RNA–Protein interactions for RNA: ENST00000566549.5

MSLN-207, Transcript of mesothelin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSLN, Length 2,418 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-207ENST00000566549 B4E1Z4 1266 aa21.92■■□□□ 1.1
MSLN-207ENST00000566549 DDX19AQ9NUU7 478 aaKnown RBP21.92■■□□□ 1.1
MSLN-207ENST00000566549 ATRNO75882 1429 aa21.92■■□□□ 1.1
MSLN-207ENST00000566549 LRP5O75197 1615 aa21.92■■□□□ 1.1
MSLN-207ENST00000566549 NRAPQ86VF7 1730 aa21.92■■□□□ 1.1
MSLN-207ENST00000566549 KDM4AO75164 1064 aa21.92■■□□□ 1.1
MSLN-207ENST00000566549 CLSTN2Q9H4D0 955 aa21.92■■□□□ 1.1
MSLN-207ENST00000566549 MRVI1Q9Y6F6 885 aa21.92■■□□□ 1.1
MSLN-207ENST00000566549 CHRNDQ07001 517 aa21.91■■□□□ 1.1
MSLN-207ENST00000566549 MAP3K12Q12852 859 aa21.91■■□□□ 1.1
MSLN-207ENST00000566549 ZNF830Q96NB3 372 aaPredicted RBP21.91■■□□□ 1.1
MSLN-207ENST00000566549 SENP2Q9HC62 589 aa21.91■■□□□ 1.1
MSLN-207ENST00000566549 ORC3Q9UBD5 711 aaPredicted RBP21.91■■□□□ 1.1
MSLN-207ENST00000566549 NEDD4P46934 1319 aa21.91■■□□□ 1.1
MSLN-207ENST00000566549 WTIPA6NIX2 430 aaPredicted RBP21.91■■□□□ 1.1
MSLN-207ENST00000566549 AP5Z1O43299 807 aa21.91■■□□□ 1.1
MSLN-207ENST00000566549 C3orf67Q6ZVT6 689 aa21.91■■□□□ 1.1
MSLN-207ENST00000566549 PTF1AQ7RTS3 328 aa21.91■■□□□ 1.1
MSLN-207ENST00000566549 CCDC144CPQ8IYA2 1237 aa21.91■■□□□ 1.1
MSLN-207ENST00000566549 STK11IPQ8N1F8 1099 aa21.91■■□□□ 1.1
MSLN-207ENST00000566549 LINC00116Q8NCU8 138 aa21.91■■□□□ 1.1
MSLN-207ENST00000566549 EPB41L4AQ9HCS5 686 aaPredicted RBP21.91■■□□□ 1.1
MSLN-207ENST00000566549 CTDSPL2Q05D32 466 aa21.9■■□□□ 1.1
MSLN-207ENST00000566549 BARGINQ6ZT62 677 aa21.9■■□□□ 1.1
MSLN-207ENST00000566549 C8orf76Q96K31 380 aa21.9■■□□□ 1.1
MSLN-207ENST00000566549 PRKAB2O43741 272 aa21.9■■□□□ 1.1
MSLN-207ENST00000566549 POLR3DP05423 398 aaPredicted RBP21.9■■□□□ 1.1
MSLN-207ENST00000566549 ERFEQ4G0M1 354 aa21.9■■□□□ 1.1
MSLN-207ENST00000566549 C8orf37Q96NL8 207 aa21.9■■□□□ 1.1
MSLN-207ENST00000566549 MYO5AQ9Y4I1 1855 aaKnown RBP21.9■■□□□ 1.1
MSLN-207ENST00000566549 MYH14Q7Z406 1995 aaKnown RBP21.9■■□□□ 1.1
MSLN-207ENST00000566549 DHX16O60231 1041 aaKnown RBP21.89■■□□□ 1.1
MSLN-207ENST00000566549 MIGA1Q8NAN2 632 aa21.89■■□□□ 1.1
MSLN-207ENST00000566549 NAPBQ9H115 298 aa21.89■■□□□ 1.1
MSLN-207ENST00000566549 ANGEL1Q9UNK9 670 aaKnown RBP21.89■■□□□ 1.1
MSLN-207ENST00000566549 ZNF652Q9Y2D9 606 aa21.89■■□□□ 1.1
MSLN-207ENST00000566549 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP21.89■■□□□ 1.1
MSLN-207ENST00000566549 ANO6Q4KMQ2 910 aa21.89■■□□□ 1.09
MSLN-207ENST00000566549 LUZP1Q86V48 1076 aa21.89■■□□□ 1.09
MSLN-207ENST00000566549 CCAR1Q8IX12 1150 aaKnown RBP21.89■■□□□ 1.09
MSLN-207ENST00000566549 IFNL3Q8IZI9 196 aa21.89■■□□□ 1.09
MSLN-207ENST00000566549 SMARCC1Q92922 1105 aaPredicted RBP21.89■■□□□ 1.09
MSLN-207ENST00000566549 ZNF396Q96N95 335 aaPredicted RBP21.89■■□□□ 1.09
MSLN-207ENST00000566549 GOLPH3LQ9H4A5 285 aa21.89■■□□□ 1.09
MSLN-207ENST00000566549 MYH7P12883 1935 aa21.89■■□□□ 1.09
MSLN-207ENST00000566549 LTBP4Q8N2S1 1624 aa21.88■■□□□ 1.09
MSLN-207ENST00000566549 ME1P48163 572 aa21.88■■□□□ 1.09
MSLN-207ENST00000566549 MICU3Q86XE3 530 aa21.88■■□□□ 1.09
MSLN-207ENST00000566549 CHMP4CQ96CF2 233 aa21.88■■□□□ 1.09
MSLN-207ENST00000566549 MYL10Q9BUA6 226 aa21.88■■□□□ 1.09
MSLN-207ENST00000566549 RCOR1Q9UKL0 485 aa21.88■■□□□ 1.09
MSLN-207ENST00000566549 LCORLQ8N3X6 602 aa21.88■■□□□ 1.09
MSLN-207ENST00000566549 FAM200AQ8TCP9 573 aa21.88■■□□□ 1.09
MSLN-207ENST00000566549 SH2B2O14492 632 aaPredicted RBP21.87■■□□□ 1.09
MSLN-207ENST00000566549 METAP2P50579 478 aaKnown RBP eCLIP21.87■■□□□ 1.09
MSLN-207ENST00000566549 LRP2BPQ9P2M1 347 aa21.87■■□□□ 1.09
MSLN-207ENST00000566549 COL4A1P02462 1669 aa21.87■■□□□ 1.09
MSLN-207ENST00000566549 PATL2C9JE40 543 aaKnown RBP21.87■■□□□ 1.09
MSLN-207ENST00000566549 NFXL1Q6ZNB6 911 aa21.87■■□□□ 1.09
MSLN-207ENST00000566549 AIFM3Q96NN9 605 aa21.87■■□□□ 1.09
MSLN-207ENST00000566549 TOMM22Q9NS69 142 aa21.86■■□□□ 1.09
MSLN-207ENST00000566549 ABCF2Q9UG63 623 aa21.86■■□□□ 1.09
MSLN-207ENST00000566549 ZNF500O60304 480 aaPredicted RBP21.86■■□□□ 1.09
MSLN-207ENST00000566549 GTF2E1P29083 439 aaPredicted RBP21.86■■□□□ 1.09
MSLN-207ENST00000566549 GYG1P46976 350 aa21.86■■□□□ 1.09
MSLN-207ENST00000566549 RRP12Q5JTH9 1297 aaKnown RBP21.86■■□□□ 1.09
MSLN-207ENST00000566549 SASS6Q6UVJ0 657 aa21.86■■□□□ 1.09
MSLN-207ENST00000566549 PHKBQ93100 1093 aa21.86■■□□□ 1.09
MSLN-207ENST00000566549 NGLY1Q96IV0 654 aa21.86■■□□□ 1.09
MSLN-207ENST00000566549 TTC12Q9H892 705 aaPredicted RBP21.86■■□□□ 1.09
MSLN-207ENST00000566549 TACC3Q9Y6A5 838 aa21.86■■□□□ 1.09
MSLN-207ENST00000566549 WDR19Q8NEZ3 1342 aa21.85■■□□□ 1.09
MSLN-207ENST00000566549 TDO2P48775 406 aa21.85■■□□□ 1.09
MSLN-207ENST00000566549 FBXO18Q8NFZ0 1043 aa21.85■■□□□ 1.09
MSLN-207ENST00000566549 SLC4A4Q9Y6R1 1079 aa21.85■■□□□ 1.09
MSLN-207ENST00000566549 GSG1L2A8MUP6 293 aa21.85■■□□□ 1.09
MSLN-207ENST00000566549 CDC27P30260 824 aa21.85■■□□□ 1.09
MSLN-207ENST00000566549 FAM182BQ5T319 152 aa21.85■■□□□ 1.09
MSLN-207ENST00000566549 APOA5Q6Q788 366 aa21.85■■□□□ 1.09
MSLN-207ENST00000566549 CDC5LQ99459 802 aaKnown RBP21.85■■□□□ 1.09
MSLN-207ENST00000566549 DNAJC25Q9H1X3 360 aa21.85■■□□□ 1.09
MSLN-207ENST00000566549 CBX8Q9HC52 389 aa21.85■■□□□ 1.09
MSLN-207ENST00000566549 KIF28PB7ZC32 967 aa21.84■■□□□ 1.09
MSLN-207ENST00000566549 TMEM67Q5HYA8 995 aa21.84■■□□□ 1.09
MSLN-207ENST00000566549 RBM43Q6ZSC3 357 aaKnown RBP21.84■■□□□ 1.09
MSLN-207ENST00000566549 CCDC24Q8N4L8 307 aa21.84■■□□□ 1.09
MSLN-207ENST00000566549 SPC24Q8NBT2 197 aa21.84■■□□□ 1.09
MSLN-207ENST00000566549 CLIC4Q9Y696 253 aa21.84■■□□□ 1.09
MSLN-207ENST00000566549 DDX60Q8IY21 1712 aaKnown RBP21.84■■□□□ 1.09
MSLN-207ENST00000566549 ZMYM6O95789 1325 aa21.84■■□□□ 1.09
MSLN-207ENST00000566549 CCDC73Q6ZRK6 1079 aa21.84■■□□□ 1.09
MSLN-207ENST00000566549 ANKRD18AQ8IVF6 992 aa21.84■■□□□ 1.09
MSLN-207ENST00000566549 A0A087WWV3 80 aa21.83■■□□□ 1.09
MSLN-207ENST00000566549 FSIP1Q8NA03 581 aa21.83■■□□□ 1.09
MSLN-207ENST00000566549 ZKSCAN3Q9BRR0 538 aa21.83■■□□□ 1.09
MSLN-207ENST00000566549 ZSWIM5Q9P217 1185 aa21.83■■□□□ 1.09
MSLN-207ENST00000566549 PCDHA7Q9UN72 937 aa21.83■■□□□ 1.09
MSLN-207ENST00000566549 OFD1O75665 1012 aa21.82■■□□□ 1.08
MSLN-207ENST00000566549 TBC1D9BQ66K14 1250 aa21.82■■□□□ 1.08
MSLN-207ENST00000566549 ADGRA1Q86SQ6 560 aa21.82■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms