RNA–Protein interactions for RNA: ENST00000566290.5

RAB40C-210, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 753 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-210ENST00000566290 TIMM10P62072 90 aa20.12■□□□□ 0.81
RAB40C-210ENST00000566290 RNF20Q5VTR2 975 aa20.12■□□□□ 0.81
RAB40C-210ENST00000566290 LPIN2Q92539 896 aa20.12■□□□□ 0.81
RAB40C-210ENST00000566290 SLKQ9H2G2 1235 aaPredicted RBP20.12■□□□□ 0.81
RAB40C-210ENST00000566290 CNNM1Q9NRU3 951 aa20.12■□□□□ 0.81
RAB40C-210ENST00000566290 LTBP1Q14766 1721 aa20.12■□□□□ 0.81
RAB40C-210ENST00000566290 UQCRFS1P1P0C7P4 283 aa20.11■□□□□ 0.81
RAB40C-210ENST00000566290 ARID4AP29374 1257 aaPredicted RBP20.11■□□□□ 0.81
RAB40C-210ENST00000566290 NEK4P51957 841 aa20.11■□□□□ 0.81
RAB40C-210ENST00000566290 DGKZQ13574 1117 aa20.11■□□□□ 0.81
RAB40C-210ENST00000566290 ZMYM1Q5SVZ6 1142 aa20.11■□□□□ 0.81
RAB40C-210ENST00000566290 CLEC17AQ6ZS10 378 aa20.11■□□□□ 0.81
RAB40C-210ENST00000566290 FAM227BQ96M60 508 aa20.11■□□□□ 0.81
RAB40C-210ENST00000566290 CDC5LQ99459 802 aaKnown RBP20.11■□□□□ 0.81
RAB40C-210ENST00000566290 ALDH8A1Q9H2A2 487 aaPredicted RBP20.11■□□□□ 0.81
RAB40C-210ENST00000566290 DUOX1Q9NRD9 1551 aa20.1■□□□□ 0.81
RAB40C-210ENST00000566290 TRAF5O00463 557 aa20.1■□□□□ 0.81
RAB40C-210ENST00000566290 TAF5LO75529 589 aa20.1■□□□□ 0.81
RAB40C-210ENST00000566290 ZKSCAN1P17029 563 aaPredicted RBP20.1■□□□□ 0.81
RAB40C-210ENST00000566290 MAP2K2P36507 400 aa20.1■□□□□ 0.81
RAB40C-210ENST00000566290 MCMDC2Q4G0Z9 681 aa20.1■□□□□ 0.81
RAB40C-210ENST00000566290 TTC14Q96N46 770 aa20.1■□□□□ 0.81
RAB40C-210ENST00000566290 TLL2Q9Y6L7 1015 aa20.1■□□□□ 0.81
RAB40C-210ENST00000566290 LRRC37AA6NMS7 1700 aa20.1■□□□□ 0.81
RAB40C-210ENST00000566290 PTH1RQ03431 593 aa20.09■□□□□ 0.81
RAB40C-210ENST00000566290 TTF1Q15361 905 aaPredicted RBP20.09■□□□□ 0.81
RAB40C-210ENST00000566290 TTC39AQ5SRH9 613 aa20.09■□□□□ 0.81
RAB40C-210ENST00000566290 GPC2Q8N158 579 aa20.09■□□□□ 0.81
RAB40C-210ENST00000566290 DNAJC2Q99543 621 aaKnown RBP20.09■□□□□ 0.81
RAB40C-210ENST00000566290 DSCC1Q9BVC3 393 aa20.09■□□□□ 0.81
RAB40C-210ENST00000566290 RBM8AQ9Y5S9 174 aaKnown RBP20.09■□□□□ 0.81
RAB40C-210ENST00000566290 U3KPZ7 1027 aaPredicted RBP20.09■□□□□ 0.81
RAB40C-210ENST00000566290 HSP90AA1P07900 732 aaKnown RBP20.08■□□□□ 0.81
RAB40C-210ENST00000566290 IGHMBP2P38935 993 aaKnown RBP20.08■□□□□ 0.81
RAB40C-210ENST00000566290 RPS8P62241 208 aaKnown RBP20.08■□□□□ 0.81
RAB40C-210ENST00000566290 KRT32Q14532 448 aa20.08■□□□□ 0.81
RAB40C-210ENST00000566290 RAB3GAP1Q15042 981 aa20.08■□□□□ 0.81
RAB40C-210ENST00000566290 MPNDQ8N594 471 aa20.08■□□□□ 0.81
RAB40C-210ENST00000566290 RTFDC1Q9BY42 306 aaPredicted RBP20.08■□□□□ 0.81
RAB40C-210ENST00000566290 ZSWIM6Q9HCJ5 1215 aa20.08■□□□□ 0.81
RAB40C-210ENST00000566290 RNF113AO15541 343 aaKnown RBP20.07■□□□□ 0.8
RAB40C-210ENST00000566290 SLC5A1P13866 664 aa20.07■□□□□ 0.8
RAB40C-210ENST00000566290 PSMA5P28066 241 aa20.07■□□□□ 0.8
RAB40C-210ENST00000566290 AOC3Q16853 763 aa20.07■□□□□ 0.8
RAB40C-210ENST00000566290 GORABQ5T7V8 394 aa20.07■□□□□ 0.8
RAB40C-210ENST00000566290 VPS53Q5VIR6 699 aa20.07■□□□□ 0.8
RAB40C-210ENST00000566290 DPP8Q6V1X1 898 aaPredicted RBP20.07■□□□□ 0.8
RAB40C-210ENST00000566290 MPHOSPH8Q99549 860 aa20.07■□□□□ 0.8
RAB40C-210ENST00000566290 GJA3Q9Y6H8 435 aa20.07■□□□□ 0.8
RAB40C-210ENST00000566290 GOLIM4O00461 696 aa20.06■□□□□ 0.8
RAB40C-210ENST00000566290 EPS15P42566 896 aa20.06■□□□□ 0.8
RAB40C-210ENST00000566290 NUCB2P80303 420 aa20.06■□□□□ 0.8
RAB40C-210ENST00000566290 GPSM2P81274 684 aa20.06■□□□□ 0.8
RAB40C-210ENST00000566290 GRIPAP1Q4V328 841 aa20.06■□□□□ 0.8
RAB40C-210ENST00000566290 CREB3L3Q68CJ9 461 aa20.06■□□□□ 0.8
RAB40C-210ENST00000566290 ZSCAN25Q6NSZ9 544 aa20.06■□□□□ 0.8
RAB40C-210ENST00000566290 RASEFQ8IZ41 740 aa20.06■□□□□ 0.8
RAB40C-210ENST00000566290 TRPM7Q96QT4 1865 aa20.05■□□□□ 0.8
RAB40C-210ENST00000566290 PPIP5K2O43314 1243 aa20.05■□□□□ 0.8
RAB40C-210ENST00000566290 IGSF3O75054 1194 aa20.05■□□□□ 0.8
RAB40C-210ENST00000566290 PTMSP20962 102 aa20.05■□□□□ 0.8
RAB40C-210ENST00000566290 ADORA1P30542 326 aa20.05■□□□□ 0.8
RAB40C-210ENST00000566290 ZNF589Q86UQ0 364 aaPredicted RBP20.05■□□□□ 0.8
RAB40C-210ENST00000566290 LARGE2Q8N3Y3 721 aa20.05■□□□□ 0.8
RAB40C-210ENST00000566290 EDC3Q96F86 508 aaKnown RBP20.05■□□□□ 0.8
RAB40C-210ENST00000566290 TMX3Q96JJ7 454 aa20.05■□□□□ 0.8
RAB40C-210ENST00000566290 BSDC1Q9NW68 430 aaPredicted RBP20.05■□□□□ 0.8
RAB40C-210ENST00000566290 SLC27A2O14975 620 aa20.04■□□□□ 0.8
RAB40C-210ENST00000566290 CA12O43570 354 aa20.04■□□□□ 0.8
RAB40C-210ENST00000566290 CYP2E1P05181 493 aaPredicted RBP20.04■□□□□ 0.8
RAB40C-210ENST00000566290 SOX10P56693 466 aa20.04■□□□□ 0.8
RAB40C-210ENST00000566290 TMC4Q7Z404 712 aa20.04■□□□□ 0.8
RAB40C-210ENST00000566290 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.04■□□□□ 0.8
RAB40C-210ENST00000566290 TMX4Q9H1E5 349 aaPredicted RBP20.04■□□□□ 0.8
RAB40C-210ENST00000566290 POLLQ9UGP5 575 aa20.04■□□□□ 0.8
RAB40C-210ENST00000566290 NSFL1CQ9UNZ2 370 aaKnown RBP20.04■□□□□ 0.8
RAB40C-210ENST00000566290 PDS5AQ29RF7 1337 aaKnown RBP20.03■□□□□ 0.8
RAB40C-210ENST00000566290 SCNN1DP51172 638 aa20.03■□□□□ 0.8
RAB40C-210ENST00000566290 TMED8Q6PL24 325 aaPredicted RBP20.03■□□□□ 0.8
RAB40C-210ENST00000566290 JDP2Q8WYK2 163 aa20.03■□□□□ 0.8
RAB40C-210ENST00000566290 APPBP2Q92624 585 aa20.03■□□□□ 0.8
RAB40C-210ENST00000566290 ZSCAN31Q96LW9 406 aaPredicted RBP20.03■□□□□ 0.8
RAB40C-210ENST00000566290 CYP46A1Q9Y6A2 500 aa20.03■□□□□ 0.8
RAB40C-210ENST00000566290 ZNF804BA4D1E1 1349 aa20.02■□□□□ 0.8
RAB40C-210ENST00000566290 WTIPA6NIX2 430 aaPredicted RBP20.02■□□□□ 0.8
RAB40C-210ENST00000566290 LMOD1P29536 600 aaPredicted RBP20.02■□□□□ 0.8
RAB40C-210ENST00000566290 UBE4AQ14139 1066 aa20.02■□□□□ 0.8
RAB40C-210ENST00000566290 NBR1Q14596 966 aa20.02■□□□□ 0.8
RAB40C-210ENST00000566290 CCDC102BQ68D86 513 aa20.02■□□□□ 0.8
RAB40C-210ENST00000566290 CIAPIN1Q6FI81 312 aa20.02■□□□□ 0.8
RAB40C-210ENST00000566290 RUFY3Q7L099 469 aa20.02■□□□□ 0.8
RAB40C-210ENST00000566290 SAPCD2Q86UD0 394 aa20.02■□□□□ 0.8
RAB40C-210ENST00000566290 ANKRD18AQ8IVF6 992 aa20.02■□□□□ 0.8
RAB40C-210ENST00000566290 SH2B1Q9NRF2 756 aaPredicted RBP20.02■□□□□ 0.8
RAB40C-210ENST00000566290 MAST3O60307 1309 aa20.02■□□□□ 0.79
RAB40C-210ENST00000566290 PDIA4P13667 645 aaKnown RBP20.01■□□□□ 0.79
RAB40C-210ENST00000566290 MCAMP43121 646 aa20.01■□□□□ 0.79
RAB40C-210ENST00000566290 KIAA2012Q0VF49 1180 aa20.01■□□□□ 0.79
RAB40C-210ENST00000566290 ANKRD1Q15327 319 aa20.01■□□□□ 0.79
RAB40C-210ENST00000566290 UBE3CQ15386 1083 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms