RNA–Protein interactions for RNA: ENST00000567023.5

COMMD4-216, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 926 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-216ENST00000567023 SREBF2Q12772 1141 aa17.79■□□□□ 0.44
COMMD4-216ENST00000567023 NBPF12Q5TAG4 269 aaPredicted RBP17.79■□□□□ 0.44
COMMD4-216ENST00000567023 SPRYD7Q5W111 196 aa17.79■□□□□ 0.44
COMMD4-216ENST00000567023 TDRD3Q9H7E2 651 aaKnown RBP17.79■□□□□ 0.44
COMMD4-216ENST00000567023 SLC5A1P13866 664 aa17.78■□□□□ 0.44
COMMD4-216ENST00000567023 CHAF1AQ13111 956 aaPredicted RBP17.78■□□□□ 0.44
COMMD4-216ENST00000567023 DGKZQ13574 1117 aa17.78■□□□□ 0.44
COMMD4-216ENST00000567023 NOM1Q5C9Z4 860 aaKnown RBP17.78■□□□□ 0.44
COMMD4-216ENST00000567023 SLC10A4Q96EP9 437 aa17.78■□□□□ 0.44
COMMD4-216ENST00000567023 CFHR5Q9BXR6 569 aa17.78■□□□□ 0.44
COMMD4-216ENST00000567023 FZD1Q9UP38 647 aa17.78■□□□□ 0.44
COMMD4-216ENST00000567023 LRRFIP2Q9Y608 721 aaKnown RBP17.78■□□□□ 0.44
COMMD4-216ENST00000567023 ZBTB22O15209 634 aa17.77■□□□□ 0.44
COMMD4-216ENST00000567023 USP2O75604 605 aaPredicted RBP17.77■□□□□ 0.44
COMMD4-216ENST00000567023 ZBTB48P10074 688 aaPredicted RBP17.77■□□□□ 0.44
COMMD4-216ENST00000567023 INHBEP58166 350 aa17.77■□□□□ 0.44
COMMD4-216ENST00000567023 TEKT1Q969V4 418 aa17.77■□□□□ 0.44
COMMD4-216ENST00000567023 ZDHHC15Q96MV8 337 aa17.77■□□□□ 0.44
COMMD4-216ENST00000567023 TEPSINQ96N21 525 aa17.77■□□□□ 0.44
COMMD4-216ENST00000567023 MEIS3Q99687 375 aa17.77■□□□□ 0.44
COMMD4-216ENST00000567023 COPRSQ9NQ92 184 aa17.77■□□□□ 0.44
COMMD4-216ENST00000567023 IPO8O15397 1037 aaKnown RBP17.76■□□□□ 0.43
COMMD4-216ENST00000567023 IL15P40933 162 aaPredicted RBP17.76■□□□□ 0.43
COMMD4-216ENST00000567023 WDR66Q8TBY9 1149 aa17.76■□□□□ 0.43
COMMD4-216ENST00000567023 CEP126Q9P2H0 1117 aa17.76■□□□□ 0.43
COMMD4-216ENST00000567023 MAST3O60307 1309 aa17.75■□□□□ 0.43
COMMD4-216ENST00000567023 MANSC4A6NHS7 340 aaPredicted RBP17.75■□□□□ 0.43
COMMD4-216ENST00000567023 CCDC85CA6NKD9 419 aa17.75■□□□□ 0.43
COMMD4-216ENST00000567023 GNAI3P08754 354 aa17.75■□□□□ 0.43
COMMD4-216ENST00000567023 IREB2P48200 963 aaKnown RBP17.75■□□□□ 0.43
COMMD4-216ENST00000567023 TNNI2P48788 182 aa17.75■□□□□ 0.43
COMMD4-216ENST00000567023 RGS19P49795 217 aa17.75■□□□□ 0.43
COMMD4-216ENST00000567023 MKRN3Q13064 507 aaKnown RBP17.75■□□□□ 0.43
COMMD4-216ENST00000567023 HHIPL2Q6UWX4 724 aa17.75■□□□□ 0.43
COMMD4-216ENST00000567023 ANKRD13AQ8IZ07 590 aa17.75■□□□□ 0.43
COMMD4-216ENST00000567023 CLMNQ96JQ2 1002 aa17.75■□□□□ 0.43
COMMD4-216ENST00000567023 SIL1Q9H173 461 aa17.75■□□□□ 0.43
COMMD4-216ENST00000567023 TBC1D8O95759 1140 aa17.74■□□□□ 0.43
COMMD4-216ENST00000567023 MTX1Q13505 466 aa17.74■□□□□ 0.43
COMMD4-216ENST00000567023 ATP2B3Q16720 1220 aa17.74■□□□□ 0.43
COMMD4-216ENST00000567023 FKBP1CQ5VVH2 108 aa17.74■□□□□ 0.43
COMMD4-216ENST00000567023 APOBEC3HQ6NTF7 200 aaKnown RBP17.74■□□□□ 0.43
COMMD4-216ENST00000567023 WNK4Q96J92 1243 aa17.74■□□□□ 0.43
COMMD4-216ENST00000567023 TCP10L2B9ZVM9 353 aa17.73■□□□□ 0.43
COMMD4-216ENST00000567023 ALDH1A1P00352 501 aa17.73■□□□□ 0.43
COMMD4-216ENST00000567023 TRIM27P14373 513 aa17.73■□□□□ 0.43
COMMD4-216ENST00000567023 ATF7IPQ6VMQ6 1270 aa17.73■□□□□ 0.43
COMMD4-216ENST00000567023 CTU1Q7Z7A3 348 aaKnown RBP17.73■□□□□ 0.43
COMMD4-216ENST00000567023 FAM83AQ86UY5 434 aa17.73■□□□□ 0.43
COMMD4-216ENST00000567023 MIER1Q8N108 512 aa17.73■□□□□ 0.43
COMMD4-216ENST00000567023 TMEM39BQ9GZU3 492 aa17.73■□□□□ 0.43
COMMD4-216ENST00000567023 PA2G4Q9UQ80 394 aaKnown RBP17.73■□□□□ 0.43
COMMD4-216ENST00000567023 LAMB1P07942 1786 aa17.73■□□□□ 0.43
COMMD4-216ENST00000567023 GPR25O00155 361 aa17.72■□□□□ 0.43
COMMD4-216ENST00000567023 BCAR3O75815 825 aa17.72■□□□□ 0.43
COMMD4-216ENST00000567023 IFNL1Q8IU54 200 aa17.72■□□□□ 0.43
COMMD4-216ENST00000567023 CDAN1Q8IWY9 1227 aa17.72■□□□□ 0.43
COMMD4-216ENST00000567023 ZNF296Q8WUU4 475 aaPredicted RBP17.72■□□□□ 0.43
COMMD4-216ENST00000567023 GNL3LQ9NVN8 582 aaKnown RBP17.72■□□□□ 0.43
COMMD4-216ENST00000567023 SEMA3EO15041 775 aa17.71■□□□□ 0.43
COMMD4-216ENST00000567023 PKN2Q16513 984 aaKnown RBP17.71■□□□□ 0.43
COMMD4-216ENST00000567023 SALL1Q9NSC2 1324 aa17.71■□□□□ 0.42
COMMD4-216ENST00000567023 TESPA1A2RU30 521 aaPredicted RBP17.7■□□□□ 0.42
COMMD4-216ENST00000567023 SRGAP3O43295 1099 aa17.7■□□□□ 0.42
COMMD4-216ENST00000567023 GJA5P36382 358 aa17.7■□□□□ 0.42
COMMD4-216ENST00000567023 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.7■□□□□ 0.42
COMMD4-216ENST00000567023 DENND2AQ9ULE3 1009 aa17.7■□□□□ 0.42
COMMD4-216ENST00000567023 MYH13Q9UKX3 1938 aa17.69■□□□□ 0.42
COMMD4-216ENST00000567023 PHKA1P46020 1223 aa17.69■□□□□ 0.42
COMMD4-216ENST00000567023 CACNB3P54284 484 aa17.69■□□□□ 0.42
COMMD4-216ENST00000567023 MAP3K9P80192 1104 aa17.69■□□□□ 0.42
COMMD4-216ENST00000567023 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.69■□□□□ 0.42
COMMD4-216ENST00000567023 R3HDMLQ9H3Y0 253 aa17.69■□□□□ 0.42
COMMD4-216ENST00000567023 TMOD2Q9NZR1 351 aa17.69■□□□□ 0.42
COMMD4-216ENST00000567023 IGF2BP3O00425 579 aaKnown RBP eCLIP17.68■□□□□ 0.42
COMMD4-216ENST00000567023 GNAI2P04899 355 aa17.68■□□□□ 0.42
COMMD4-216ENST00000567023 PRDX5P30044 214 aa17.68■□□□□ 0.42
COMMD4-216ENST00000567023 TIMM10P62072 90 aa17.68■□□□□ 0.42
COMMD4-216ENST00000567023 CCDC102BQ68D86 513 aa17.68■□□□□ 0.42
COMMD4-216ENST00000567023 FRAT1Q92837 279 aaPredicted RBP17.68■□□□□ 0.42
COMMD4-216ENST00000567023 OPTNQ96CV9 577 aa17.68■□□□□ 0.42
COMMD4-216ENST00000567023 HOOK2Q96ED9 719 aa17.68■□□□□ 0.42
COMMD4-216ENST00000567023 AKAP2Q9Y2D5 859 aa17.68■□□□□ 0.42
COMMD4-216ENST00000567023 RPAP1Q9BWH6 1393 aaPredicted RBP17.67■□□□□ 0.42
COMMD4-216ENST00000567023 FKTNO75072 461 aa17.67■□□□□ 0.42
COMMD4-216ENST00000567023 LDHBP07195 334 aaKnown RBP17.67■□□□□ 0.42
COMMD4-216ENST00000567023 ADORA1P30542 326 aa17.67■□□□□ 0.42
COMMD4-216ENST00000567023 HNRNPUQ00839 825 aaKnown RBP eCLIP17.67■□□□□ 0.42
COMMD4-216ENST00000567023 VGLL4Q14135 290 aa17.67■□□□□ 0.42
COMMD4-216ENST00000567023 OTUD7BQ6GQQ9 843 aa17.67■□□□□ 0.42
COMMD4-216ENST00000567023 MS4A4AQ96JQ5 239 aa17.67■□□□□ 0.42
COMMD4-216ENST00000567023 ELP3Q9H9T3 547 aa17.67■□□□□ 0.42
COMMD4-216ENST00000567023 TNNQ9UQP3 1299 aa17.67■□□□□ 0.42
COMMD4-216ENST00000567023 DAGLAQ9Y4D2 1042 aa17.67■□□□□ 0.42
COMMD4-216ENST00000567023 OTOFQ9HC10 1997 aa17.67■□□□□ 0.42
COMMD4-216ENST00000567023 PDS5AQ29RF7 1337 aaKnown RBP17.67■□□□□ 0.42
COMMD4-216ENST00000567023 ZKSCAN2Q63HK3 967 aa17.66■□□□□ 0.42
COMMD4-216ENST00000567023 ZGPATQ8N5A5 531 aaKnown RBP17.66■□□□□ 0.42
COMMD4-216ENST00000567023 FAM151AQ8WW52 585 aa17.66■□□□□ 0.42
COMMD4-216ENST00000567023 PTPN18Q99952 460 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms