□□□ -0.17
CSPG4P13-202ENST00000567704 CAVIN4Q5BKX8 364 aa13.98□□□□□ -0.17
CSPG4P13-202ENST00000567704 MLKLQ8NB16 471 aa13.98□□□□□ -0.17
CSPG4P13-202ENST00000567704 PSMB7Q99436 277 aa13.98□□□□□ -0.17
CSPG4P13-202ENST00000567704 CTNND2Q9UQB3 1225 aa13.98□□□□□ -0.17
CSPG4P13-202ENST00000567704 STARD3NLO95772 234 aa13.98□□□□□ -0.17
CSPG4P13-202ENST00000567704 VIMP08670 466 aaKnown RBP13.98□□□□□ -0.17
CSPG4P13-202ENST00000567704 TDRD7Q8NHU6 1098 aaKnown RBP13.98□□□□□ -0.17
CSPG4P13-202ENST00000567704 MAGI3Q5TCQ9 1506 aa13.98□□□□□ -0.17
CSPG4P13-202ENST00000567704 A6NNZ2 444 aa13.98□□□□□ -0.17
CSPG4P13-202ENST00000567704 TUBB8Q3ZCM7 444 aa13.98□□□□□ -0.17
CSPG4P13-202ENST00000567704 NAA16Q6N069 864 aaPredicted RBP13.98□□□□□ -0.17
CSPG4P13-202ENST00000567704 BANK1Q8NDB2 785 aa13.98□□□□□ -0.17
CSPG4P13-202ENST00000567704 USP28Q96RU2 1077 aa13.98□□□□□ -0.17
CSPG4P13-202ENST00000567704 SERPINA10Q9UK55 444 aa13.98□□□□□ -0.17
CSPG4P13-202ENST00000567704 TBC1D8BQ0IIM8 1120 aa13.98□□□□□ -0.17
CSPG4P13-202ENST00000567704 SF3A3Q12874 501 aaKnown RBP eCLIP13.98□□□□□ -0.17
CSPG4P13-202ENST00000567704 FBXO38Q6PIJ6 1188 aa13.98□□□□□ -0.17
CSPG4P13-202ENST00000567704 JAKMIP2Q96AA8 810 aa13.98□□□□□ -0.17
CSPG4P13-202ENST00000567704 PLIN2Q99541 437 aa13.98□□□□□ -0.17
CSPG4P13-202ENST00000567704 CABP5Q9NP86 173 aa13.98□□□□□ -0.17
CSPG4P13-202ENST00000567704 CPSF2Q9P2I0 782 aaKnown RBP13.98□□□□□ -0.17
CSPG4P13-202ENST00000567704 CEP83Q9Y592 693 aa13.98□□□□□ -0.17
CSPG4P13-202ENST00000567704 NCBP1Q09161 790 aaKnown RBP13.97□□□□□ -0.17
CSPG4P13-202ENST00000567704 IL15P40933 162 aaPredicted RBP13.97□□□□□ -0.17
CSPG4P13-202ENST00000567704 LACTBP83111 547 aaPredicted RBP13.97□□□□□ -0.17
CSPG4P13-202ENST00000567704 SLC4A8Q2Y0W8 1093 aa13.97□□□□□ -0.17
CSPG4P13-202ENST00000567704 BCAS4Q8TDM0 211 aa13.97□□□□□ -0.17
CSPG4P13-202ENST00000567704 CNNM2Q9H8M5 875 aa13.97□□□□□ -0.17
CSPG4P13-202ENST00000567704 ZNF287Q9HBT7 754 aa13.97□□□□□ -0.17
CSPG4P13-202ENST00000567704 ABCC4O15439 1325 aa13.97□□□□□ -0.17
CSPG4P13-202ENST00000567704 PSDA5PKW4 1024 aaPredicted RBP13.97□□□□□ -0.17
CSPG4P13-202ENST00000567704 BUB1BO60566 1050 aaPredicted RBP13.97□□□□□ -0.17
CSPG4P13-202ENST00000567704 GNGT1P63211 74 aa13.97□□□□□ -0.17
CSPG4P13-202ENST00000567704 PPP1R13BQ96KQ4 1090 aa13.97□□□□□ -0.17
CSPG4P13-202ENST00000567704 STMN4Q9H169 189 aaPredicted RBP13.97□□□□□ -0.17
CSPG4P13-202ENST00000567704 KAT14Q9H8E8 782 aa13.97□□□□□ -0.17
CSPG4P13-202ENST00000567704 RASAL2Q9UJF2 1139 aa13.97□□□□□ -0.17
CSPG4P13-202ENST00000567704 TPCN1Q9ULQ1 816 aa13.97□□□□□ -0.17
CSPG4P13-202ENST00000567704 EIF2AK4Q9P2K8 1649 aaKnown RBP13.97□□□□□ -0.17
CSPG4P13-202ENST00000567704 VWA3AA6NCI4 1184 aa13.97□□□□□ -0.17
CSPG4P13-202ENST00000567704 IFIT1BQ5T764 474 aaKnown RBP13.97□□□□□ -0.17
CSPG4P13-202ENST00000567704 BICC1Q9H694 974 aaKnown RBP13.97□□□□□ -0.17
CSPG4P13-202ENST00000567704 PTH1RQ03431 593 aa13.96□□□□□ -0.17
CSPG4P13-202ENST00000567704 ESR2Q92731 530 aa13.96□□□□□ -0.17
CSPG4P13-202ENST00000567704 KCNK9Q9NPC2 374 aa13.96□□□□□ -0.17
CSPG4P13-202ENST00000567704 SHROOM2Q13796 1616 aa13.96□□□□□ -0.17
CSPG4P13-202ENST00000567704 PUS7Q96PZ0 661 aaKnown RBP13.96□□□□□ -0.17
CSPG4P13-202ENST00000567704 PRDM11Q9NQV5 511 aa13.96□□□□□ -0.17
CSPG4P13-202ENST00000567704 RGS12O14924 1447 aa13.96□□□□□ -0.17
CSPG4P13-202ENST00000567704 MCM7P33993 719 aa13.96□□□□□ -0.18
CSPG4P13-202ENST00000567704 CLCN6P51797 869 aa13.96□□□□□ -0.18
CSPG4P13-202ENST00000567704 CETN1Q12798 172 aa13.96□□□□□ -0.18
CSPG4P13-202ENST00000567704 SLC39A6Q13433 755 aa13.96□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms