RNA–Protein interactions for RNA: ENST00000566333.1

CDH13-208, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-208ENST00000566333 DPY19L2Q6NUT2 758 aa9.97□□□□□ -0.81
CDH13-208ENST00000566333 TBC1D9Q6ZT07 1266 aa9.97□□□□□ -0.81
CDH13-208ENST00000566333 KIAA0825Q8IV33 1275 aa9.97□□□□□ -0.81
CDH13-208ENST00000566333 ZNF784Q8NCA9 323 aaPredicted RBP9.97□□□□□ -0.81
CDH13-208ENST00000566333 TRPM4Q8TD43 1214 aa9.97□□□□□ -0.81
CDH13-208ENST00000566333 GPATCH3Q96I76 525 aa9.97□□□□□ -0.81
CDH13-208ENST00000566333 HAUS7Q99871 368 aa9.97□□□□□ -0.81
CDH13-208ENST00000566333 BOLA2Q9H3K6 86 aa9.97□□□□□ -0.81
CDH13-208ENST00000566333 OSBPL3Q9H4L5 887 aa9.97□□□□□ -0.81
CDH13-208ENST00000566333 MYH1P12882 1939 aa9.97□□□□□ -0.81
CDH13-208ENST00000566333 RFX7Q2KHR2 1363 aa9.97□□□□□ -0.81
CDH13-208ENST00000566333 BAZ2AQ9UIF9 1905 aaKnown RBP9.97□□□□□ -0.81
CDH13-208ENST00000566333 OTOFQ9HC10 1997 aa9.96□□□□□ -0.81
CDH13-208ENST00000566333 USP17L8P0C7I0 530 aa9.96□□□□□ -0.82
CDH13-208ENST00000566333 ZBED3Q96IU2 234 aaPredicted RBP9.96□□□□□ -0.82
CDH13-208ENST00000566333 DNAJC2Q99543 621 aaKnown RBP9.96□□□□□ -0.82
CDH13-208ENST00000566333 TAF1DQ9H5J8 278 aaPredicted RBP9.96□□□□□ -0.82
CDH13-208ENST00000566333 HACL1Q9UJ83 578 aa9.96□□□□□ -0.82
CDH13-208ENST00000566333 SUGT1Q9Y2Z0 365 aa9.96□□□□□ -0.82
CDH13-208ENST00000566333 PCDHAC2Q9Y5I4 1007 aa9.96□□□□□ -0.82
CDH13-208ENST00000566333 IQCA1LA6NCM1 817 aa9.95□□□□□ -0.82
CDH13-208ENST00000566333 F8W031 263 aaPredicted RBP9.95□□□□□ -0.82
CDH13-208ENST00000566333 GOLIM4O00461 696 aa9.95□□□□□ -0.82
CDH13-208ENST00000566333 KIF3CO14782 793 aa9.95□□□□□ -0.82
CDH13-208ENST00000566333 GLRX3O76003 335 aaKnown RBP9.95□□□□□ -0.82
CDH13-208ENST00000566333 POTEIP0CG38 1075 aa9.95□□□□□ -0.82
CDH13-208ENST00000566333 POTEJP0CG39 1038 aa9.95□□□□□ -0.82
CDH13-208ENST00000566333 EPHX2P34913 555 aa9.95□□□□□ -0.82
CDH13-208ENST00000566333 HIRAP54198 1017 aaPredicted RBP9.95□□□□□ -0.82
CDH13-208ENST00000566333 DIXDC1Q155Q3 683 aa9.95□□□□□ -0.82
CDH13-208ENST00000566333 ZGPATQ8N5A5 531 aaKnown RBP9.95□□□□□ -0.82
CDH13-208ENST00000566333 ADARB2Q9NS39 739 aaKnown RBP9.95□□□□□ -0.82
CDH13-208ENST00000566333 PAG1Q9NWQ8 432 aa9.95□□□□□ -0.82
CDH13-208ENST00000566333 ZBTB47Q9UFB7 747 aaPredicted RBP9.95□□□□□ -0.82
CDH13-208ENST00000566333 ABCF2Q9UG63 623 aa9.95□□□□□ -0.82
CDH13-208ENST00000566333 CNOT7Q9UIV1 285 aaKnown RBP9.95□□□□□ -0.82
CDH13-208ENST00000566333 TTF2Q9UNY4 1162 aaKnown RBP9.95□□□□□ -0.82
CDH13-208ENST00000566333 GAKO14976 1311 aa9.95□□□□□ -0.82
CDH13-208ENST00000566333 LAMA4Q16363 1823 aa9.95□□□□□ -0.82
CDH13-208ENST00000566333 MAST3O60307 1309 aa9.94□□□□□ -0.82
CDH13-208ENST00000566333 ASTN2O75129 1339 aaPredicted RBP9.94□□□□□ -0.82
CDH13-208ENST00000566333 ERC2O15083 957 aa9.94□□□□□ -0.82
CDH13-208ENST00000566333 CHGBP05060 677 aa9.94□□□□□ -0.82
CDH13-208ENST00000566333 LDHBP07195 334 aaKnown RBP9.94□□□□□ -0.82
CDH13-208ENST00000566333 GSPT1P15170 499 aaKnown RBP9.94□□□□□ -0.82
CDH13-208ENST00000566333 LMOD1P29536 600 aaPredicted RBP9.94□□□□□ -0.82
CDH13-208ENST00000566333 MECOMQ03112 1051 aa9.94□□□□□ -0.82
CDH13-208ENST00000566333 KIF4BQ2VIQ3 1234 aa9.94□□□□□ -0.82
CDH13-208ENST00000566333 TBC1D10BQ4KMP7 808 aaPredicted RBP9.94□□□□□ -0.82
CDH13-208ENST00000566333 SAMD7Q7Z3H4 446 aa9.94□□□□□ -0.82
CDH13-208ENST00000566333 ADGRA1Q86SQ6 560 aa9.94□□□□□ -0.82
CDH13-208ENST00000566333 MTMR14Q8NCE2 650 aa9.94□□□□□ -0.82
CDH13-208ENST00000566333 NSUN4Q96CB9 384 aaKnown RBP9.94□□□□□ -0.82
CDH13-208ENST00000566333 RRAGCQ9HB90 399 aa9.94□□□□□ -0.82
CDH13-208ENST00000566333 GPBP1L1Q9HC44 474 aaPredicted RBP9.94□□□□□ -0.82
CDH13-208ENST00000566333 MYOZ2Q9NPC6 264 aa9.94□□□□□ -0.82
CDH13-208ENST00000566333 SERPINA10Q9UK55 444 aa9.94□□□□□ -0.82
CDH13-208ENST00000566333 DAGLAQ9Y4D2 1042 aa9.94□□□□□ -0.82
CDH13-208ENST00000566333 MYH8P13535 1937 aa9.94□□□□□ -0.82
CDH13-208ENST00000566333 MROH7-TTC4A0A0A0MT08 1334 aa9.93□□□□□ -0.82
CDH13-208ENST00000566333 TCRBV5S4A2TA0A5A2 114 aa9.93□□□□□ -0.82
CDH13-208ENST00000566333 SPDYE2BA6NHP3 402 aa9.93□□□□□ -0.82
CDH13-208ENST00000566333 MAP4K4O95819 1239 aaPredicted RBP9.93□□□□□ -0.82
CDH13-208ENST00000566333 SPDYE6P0CI01 402 aa9.93□□□□□ -0.82
CDH13-208ENST00000566333 VEGFAP15692 232 aaPredicted RBP9.93□□□□□ -0.82
CDH13-208ENST00000566333 CRKP46108 304 aa9.93□□□□□ -0.82
CDH13-208ENST00000566333 HDLBPQ00341 1268 aaKnown RBP9.93□□□□□ -0.82
CDH13-208ENST00000566333 CFAP100Q494V2 611 aa9.93□□□□□ -0.82
CDH13-208ENST00000566333 ERICH6Q7L0X2 663 aa9.93□□□□□ -0.82
CDH13-208ENST00000566333 DZIP1Q86YF9 867 aaKnown RBP9.93□□□□□ -0.82
CDH13-208ENST00000566333 ZDHHC15Q96MV8 337 aa9.93□□□□□ -0.82
CDH13-208ENST00000566333 H7C1D1 291 aa9.92□□□□□ -0.82
CDH13-208ENST00000566333 WNT10BO00744 389 aa9.92□□□□□ -0.82
CDH13-208ENST00000566333 IDH1O75874 414 aaKnown RBP9.92□□□□□ -0.82
CDH13-208ENST00000566333 PDE6AP16499 860 aa9.92□□□□□ -0.82
CDH13-208ENST00000566333 MMP14P50281 582 aa9.92□□□□□ -0.82
CDH13-208ENST00000566333 TTF1Q15361 905 aaPredicted RBP9.92□□□□□ -0.82
CDH13-208ENST00000566333 NBPF9Q3BBW0 867 aa9.92□□□□□ -0.82
CDH13-208ENST00000566333 SLFNL1Q499Z3 407 aa9.92□□□□□ -0.82
CDH13-208ENST00000566333 TTC22Q5TAA0 569 aa9.92□□□□□ -0.82
CDH13-208ENST00000566333 SPTY2D1Q68D10 685 aaPredicted RBP9.92□□□□□ -0.82
CDH13-208ENST00000566333 APOBEC3HQ6NTF7 200 aaKnown RBP9.92□□□□□ -0.82
CDH13-208ENST00000566333 HHIPL2Q6UWX4 724 aa9.92□□□□□ -0.82
CDH13-208ENST00000566333 USP50Q70EL3 339 aaPredicted RBP9.92□□□□□ -0.82
CDH13-208ENST00000566333 OGFOD1Q8N543 542 aa9.92□□□□□ -0.82
CDH13-208ENST00000566333 KBTBD3Q8NAB2 608 aa9.92□□□□□ -0.82
CDH13-208ENST00000566333 TEKT1Q969V4 418 aa9.92□□□□□ -0.82
CDH13-208ENST00000566333 RAI14Q9P0K7 980 aa9.92□□□□□ -0.82
CDH13-208ENST00000566333 LRP2BPQ9P2M1 347 aa9.92□□□□□ -0.82
CDH13-208ENST00000566333 HDAC9Q9UKV0 1011 aa9.92□□□□□ -0.82
CDH13-208ENST00000566333 SSC5DA1L4H1 1573 aa9.92□□□□□ -0.82
CDH13-208ENST00000566333 ATAD5Q96QE3 1844 aa9.91□□□□□ -0.82
CDH13-208ENST00000566333 IGSF3O75054 1194 aa9.91□□□□□ -0.82
CDH13-208ENST00000566333 ADD2P35612 726 aa9.91□□□□□ -0.82
CDH13-208ENST00000566333 MAGEB6Q8N7X4 407 aa9.91□□□□□ -0.82
CDH13-208ENST00000566333 FAM163AQ96GL9 167 aaPredicted RBP9.91□□□□□ -0.82
CDH13-208ENST00000566333 PRMT6Q96LA8 375 aaPredicted RBP9.91□□□□□ -0.82
CDH13-208ENST00000566333 MRIQ9BWK5 157 aa9.91□□□□□ -0.82
CDH13-208ENST00000566333 GGA3Q9NZ52 723 aa9.91□□□□□ -0.82
CDH13-208ENST00000566333 GTF3C3Q9Y5Q9 886 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms