RNA–Protein interactions for RNA: ENST00000566347.5

CLN6-207, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best) BASIC

Gene CLN6, Length 981 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-207ENST00000566347 LRRFIP2Q9Y608 721 aaKnown RBP25.16■■□□□ 1.62
CLN6-207ENST00000566347 INTS3Q68E01 1043 aaKnown RBP25.15■■□□□ 1.62
CLN6-207ENST00000566347 TDRD3Q9H7E2 651 aaKnown RBP25.15■■□□□ 1.62
CLN6-207ENST00000566347 MAST3O60307 1309 aa25.14■■□□□ 1.62
CLN6-207ENST00000566347 IPO8O15397 1037 aaKnown RBP25.14■■□□□ 1.62
CLN6-207ENST00000566347 IREB2P48200 963 aaKnown RBP25.14■■□□□ 1.62
CLN6-207ENST00000566347 MKRN3Q13064 507 aaKnown RBP25.14■■□□□ 1.62
CLN6-207ENST00000566347 NBPF12Q5TAG4 269 aaPredicted RBP25.14■■□□□ 1.62
CLN6-207ENST00000566347 SPRYD7Q5W111 196 aa25.14■■□□□ 1.62
CLN6-207ENST00000566347 TEKT1Q969V4 418 aa25.14■■□□□ 1.62
CLN6-207ENST00000566347 SLC10A4Q96EP9 437 aa25.14■■□□□ 1.62
CLN6-207ENST00000566347 MEIS3Q99687 375 aa25.14■■□□□ 1.62
CLN6-207ENST00000566347 MRIQ9BWK5 157 aa25.14■■□□□ 1.62
CLN6-207ENST00000566347 SIL1Q9H173 461 aa25.14■■□□□ 1.62
CLN6-207ENST00000566347 CEP126Q9P2H0 1117 aa25.14■■□□□ 1.62
CLN6-207ENST00000566347 FZD1Q9UP38 647 aa25.14■■□□□ 1.62
CLN6-207ENST00000566347 GNAI3P08754 354 aa25.13■■□□□ 1.61
CLN6-207ENST00000566347 TNNI2P48788 182 aa25.13■■□□□ 1.61
CLN6-207ENST00000566347 GRIK5Q16478 980 aa25.13■■□□□ 1.61
CLN6-207ENST00000566347 MYH13Q9UKX3 1938 aa25.13■■□□□ 1.61
CLN6-207ENST00000566347 CCDC85CA6NKD9 419 aa25.12■■□□□ 1.61
CLN6-207ENST00000566347 IL15P40933 162 aaPredicted RBP25.12■■□□□ 1.61
CLN6-207ENST00000566347 ATP2B3Q16720 1220 aa25.12■■□□□ 1.61
CLN6-207ENST00000566347 WDR66Q8TBY9 1149 aa25.12■■□□□ 1.61
CLN6-207ENST00000566347 ZBTB48P10074 688 aaPredicted RBP25.11■■□□□ 1.61
CLN6-207ENST00000566347 COPRSQ9NQ92 184 aa25.11■■□□□ 1.61
CLN6-207ENST00000566347 ZDHHC15Q96MV8 337 aa25.1■■□□□ 1.61
CLN6-207ENST00000566347 GNL3LQ9NVN8 582 aaKnown RBP25.1■■□□□ 1.61
CLN6-207ENST00000566347 MANSC4A6NHS7 340 aaPredicted RBP25.09■■□□□ 1.61
CLN6-207ENST00000566347 TCP10L2B9ZVM9 353 aa25.09■■□□□ 1.61
CLN6-207ENST00000566347 USP2O75604 605 aaPredicted RBP25.09■■□□□ 1.61
CLN6-207ENST00000566347 INHBEP58166 350 aa25.09■■□□□ 1.61
CLN6-207ENST00000566347 ATF7IPQ6VMQ6 1270 aa25.09■■□□□ 1.61
CLN6-207ENST00000566347 ANKRD13AQ8IZ07 590 aa25.09■■□□□ 1.61
CLN6-207ENST00000566347 WNK4Q96J92 1243 aa25.09■■□□□ 1.61
CLN6-207ENST00000566347 CLMNQ96JQ2 1002 aa25.09■■□□□ 1.61
CLN6-207ENST00000566347 TMOD2Q9NZR1 351 aa25.09■■□□□ 1.61
CLN6-207ENST00000566347 TRIM27P14373 513 aa25.08■■□□□ 1.61
CLN6-207ENST00000566347 NOM1Q5C9Z4 860 aaKnown RBP25.08■■□□□ 1.61
CLN6-207ENST00000566347 DIEXFQ68CQ4 756 aaKnown RBP25.08■■□□□ 1.61
CLN6-207ENST00000566347 HHIPL2Q6UWX4 724 aa25.08■■□□□ 1.61
CLN6-207ENST00000566347 TEPSINQ96N21 525 aa25.08■■□□□ 1.61
CLN6-207ENST00000566347 PA2G4Q9UQ80 394 aaKnown RBP25.08■■□□□ 1.61
CLN6-207ENST00000566347 TBC1D8O95759 1140 aa25.07■■□□□ 1.6
CLN6-207ENST00000566347 ALDH1A1P00352 501 aa25.07■■□□□ 1.6
CLN6-207ENST00000566347 CTU1Q7Z7A3 348 aaKnown RBP25.07■■□□□ 1.6
CLN6-207ENST00000566347 MIER1Q8N108 512 aa25.07■■□□□ 1.6
CLN6-207ENST00000566347 FRAT1Q92837 279 aaPredicted RBP25.07■■□□□ 1.6
CLN6-207ENST00000566347 CFHR5Q9BXR6 569 aa25.07■■□□□ 1.6
CLN6-207ENST00000566347 TMEM39BQ9GZU3 492 aa25.07■■□□□ 1.6
CLN6-207ENST00000566347 LAMB1P07942 1786 aa25.06■■□□□ 1.6
CLN6-207ENST00000566347 BCAR3O75815 825 aa25.06■■□□□ 1.6
CLN6-207ENST00000566347 MTX1Q13505 466 aa25.06■■□□□ 1.6
CLN6-207ENST00000566347 FKBP1CQ5VVH2 108 aa25.06■■□□□ 1.6
CLN6-207ENST00000566347 ZBTB4Q9P1Z0 1013 aaPredicted RBP25.06■■□□□ 1.6
CLN6-207ENST00000566347 SEMA3EO15041 775 aa25.05■■□□□ 1.6
CLN6-207ENST00000566347 SRGAP3O43295 1099 aa25.05■■□□□ 1.6
CLN6-207ENST00000566347 HNRNPUQ00839 825 aaKnown RBP eCLIP25.05■■□□□ 1.6
CLN6-207ENST00000566347 APOBEC3HQ6NTF7 200 aaKnown RBP25.05■■□□□ 1.6
CLN6-207ENST00000566347 FAM83AQ86UY5 434 aa25.05■■□□□ 1.6
CLN6-207ENST00000566347 ZBTB22O15209 634 aa25.04■■□□□ 1.6
CLN6-207ENST00000566347 ZNF296Q8WUU4 475 aaPredicted RBP25.04■■□□□ 1.6
CLN6-207ENST00000566347 DENND2AQ9ULE3 1009 aa25.04■■□□□ 1.6
CLN6-207ENST00000566347 OTOFQ9HC10 1997 aa25.04■■□□□ 1.6
CLN6-207ENST00000566347 GPR25O00155 361 aa25.03■■□□□ 1.6
CLN6-207ENST00000566347 IFNL1Q8IU54 200 aa25.03■■□□□ 1.6
CLN6-207ENST00000566347 CDAN1Q8IWY9 1227 aa25.03■■□□□ 1.6
CLN6-207ENST00000566347 HOOK2Q96ED9 719 aa25.03■■□□□ 1.6
CLN6-207ENST00000566347 GNAI2P04899 355 aa25.02■■□□□ 1.6
CLN6-207ENST00000566347 CACNB3P54284 484 aa25.02■■□□□ 1.6
CLN6-207ENST00000566347 AKAP2Q9Y2D5 859 aa25.02■■□□□ 1.6
CLN6-207ENST00000566347 SALL1Q9NSC2 1324 aa25.02■■□□□ 1.6
CLN6-207ENST00000566347 LDHBP07195 334 aaKnown RBP25.01■■□□□ 1.59
CLN6-207ENST00000566347 PHKA1P46020 1223 aa25.01■■□□□ 1.59
CLN6-207ENST00000566347 PKN2Q16513 984 aaKnown RBP25.01■■□□□ 1.59
CLN6-207ENST00000566347 ZKSCAN2Q63HK3 967 aa25.01■■□□□ 1.59
CLN6-207ENST00000566347 CLUAP1Q96AJ1 413 aa25.01■■□□□ 1.59
CLN6-207ENST00000566347 ELP3Q9H9T3 547 aa25.01■■□□□ 1.59
CLN6-207ENST00000566347 GJA5P36382 358 aa25■■□□□ 1.59
CLN6-207ENST00000566347 MAP3K9P80192 1104 aa25■■□□□ 1.59
CLN6-207ENST00000566347 CCDC102BQ68D86 513 aa25■■□□□ 1.59
CLN6-207ENST00000566347 OTUD7BQ6GQQ9 843 aa25■■□□□ 1.59
CLN6-207ENST00000566347 ZGPATQ8N5A5 531 aaKnown RBP25■■□□□ 1.59
CLN6-207ENST00000566347 TNNQ9UQP3 1299 aa25■■□□□ 1.59
CLN6-207ENST00000566347 CSADQ9Y600 493 aa25■■□□□ 1.59
CLN6-207ENST00000566347 RPAP1Q9BWH6 1393 aaPredicted RBP25■■□□□ 1.59
CLN6-207ENST00000566347 PRDX5P30044 214 aa24.99■■□□□ 1.59
CLN6-207ENST00000566347 ADORA1P30542 326 aa24.99■■□□□ 1.59
CLN6-207ENST00000566347 RGS19P49795 217 aa24.99■■□□□ 1.59
CLN6-207ENST00000566347 PPP1R3FQ6ZSY5 799 aaPredicted RBP24.99■■□□□ 1.59
CLN6-207ENST00000566347 DDX55Q8NHQ9 600 aaKnown RBP eCLIP24.99■■□□□ 1.59
CLN6-207ENST00000566347 OPTNQ96CV9 577 aa24.99■■□□□ 1.59
CLN6-207ENST00000566347 DAGLAQ9Y4D2 1042 aa24.99■■□□□ 1.59
CLN6-207ENST00000566347 FKTNO75072 461 aa24.98■■□□□ 1.59
CLN6-207ENST00000566347 TIMM10P62072 90 aa24.98■■□□□ 1.59
CLN6-207ENST00000566347 PDS5AQ29RF7 1337 aaKnown RBP24.97■■□□□ 1.59
CLN6-207ENST00000566347 A0A1B0GUL7 405 aa24.97■■□□□ 1.59
CLN6-207ENST00000566347 IGF2BP3O00425 579 aaKnown RBP eCLIP24.97■■□□□ 1.59
CLN6-207ENST00000566347 TFCP2Q12800 502 aa24.97■■□□□ 1.59
CLN6-207ENST00000566347 VGLL4Q14135 290 aa24.97■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms