RNA–Protein interactions for RNA: ENST00000567003.1

PALB2-205, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 789 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-205ENST00000567003 TMEM39BQ9GZU3 492 aa19.65■□□□□ 0.74
PALB2-205ENST00000567003 SPINK5Q9NQ38 1064 aaPredicted RBP19.65■□□□□ 0.74
PALB2-205ENST00000567003 ZSWIM8A7E2V4 1837 aa19.65■□□□□ 0.74
PALB2-205ENST00000567003 TESPA1A2RU30 521 aaPredicted RBP19.64■□□□□ 0.73
PALB2-205ENST00000567003 UNCXA6NJT0 531 aa19.64■□□□□ 0.73
PALB2-205ENST00000567003 SP3Q02447 781 aa19.64■□□□□ 0.73
PALB2-205ENST00000567003 INTS3Q68E01 1043 aaKnown RBP19.64■□□□□ 0.73
PALB2-205ENST00000567003 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.64■□□□□ 0.73
PALB2-205ENST00000567003 BRI3BPQ8WY22 251 aa19.64■□□□□ 0.73
PALB2-205ENST00000567003 MS4A4AQ96JQ5 239 aa19.64■□□□□ 0.73
PALB2-205ENST00000567003 IQSEC3Q9UPP2 1182 aaPredicted RBP19.64■□□□□ 0.73
PALB2-205ENST00000567003 HIBADHP31937 336 aaKnown RBP19.63■□□□□ 0.73
PALB2-205ENST00000567003 DZIP1LQ8IYY4 767 aaKnown RBP19.63■□□□□ 0.73
PALB2-205ENST00000567003 ARMC5Q96C12 935 aa19.63■□□□□ 0.73
PALB2-205ENST00000567003 FAM84BQ96KN1 310 aaPredicted RBP19.63■□□□□ 0.73
PALB2-205ENST00000567003 CRKP46108 304 aa19.62■□□□□ 0.73
PALB2-205ENST00000567003 TNFAIP1Q13829 316 aa19.62■□□□□ 0.73
PALB2-205ENST00000567003 VGLL4Q14135 290 aa19.62■□□□□ 0.73
PALB2-205ENST00000567003 HABP4Q5JVS0 413 aaKnown RBP19.62■□□□□ 0.73
PALB2-205ENST00000567003 SLC4A10Q6U841 1118 aa19.62■□□□□ 0.73
PALB2-205ENST00000567003 SUCLG2Q96I99 432 aa19.62■□□□□ 0.73
PALB2-205ENST00000567003 C9orf78Q9NZ63 289 aaPredicted RBP19.62■□□□□ 0.73
PALB2-205ENST00000567003 SERPINA10Q9UK55 444 aa19.62■□□□□ 0.73
PALB2-205ENST00000567003 CCL15-CCL14A0A0B4J2E2 113 aa19.61■□□□□ 0.73
PALB2-205ENST00000567003 CACNB3P54284 484 aa19.61■□□□□ 0.73
PALB2-205ENST00000567003 CHAF1AQ13111 956 aaPredicted RBP19.61■□□□□ 0.73
PALB2-205ENST00000567003 UBE4AQ14139 1066 aa19.61■□□□□ 0.73
PALB2-205ENST00000567003 CCL15Q16663 113 aa19.61■□□□□ 0.73
PALB2-205ENST00000567003 GCC1Q96CN9 775 aa19.61■□□□□ 0.73
PALB2-205ENST00000567003 KAZALD1Q96I82 304 aa19.61■□□□□ 0.73
PALB2-205ENST00000567003 MYCP01106 439 aaPredicted RBP19.6■□□□□ 0.73
PALB2-205ENST00000567003 TAF1CQ15572 869 aaPredicted RBP19.6■□□□□ 0.73
PALB2-205ENST00000567003 WDR63Q8IWG1 891 aa19.6■□□□□ 0.73
PALB2-205ENST00000567003 FAM43AQ8N2R8 423 aa19.6■□□□□ 0.73
PALB2-205ENST00000567003 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.6■□□□□ 0.73
PALB2-205ENST00000567003 OTUD5Q96G74 571 aa19.6■□□□□ 0.73
PALB2-205ENST00000567003 MRS2Q9HD23 443 aa19.6■□□□□ 0.73
PALB2-205ENST00000567003 PTCH2Q9Y6C5 1203 aa19.6■□□□□ 0.73
PALB2-205ENST00000567003 CEP290O15078 2479 aa19.59■□□□□ 0.73
PALB2-205ENST00000567003 MAP3K9P80192 1104 aa19.59■□□□□ 0.73
PALB2-205ENST00000567003 ZNF333Q96JL9 665 aa19.58■□□□□ 0.72
PALB2-205ENST00000567003 ARHGAP39Q9C0H5 1083 aa19.58■□□□□ 0.72
PALB2-205ENST00000567003 ZFYVE28Q9HCC9 887 aa19.58■□□□□ 0.72
PALB2-205ENST00000567003 ALDH1L1O75891 902 aa19.57■□□□□ 0.72
PALB2-205ENST00000567003 ECM2O94769 699 aaPredicted RBP19.57■□□□□ 0.72
PALB2-205ENST00000567003 NBPF7P0C2Y1 421 aaPredicted RBP19.57■□□□□ 0.72
PALB2-205ENST00000567003 GTF2A2P52657 109 aa19.57■□□□□ 0.72
PALB2-205ENST00000567003 LRRC24Q50LG9 513 aa19.57■□□□□ 0.72
PALB2-205ENST00000567003 SRCIN1Q9C0H9 1055 aa19.57■□□□□ 0.72
PALB2-205ENST00000567003 RIPOR2Q9Y4F9 1068 aa19.57■□□□□ 0.72
PALB2-205ENST00000567003 CSADQ9Y600 493 aa19.57■□□□□ 0.72
PALB2-205ENST00000567003 TNNI2P48788 182 aa19.56■□□□□ 0.72
PALB2-205ENST00000567003 SLC9C1Q4G0N8 1177 aa19.56■□□□□ 0.72
PALB2-205ENST00000567003 FBXO33Q7Z6M2 555 aa19.56■□□□□ 0.72
PALB2-205ENST00000567003 VPS37DQ86XT2 251 aa19.56■□□□□ 0.72
PALB2-205ENST00000567003 BICC1Q9H694 974 aaKnown RBP19.56■□□□□ 0.72
PALB2-205ENST00000567003 SNCAIPQ9Y6H5 919 aa19.56■□□□□ 0.72
PALB2-205ENST00000567003 ZKSCAN4Q969J2 545 aaPredicted RBP19.55■□□□□ 0.72
PALB2-205ENST00000567003 TMEM106CQ9BVX2 250 aa19.55■□□□□ 0.72
PALB2-205ENST00000567003 MROH5Q6ZUA9 1318 aa19.54■□□□□ 0.72
PALB2-205ENST00000567003 SPDYE5A6NIY4 337 aa19.54■□□□□ 0.72
PALB2-205ENST00000567003 METTL24Q5JXM2 366 aa19.54■□□□□ 0.72
PALB2-205ENST00000567003 KLHDC4Q8TBB5 520 aa19.54■□□□□ 0.72
PALB2-205ENST00000567003 SH3TC2Q8TF17 1288 aa19.54■□□□□ 0.72
PALB2-205ENST00000567003 WRNIP1Q96S55 665 aa19.54■□□□□ 0.72
PALB2-205ENST00000567003 BTBD19C9JJ37 291 aa19.53■□□□□ 0.72
PALB2-205ENST00000567003 FRAT2O75474 233 aaPredicted RBP19.53■□□□□ 0.72
PALB2-205ENST00000567003 BCAMP50895 628 aa19.53■□□□□ 0.72
PALB2-205ENST00000567003 SLC4A8Q2Y0W8 1093 aa19.53■□□□□ 0.72
PALB2-205ENST00000567003 ANKRD44Q8N8A2 993 aa19.53■□□□□ 0.72
PALB2-205ENST00000567003 TEKT1Q969V4 418 aa19.53■□□□□ 0.72
PALB2-205ENST00000567003 VGLL2Q8N8G2 317 aa19.52■□□□□ 0.72
PALB2-205ENST00000567003 TRIOBPQ9H2D6 2365 aa19.52■□□□□ 0.72
PALB2-205ENST00000567003 IRF6O14896 467 aa19.51■□□□□ 0.71
PALB2-205ENST00000567003 APOBEC3HQ6NTF7 200 aaKnown RBP19.51■□□□□ 0.71
PALB2-205ENST00000567003 UTYO14607 1347 aa19.51■□□□□ 0.71
PALB2-205ENST00000567003 TLR2O60603 784 aa19.5■□□□□ 0.71
PALB2-205ENST00000567003 CETPP11597 493 aa19.5■□□□□ 0.71
PALB2-205ENST00000567003 FXR1P51114 621 aaKnown RBP eCLIP19.5■□□□□ 0.71
PALB2-205ENST00000567003 LACTBP83111 547 aaPredicted RBP19.5■□□□□ 0.71
PALB2-205ENST00000567003 HDLBPQ00341 1268 aaKnown RBP19.5■□□□□ 0.71
PALB2-205ENST00000567003 RABL6Q3YEC7 729 aaPredicted RBP19.5■□□□□ 0.71
PALB2-205ENST00000567003 CAVIN4Q5BKX8 364 aa19.5■□□□□ 0.71
PALB2-205ENST00000567003 MIGA2Q7L4E1 593 aa19.5■□□□□ 0.71
PALB2-205ENST00000567003 NBPF11Q86T75 865 aa19.5■□□□□ 0.71
PALB2-205ENST00000567003 ERO1BQ86YB8 467 aa19.5■□□□□ 0.71
PALB2-205ENST00000567003 TBC1D22AQ8WUA7 517 aa19.5■□□□□ 0.71
PALB2-205ENST00000567003 ZDHHC15Q96MV8 337 aa19.5■□□□□ 0.71
PALB2-205ENST00000567003 TMOD2Q9NZR1 351 aa19.5■□□□□ 0.71
PALB2-205ENST00000567003 MYH13Q9UKX3 1938 aa19.5■□□□□ 0.71
PALB2-205ENST00000567003 SZT2Q5T011 3432 aa19.49■□□□□ 0.71
PALB2-205ENST00000567003 CTGFP29279 349 aa19.49■□□□□ 0.71
PALB2-205ENST00000567003 PPIL2Q13356 520 aa19.49■□□□□ 0.71
PALB2-205ENST00000567003 ARHGEF6Q15052 776 aa19.49■□□□□ 0.71
PALB2-205ENST00000567003 COLQQ9Y215 455 aaPredicted RBP19.49■□□□□ 0.71
PALB2-205ENST00000567003 PDE8BO95263 885 aa19.48■□□□□ 0.71
PALB2-205ENST00000567003 INPP5BP32019 993 aa19.48■□□□□ 0.71
PALB2-205ENST00000567003 SNAPC2Q13487 334 aa19.48■□□□□ 0.71
PALB2-205ENST00000567003 FAM83AQ86UY5 434 aa19.48■□□□□ 0.71
PALB2-205ENST00000567003 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms