RNA–Protein interactions for RNA: ENST00000567375.1

NSMCE1-212, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 5

Gene NSMCE1, Length 309 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-212ENST00000567375 PTPN18Q99952 460 aa10.64□□□□□ -0.71
NSMCE1-212ENST00000567375 PPP2R3BQ9Y5P8 575 aa10.64□□□□□ -0.71
NSMCE1-212ENST00000567375 CLSPNQ9HAW4 1339 aa10.63□□□□□ -0.71
NSMCE1-212ENST00000567375 WTIPA6NIX2 430 aaPredicted RBP10.63□□□□□ -0.71
NSMCE1-212ENST00000567375 IRS4O14654 1257 aaPredicted RBP10.63□□□□□ -0.71
NSMCE1-212ENST00000567375 PPP1R12BO60237 982 aaPredicted RBP10.63□□□□□ -0.71
NSMCE1-212ENST00000567375 TBC1D12O60347 775 aa10.63□□□□□ -0.71
NSMCE1-212ENST00000567375 MYCP01106 439 aaPredicted RBP10.63□□□□□ -0.71
NSMCE1-212ENST00000567375 STRIP1Q5VSL9 837 aa10.63□□□□□ -0.71
NSMCE1-212ENST00000567375 PLBD2Q8NHP8 589 aa10.63□□□□□ -0.71
NSMCE1-212ENST00000567375 SH3TC2Q8TF17 1288 aa10.63□□□□□ -0.71
NSMCE1-212ENST00000567375 ZNF428Q96B54 188 aa10.63□□□□□ -0.71
NSMCE1-212ENST00000567375 LRCH3Q96II8 777 aa10.63□□□□□ -0.71
NSMCE1-212ENST00000567375 HTATIP2Q9BUP3 242 aa10.63□□□□□ -0.71
NSMCE1-212ENST00000567375 MXD3Q9BW11 206 aa10.63□□□□□ -0.71
NSMCE1-212ENST00000567375 DEFB129Q9H1M3 183 aa10.63□□□□□ -0.71
NSMCE1-212ENST00000567375 SEC31BQ9NQW1 1179 aa10.63□□□□□ -0.71
NSMCE1-212ENST00000567375 TSPYL4Q9UJ04 414 aa10.63□□□□□ -0.71
NSMCE1-212ENST00000567375 NR2E3Q9Y5X4 410 aa10.63□□□□□ -0.71
NSMCE1-212ENST00000567375 MYH3P11055 1940 aa10.62□□□□□ -0.71
NSMCE1-212ENST00000567375 ZBTB7BO15156 539 aaPredicted RBP10.62□□□□□ -0.71
NSMCE1-212ENST00000567375 ATP2B4P23634 1241 aa10.62□□□□□ -0.71
NSMCE1-212ENST00000567375 CNGB1Q14028 1251 aaPredicted RBP10.62□□□□□ -0.71
NSMCE1-212ENST00000567375 NKX2-3Q8TAU0 364 aa10.62□□□□□ -0.71
NSMCE1-212ENST00000567375 COL25A1Q9BXS0 654 aaPredicted RBP10.62□□□□□ -0.71
NSMCE1-212ENST00000567375 ALPK3Q96L96 1907 aa10.62□□□□□ -0.71
NSMCE1-212ENST00000567375 NEFMP07197 916 aa10.61□□□□□ -0.71
NSMCE1-212ENST00000567375 PRMT2P55345 433 aa10.61□□□□□ -0.71
NSMCE1-212ENST00000567375 TAF1CQ15572 869 aaPredicted RBP10.61□□□□□ -0.71
NSMCE1-212ENST00000567375 NFE2L2Q16236 605 aa10.61□□□□□ -0.71
NSMCE1-212ENST00000567375 STXBP5LQ9Y2K9 1186 aa10.61□□□□□ -0.71
NSMCE1-212ENST00000567375 ZNF804BA4D1E1 1349 aa10.6□□□□□ -0.71
NSMCE1-212ENST00000567375 ATP5J2-PTCD1G3V325 749 aa10.6□□□□□ -0.71
NSMCE1-212ENST00000567375 GNRH1P01148 92 aa10.6□□□□□ -0.71
NSMCE1-212ENST00000567375 HSP90B1P14625 803 aaKnown RBP10.6□□□□□ -0.71
NSMCE1-212ENST00000567375 GJA8P48165 433 aa10.6□□□□□ -0.71
NSMCE1-212ENST00000567375 IREB2P48200 963 aaKnown RBP10.6□□□□□ -0.71
NSMCE1-212ENST00000567375 TRIM28Q13263 835 aaKnown RBP10.6□□□□□ -0.71
NSMCE1-212ENST00000567375 RTL5Q5HYW3 569 aaPredicted RBP10.6□□□□□ -0.71
NSMCE1-212ENST00000567375 ANKRD13AQ8IZ07 590 aa10.6□□□□□ -0.71
NSMCE1-212ENST00000567375 PLEKHF1Q96S99 279 aa10.6□□□□□ -0.71
NSMCE1-212ENST00000567375 ZFYVE28Q9HCC9 887 aa10.6□□□□□ -0.71
NSMCE1-212ENST00000567375 RYDENQ9NUL5 291 aaKnown RBP10.6□□□□□ -0.71
NSMCE1-212ENST00000567375 BABAM1Q9NWV8 329 aa10.6□□□□□ -0.71
NSMCE1-212ENST00000567375 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.6□□□□□ -0.71
NSMCE1-212ENST00000567375 ARAP2Q8WZ64 1704 aa10.6□□□□□ -0.71
NSMCE1-212ENST00000567375 VCANP13611 3396 aa10.6□□□□□ -0.71
NSMCE1-212ENST00000567375 PPP2R1AP30153 589 aa10.59□□□□□ -0.71
NSMCE1-212ENST00000567375 LACTBP83111 547 aaPredicted RBP10.59□□□□□ -0.71
NSMCE1-212ENST00000567375 MTFR1Q15390 333 aa10.59□□□□□ -0.71
NSMCE1-212ENST00000567375 SUPT20HL1Q3ZLR7 823 aa10.59□□□□□ -0.71
NSMCE1-212ENST00000567375 CCDC152Q4G0S7 254 aa10.59□□□□□ -0.71
NSMCE1-212ENST00000567375 KIAA0825Q8IV33 1275 aa10.59□□□□□ -0.71
NSMCE1-212ENST00000567375 ZBTB38Q8NAP3 1195 aaPredicted RBP10.59□□□□□ -0.71
NSMCE1-212ENST00000567375 BRI3BPQ8WY22 251 aa10.59□□□□□ -0.71
NSMCE1-212ENST00000567375 FBXW7Q969H0 707 aa10.59□□□□□ -0.71
NSMCE1-212ENST00000567375 ARHGAP39Q9C0H5 1083 aa10.59□□□□□ -0.71
NSMCE1-212ENST00000567375 COA1Q9GZY4 146 aa10.59□□□□□ -0.71
NSMCE1-212ENST00000567375 CHPF2Q9P2E5 772 aa10.59□□□□□ -0.71
NSMCE1-212ENST00000567375 GJB1P08034 283 aa10.58□□□□□ -0.72
NSMCE1-212ENST00000567375 FOSBP53539 338 aa10.58□□□□□ -0.72
NSMCE1-212ENST00000567375 ANKRD18AQ8IVF6 992 aa10.58□□□□□ -0.72
NSMCE1-212ENST00000567375 DEFB123Q8N688 67 aa10.58□□□□□ -0.72
NSMCE1-212ENST00000567375 MTMR14Q8NCE2 650 aa10.58□□□□□ -0.72
NSMCE1-212ENST00000567375 OPTNQ96CV9 577 aa10.58□□□□□ -0.72
NSMCE1-212ENST00000567375 KCNK17Q96T54 332 aa10.58□□□□□ -0.72
NSMCE1-212ENST00000567375 HCSTQ9UBK5 93 aa10.58□□□□□ -0.72
NSMCE1-212ENST00000567375 SPTBN5Q9NRC6 3674 aaKnown RBP10.57□□□□□ -0.72
NSMCE1-212ENST00000567375 CCL15-CCL14A0A0B4J2E2 113 aa10.57□□□□□ -0.72
NSMCE1-212ENST00000567375 TLR2O60603 784 aa10.57□□□□□ -0.72
NSMCE1-212ENST00000567375 USP2O75604 605 aaPredicted RBP10.57□□□□□ -0.72
NSMCE1-212ENST00000567375 MFSD10Q14728 455 aa10.57□□□□□ -0.72
NSMCE1-212ENST00000567375 KIF22Q14807 665 aa10.57□□□□□ -0.72
NSMCE1-212ENST00000567375 DLGAP5Q15398 846 aa10.57□□□□□ -0.72
NSMCE1-212ENST00000567375 CCL15Q16663 113 aa10.57□□□□□ -0.72
NSMCE1-212ENST00000567375 FAM43AQ8N2R8 423 aa10.57□□□□□ -0.72
NSMCE1-212ENST00000567375 VPS9D1Q9Y2B5 631 aa10.57□□□□□ -0.72
NSMCE1-212ENST00000567375 MGAMO43451 1857 aa10.57□□□□□ -0.72
NSMCE1-212ENST00000567375 A0A1B0GUL6 1792 aa10.57□□□□□ -0.72
NSMCE1-212ENST00000567375 TTC28Q96AY4 2481 aa10.56□□□□□ -0.72
NSMCE1-212ENST00000567375 PDE8AO60658 829 aa10.56□□□□□ -0.72
NSMCE1-212ENST00000567375 FARP2O94887 1054 aaPredicted RBP10.56□□□□□ -0.72
NSMCE1-212ENST00000567375 PDE4AP27815 886 aa10.56□□□□□ -0.72
NSMCE1-212ENST00000567375 CCT4P50991 539 aaKnown RBP10.56□□□□□ -0.72
NSMCE1-212ENST00000567375 GTF2A2P52657 109 aa10.56□□□□□ -0.72
NSMCE1-212ENST00000567375 NBPF12Q5TAG4 269 aaPredicted RBP10.56□□□□□ -0.72
NSMCE1-212ENST00000567375 TTLL5Q6EMB2 1281 aa10.56□□□□□ -0.72
NSMCE1-212ENST00000567375 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.56□□□□□ -0.72
NSMCE1-212ENST00000567375 ELP3Q9H9T3 547 aa10.56□□□□□ -0.72
NSMCE1-212ENST00000567375 ZCCHC17Q9NP64 241 aaKnown RBP10.56□□□□□ -0.72
NSMCE1-212ENST00000567375 MAPK8IP3Q9UPT6 1336 aa10.56□□□□□ -0.72
NSMCE1-212ENST00000567375 MYO1BO43795 1136 aa10.55□□□□□ -0.72
NSMCE1-212ENST00000567375 EVI5O60447 810 aa10.55□□□□□ -0.72
NSMCE1-212ENST00000567375 WDHD1O75717 1129 aaPredicted RBP10.55□□□□□ -0.72
NSMCE1-212ENST00000567375 PCCAP05165 728 aaPredicted RBP10.55□□□□□ -0.72
NSMCE1-212ENST00000567375 CCL5P13501 91 aa10.55□□□□□ -0.72
NSMCE1-212ENST00000567375 BMP8BP34820 402 aa10.55□□□□□ -0.72
NSMCE1-212ENST00000567375 TXNRD3Q86VQ6 643 aa10.55□□□□□ -0.72
NSMCE1-212ENST00000567375 ZNF454Q8N9F8 522 aa10.55□□□□□ -0.72
NSMCE1-212ENST00000567375 CDC5LQ99459 802 aaKnown RBP10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms