RNA–Protein interactions for RNA: ENST00000567638.1

SCAMP2-209, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 2

Gene SCAMP2, Length 678 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-209ENST00000567638 CLMNQ96JQ2 1002 aa18.82■□□□□ 0.6
SCAMP2-209ENST00000567638 TBC1D8O95759 1140 aa18.81■□□□□ 0.6
SCAMP2-209ENST00000567638 SLC5A1P13866 664 aa18.81■□□□□ 0.6
SCAMP2-209ENST00000567638 RARSP54136 660 aaKnown RBP18.81■□□□□ 0.6
SCAMP2-209ENST00000567638 HDLBPQ00341 1268 aaKnown RBP18.81■□□□□ 0.6
SCAMP2-209ENST00000567638 ATG9AQ7Z3C6 839 aa18.81■□□□□ 0.6
SCAMP2-209ENST00000567638 SLC10A4Q96EP9 437 aa18.81■□□□□ 0.6
SCAMP2-209ENST00000567638 FBXO3Q9UK99 471 aa18.81■□□□□ 0.6
SCAMP2-209ENST00000567638 ZBTB48P10074 688 aaPredicted RBP18.8■□□□□ 0.6
SCAMP2-209ENST00000567638 IREB2P48200 963 aaKnown RBP18.8■□□□□ 0.6
SCAMP2-209ENST00000567638 CTU1Q7Z7A3 348 aaKnown RBP18.8■□□□□ 0.6
SCAMP2-209ENST00000567638 LPIN2Q92539 896 aa18.8■□□□□ 0.6
SCAMP2-209ENST00000567638 TEKT1Q969V4 418 aa18.8■□□□□ 0.6
SCAMP2-209ENST00000567638 WNK4Q96J92 1243 aa18.8■□□□□ 0.6
SCAMP2-209ENST00000567638 HDAC5Q9UQL6 1122 aa18.8■□□□□ 0.6
SCAMP2-209ENST00000567638 LRRFIP2Q9Y608 721 aaKnown RBP18.8■□□□□ 0.6
SCAMP2-209ENST00000567638 MAST3O60307 1309 aa18.79■□□□□ 0.6
SCAMP2-209ENST00000567638 MANSC4A6NHS7 340 aaPredicted RBP18.79■□□□□ 0.6
SCAMP2-209ENST00000567638 USP2O75604 605 aaPredicted RBP18.79■□□□□ 0.6
SCAMP2-209ENST00000567638 CIAO1O76071 339 aa18.79■□□□□ 0.6
SCAMP2-209ENST00000567638 NOM1Q5C9Z4 860 aaKnown RBP18.79■□□□□ 0.6
SCAMP2-209ENST00000567638 ARHGAP45Q92619 1136 aa18.79■□□□□ 0.6
SCAMP2-209ENST00000567638 TEPSINQ96N21 525 aa18.79■□□□□ 0.6
SCAMP2-209ENST00000567638 CFHR5Q9BXR6 569 aa18.79■□□□□ 0.6
SCAMP2-209ENST00000567638 SIL1Q9H173 461 aa18.79■□□□□ 0.6
SCAMP2-209ENST00000567638 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.79■□□□□ 0.6
SCAMP2-209ENST00000567638 SUGT1Q9Y2Z0 365 aa18.79■□□□□ 0.6
SCAMP2-209ENST00000567638 TCP10L2B9ZVM9 353 aa18.78■□□□□ 0.6
SCAMP2-209ENST00000567638 TNNI2P48788 182 aa18.78■□□□□ 0.6
SCAMP2-209ENST00000567638 RGS19P49795 217 aa18.78■□□□□ 0.6
SCAMP2-209ENST00000567638 ANKRD13AQ8IZ07 590 aa18.78■□□□□ 0.6
SCAMP2-209ENST00000567638 ZNF296Q8WUU4 475 aaPredicted RBP18.78■□□□□ 0.6
SCAMP2-209ENST00000567638 MEIS3Q99687 375 aa18.78■□□□□ 0.6
SCAMP2-209ENST00000567638 MRIQ9BWK5 157 aa18.78■□□□□ 0.6
SCAMP2-209ENST00000567638 GPR25O00155 361 aa18.77■□□□□ 0.6
SCAMP2-209ENST00000567638 ALDH1A1P00352 501 aa18.77■□□□□ 0.6
SCAMP2-209ENST00000567638 INHBEP58166 350 aa18.77■□□□□ 0.6
SCAMP2-209ENST00000567638 ATP2B3Q16720 1220 aa18.77■□□□□ 0.6
SCAMP2-209ENST00000567638 INTS3Q68E01 1043 aaKnown RBP18.77■□□□□ 0.6
SCAMP2-209ENST00000567638 CDAN1Q8IWY9 1227 aa18.77■□□□□ 0.6
SCAMP2-209ENST00000567638 ZDHHC15Q96MV8 337 aa18.77■□□□□ 0.6
SCAMP2-209ENST00000567638 TMEM39BQ9GZU3 492 aa18.77■□□□□ 0.6
SCAMP2-209ENST00000567638 AK9Q5TCS8 1911 aa18.76■□□□□ 0.59
SCAMP2-209ENST00000567638 IFNL1Q8IU54 200 aa18.76■□□□□ 0.59
SCAMP2-209ENST00000567638 WDR66Q8TBY9 1149 aa18.76■□□□□ 0.59
SCAMP2-209ENST00000567638 CEP126Q9P2H0 1117 aa18.76■□□□□ 0.59
SCAMP2-209ENST00000567638 MYH2Q9UKX2 1941 aa18.76■□□□□ 0.59
SCAMP2-209ENST00000567638 GJA5P36382 358 aa18.75■□□□□ 0.59
SCAMP2-209ENST00000567638 IL15P40933 162 aaPredicted RBP18.75■□□□□ 0.59
SCAMP2-209ENST00000567638 CACNB3P54284 484 aa18.75■□□□□ 0.59
SCAMP2-209ENST00000567638 COPRSQ9NQ92 184 aa18.75■□□□□ 0.59
SCAMP2-209ENST00000567638 TMOD2Q9NZR1 351 aa18.75■□□□□ 0.59
SCAMP2-209ENST00000567638 PA2G4Q9UQ80 394 aaKnown RBP18.75■□□□□ 0.59
SCAMP2-209ENST00000567638 IGF2BP3O00425 579 aaKnown RBP eCLIP18.74■□□□□ 0.59
SCAMP2-209ENST00000567638 GNAI3P08754 354 aa18.74■□□□□ 0.59
SCAMP2-209ENST00000567638 MLLT1Q03111 559 aaPredicted RBP18.74■□□□□ 0.59
SCAMP2-209ENST00000567638 APOBEC3HQ6NTF7 200 aaKnown RBP18.74■□□□□ 0.59
SCAMP2-209ENST00000567638 HHIPL2Q6UWX4 724 aa18.74■□□□□ 0.59
SCAMP2-209ENST00000567638 R3HDMLQ9H3Y0 253 aa18.74■□□□□ 0.59
SCAMP2-209ENST00000567638 RPAP1Q9BWH6 1393 aaPredicted RBP18.73■□□□□ 0.59
SCAMP2-209ENST00000567638 PKN2Q16513 984 aaKnown RBP18.73■□□□□ 0.59
SCAMP2-209ENST00000567638 FKBP1CQ5VVH2 108 aa18.73■□□□□ 0.59
SCAMP2-209ENST00000567638 ELP3Q9H9T3 547 aa18.73■□□□□ 0.59
SCAMP2-209ENST00000567638 DOCK2Q92608 1830 aa18.72■□□□□ 0.59
SCAMP2-209ENST00000567638 IPO8O15397 1037 aaKnown RBP18.72■□□□□ 0.59
SCAMP2-209ENST00000567638 FKTNO75072 461 aa18.72■□□□□ 0.59
SCAMP2-209ENST00000567638 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.72■□□□□ 0.59
SCAMP2-209ENST00000567638 FAM83AQ86UY5 434 aa18.72■□□□□ 0.59
SCAMP2-209ENST00000567638 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.72■□□□□ 0.59
SCAMP2-209ENST00000567638 OPTNQ96CV9 577 aa18.72■□□□□ 0.59
SCAMP2-209ENST00000567638 GNL3LQ9NVN8 582 aaKnown RBP18.72■□□□□ 0.59
SCAMP2-209ENST00000567638 SEMA3EO15041 775 aa18.71■□□□□ 0.59
SCAMP2-209ENST00000567638 TRIM27P14373 513 aa18.71■□□□□ 0.59
SCAMP2-209ENST00000567638 PHKA1P46020 1223 aa18.71■□□□□ 0.59
SCAMP2-209ENST00000567638 MTX1Q13505 466 aa18.71■□□□□ 0.59
SCAMP2-209ENST00000567638 VGLL4Q14135 290 aa18.71■□□□□ 0.59
SCAMP2-209ENST00000567638 ATF7IPQ6VMQ6 1270 aa18.71■□□□□ 0.59
SCAMP2-209ENST00000567638 SALL1Q9NSC2 1324 aa18.71■□□□□ 0.59
SCAMP2-209ENST00000567638 TESPA1A2RU30 521 aaPredicted RBP18.7■□□□□ 0.58
SCAMP2-209ENST00000567638 ZBTB22O15209 634 aa18.7■□□□□ 0.58
SCAMP2-209ENST00000567638 SRGAP3O43295 1099 aa18.7■□□□□ 0.58
SCAMP2-209ENST00000567638 BCAR3O75815 825 aa18.7■□□□□ 0.58
SCAMP2-209ENST00000567638 PRDX5P30044 214 aa18.7■□□□□ 0.58
SCAMP2-209ENST00000567638 MAP3K9P80192 1104 aa18.7■□□□□ 0.58
SCAMP2-209ENST00000567638 OTUD7BQ6GQQ9 843 aa18.7■□□□□ 0.58
SCAMP2-209ENST00000567638 DENND2AQ9ULE3 1009 aa18.7■□□□□ 0.58
SCAMP2-209ENST00000567638 HPS5Q9UPZ3 1129 aa18.7■□□□□ 0.58
SCAMP2-209ENST00000567638 TNNQ9UQP3 1299 aa18.7■□□□□ 0.58
SCAMP2-209ENST00000567638 DAGLAQ9Y4D2 1042 aa18.7■□□□□ 0.58
SCAMP2-209ENST00000567638 CSADQ9Y600 493 aa18.7■□□□□ 0.58
SCAMP2-209ENST00000567638 LDHBP07195 334 aaKnown RBP18.69■□□□□ 0.58
SCAMP2-209ENST00000567638 ADORA1P30542 326 aa18.69■□□□□ 0.58
SCAMP2-209ENST00000567638 DIXDC1Q155Q3 683 aa18.69■□□□□ 0.58
SCAMP2-209ENST00000567638 FRAT1Q92837 279 aaPredicted RBP18.69■□□□□ 0.58
SCAMP2-209ENST00000567638 HOOK2Q96ED9 719 aa18.69■□□□□ 0.58
SCAMP2-209ENST00000567638 SOX10P56693 466 aa18.68■□□□□ 0.58
SCAMP2-209ENST00000567638 CCDC102BQ68D86 513 aa18.68■□□□□ 0.58
SCAMP2-209ENST00000567638 FBXO46Q6PJ61 603 aaPredicted RBP18.68■□□□□ 0.58
SCAMP2-209ENST00000567638 CNKSR2Q8WXI2 1034 aa18.68■□□□□ 0.58
SCAMP2-209ENST00000567638 MS4A4AQ96JQ5 239 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms