RNA–Protein interactions for RNA: ENST00000565550.1

SPSB3-207, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 2

Gene SPSB3, Length 898 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-207ENST00000565550 NOB1Q9ULX3 412 aaKnown RBP23.7■■□□□ 1.38
SPSB3-207ENST00000565550 MANSC4A6NHS7 340 aaPredicted RBP23.69■■□□□ 1.38
SPSB3-207ENST00000565550 UNCXA6NJT0 531 aa23.69■■□□□ 1.38
SPSB3-207ENST00000565550 FRAT2O75474 233 aaPredicted RBP23.69■■□□□ 1.38
SPSB3-207ENST00000565550 ZBTB48P10074 688 aaPredicted RBP23.69■■□□□ 1.38
SPSB3-207ENST00000565550 IREB2P48200 963 aaKnown RBP23.69■■□□□ 1.38
SPSB3-207ENST00000565550 SOX10P56693 466 aa23.69■■□□□ 1.38
SPSB3-207ENST00000565550 INHBEP58166 350 aa23.69■■□□□ 1.38
SPSB3-207ENST00000565550 TNFAIP1Q13829 316 aa23.69■■□□□ 1.38
SPSB3-207ENST00000565550 PKN2Q16513 984 aaKnown RBP23.69■■□□□ 1.38
SPSB3-207ENST00000565550 YTHDC1Q96MU7 727 aaKnown RBP23.69■■□□□ 1.38
SPSB3-207ENST00000565550 CFHR5Q9BXR6 569 aa23.69■■□□□ 1.38
SPSB3-207ENST00000565550 BCAMP50895 628 aa23.68■■□□□ 1.38
SPSB3-207ENST00000565550 HPS5Q9UPZ3 1129 aa23.68■■□□□ 1.38
SPSB3-207ENST00000565550 TNNQ9UQP3 1299 aa23.68■■□□□ 1.38
SPSB3-207ENST00000565550 TCP10L2B9ZVM9 353 aa23.67■■□□□ 1.38
SPSB3-207ENST00000565550 ALDH1A1P00352 501 aa23.67■■□□□ 1.38
SPSB3-207ENST00000565550 IFNL1Q8IU54 200 aa23.67■■□□□ 1.38
SPSB3-207ENST00000565550 ECM29Q5VYK3 1845 aa23.67■■□□□ 1.38
SPSB3-207ENST00000565550 FKTNO75072 461 aa23.66■■□□□ 1.38
SPSB3-207ENST00000565550 CDAN1Q8IWY9 1227 aa23.66■■□□□ 1.38
SPSB3-207ENST00000565550 ANKRD13AQ8IZ07 590 aa23.66■■□□□ 1.38
SPSB3-207ENST00000565550 TBC1D22AQ8WUA7 517 aa23.66■■□□□ 1.38
SPSB3-207ENST00000565550 GJA5P36382 358 aa23.65■■□□□ 1.38
SPSB3-207ENST00000565550 RFX5P48382 616 aaPredicted RBP23.65■■□□□ 1.38
SPSB3-207ENST00000565550 TEPSINQ96N21 525 aa23.65■■□□□ 1.38
SPSB3-207ENST00000565550 EYA2O00167 538 aa23.64■■□□□ 1.37
SPSB3-207ENST00000565550 IGF2BP3O00425 579 aaKnown RBP eCLIP23.64■■□□□ 1.37
SPSB3-207ENST00000565550 IFIT1P09914 478 aaKnown RBP23.64■■□□□ 1.37
SPSB3-207ENST00000565550 FGFR2P21802 821 aa23.64■■□□□ 1.37
SPSB3-207ENST00000565550 HDLBPQ00341 1268 aaKnown RBP23.64■■□□□ 1.37
SPSB3-207ENST00000565550 PUM3Q15397 648 aaKnown RBP23.64■■□□□ 1.37
SPSB3-207ENST00000565550 TMEM39BQ9GZU3 492 aa23.64■■□□□ 1.37
SPSB3-207ENST00000565550 TNNI2P48788 182 aa23.63■■□□□ 1.37
SPSB3-207ENST00000565550 TEKT1Q969V4 418 aa23.63■■□□□ 1.37
SPSB3-207ENST00000565550 ELP3Q9H9T3 547 aa23.63■■□□□ 1.37
SPSB3-207ENST00000565550 CACNB3P54284 484 aa23.61■■□□□ 1.37
SPSB3-207ENST00000565550 FBXO46Q6PJ61 603 aaPredicted RBP23.61■■□□□ 1.37
SPSB3-207ENST00000565550 FRAT1Q92837 279 aaPredicted RBP23.61■■□□□ 1.37
SPSB3-207ENST00000565550 MRIQ9BWK5 157 aa23.61■■□□□ 1.37
SPSB3-207ENST00000565550 KIF16BQ96L93 1317 aa23.6■■□□□ 1.37
SPSB3-207ENST00000565550 UBTFL1P0CB47 393 aaPredicted RBP23.6■■□□□ 1.37
SPSB3-207ENST00000565550 PPP1R3FQ6ZSY5 799 aaPredicted RBP23.6■■□□□ 1.37
SPSB3-207ENST00000565550 ATG9AQ7Z3C6 839 aa23.6■■□□□ 1.37
SPSB3-207ENST00000565550 LPIN2Q92539 896 aa23.6■■□□□ 1.37
SPSB3-207ENST00000565550 OPTNQ96CV9 577 aa23.6■■□□□ 1.37
SPSB3-207ENST00000565550 TESPA1A2RU30 521 aaPredicted RBP23.59■■□□□ 1.37
SPSB3-207ENST00000565550 SLC5A1P13866 664 aa23.59■■□□□ 1.37
SPSB3-207ENST00000565550 MAP3K9P80192 1104 aa23.59■■□□□ 1.37
SPSB3-207ENST00000565550 OTUD7BQ6GQQ9 843 aa23.59■■□□□ 1.37
SPSB3-207ENST00000565550 ZDHHC15Q96MV8 337 aa23.59■■□□□ 1.37
SPSB3-207ENST00000565550 PTPN18Q99952 460 aa23.59■■□□□ 1.37
SPSB3-207ENST00000565550 SUGT1Q9Y2Z0 365 aa23.59■■□□□ 1.37
SPSB3-207ENST00000565550 APOBEC3HQ6NTF7 200 aaKnown RBP23.58■■□□□ 1.37
SPSB3-207ENST00000565550 CNKSR2Q8WXI2 1034 aa23.58■■□□□ 1.37
SPSB3-207ENST00000565550 SIL1Q9H173 461 aa23.58■■□□□ 1.37
SPSB3-207ENST00000565550 ARAP2Q8WZ64 1704 aa23.57■■□□□ 1.36
SPSB3-207ENST00000565550 TRIM27P14373 513 aa23.57■■□□□ 1.36
SPSB3-207ENST00000565550 CRHR2Q13324 411 aa23.57■■□□□ 1.36
SPSB3-207ENST00000565550 VGLL4Q14135 290 aa23.57■■□□□ 1.36
SPSB3-207ENST00000565550 DDX55Q8NHQ9 600 aaKnown RBP eCLIP23.57■■□□□ 1.361e-7■■■□□ 19
SPSB3-207ENST00000565550 MS4A4AQ96JQ5 239 aa23.57■■□□□ 1.36
SPSB3-207ENST00000565550 API5Q9BZZ5 524 aaKnown RBP23.57■■□□□ 1.36
SPSB3-207ENST00000565550 TMOD2Q9NZR1 351 aa23.57■■□□□ 1.36
SPSB3-207ENST00000565550 MAST3O60307 1309 aa23.57■■□□□ 1.36
SPSB3-207ENST00000565550 HHIPL2Q6UWX4 724 aa23.56■■□□□ 1.36
SPSB3-207ENST00000565550 WDR66Q8TBY9 1149 aa23.56■■□□□ 1.36
SPSB3-207ENST00000565550 CLUAP1Q96AJ1 413 aa23.56■■□□□ 1.36
SPSB3-207ENST00000565550 TRIM17Q9Y577 477 aa23.56■■□□□ 1.36
SPSB3-207ENST00000565550 FAM83AQ86UY5 434 aa23.55■■□□□ 1.36
SPSB3-207ENST00000565550 CEP126Q9P2H0 1117 aa23.55■■□□□ 1.36
SPSB3-207ENST00000565550 FBXO3Q9UK99 471 aa23.55■■□□□ 1.36
SPSB3-207ENST00000565550 CSADQ9Y600 493 aa23.55■■□□□ 1.36
SPSB3-207ENST00000565550 CIAO1O76071 339 aa23.54■■□□□ 1.36
SPSB3-207ENST00000565550 ATP2B3Q16720 1220 aa23.54■■□□□ 1.36
SPSB3-207ENST00000565550 FKBP1CQ5VVH2 108 aa23.54■■□□□ 1.36
SPSB3-207ENST00000565550 OTOP1Q7RTM1 612 aa23.54■■□□□ 1.36
SPSB3-207ENST00000565550 LRRFIP2Q9Y608 721 aaKnown RBP23.54■■□□□ 1.36
SPSB3-207ENST00000565550 ATF7IPQ6VMQ6 1270 aa23.53■■□□□ 1.36
SPSB3-207ENST00000565550 BRI3BPQ8WY22 251 aa23.53■■□□□ 1.36
SPSB3-207ENST00000565550 ARHGAP45Q92619 1136 aa23.53■■□□□ 1.36
SPSB3-207ENST00000565550 CCL15-CCL14A0A0B4J2E2 113 aa23.52■■□□□ 1.36
SPSB3-207ENST00000565550 GTF2A2P52657 109 aa23.52■■□□□ 1.36
SPSB3-207ENST00000565550 CCL15Q16663 113 aa23.52■■□□□ 1.36
SPSB3-207ENST00000565550 CD99L2Q8TCZ2 262 aa23.52■■□□□ 1.36
SPSB3-207ENST00000565550 OTUD5Q96G74 571 aa23.52■■□□□ 1.36
SPSB3-207ENST00000565550 ERO1AQ96HE7 468 aa23.52■■□□□ 1.36
SPSB3-207ENST00000565550 PA2G4Q9UQ80 394 aaKnown RBP23.52■■□□□ 1.36
SPSB3-207ENST00000565550 HDAC5Q9UQL6 1122 aa23.52■■□□□ 1.36
SPSB3-207ENST00000565550 IL15P40933 162 aaPredicted RBP23.51■■□□□ 1.35
SPSB3-207ENST00000565550 WRNIP1Q96S55 665 aa23.51■■□□□ 1.35
SPSB3-207ENST00000565550 MEIS3Q99687 375 aa23.51■■□□□ 1.35
SPSB3-207ENST00000565550 GNL3LQ9NVN8 582 aaKnown RBP23.51■■□□□ 1.35
SPSB3-207ENST00000565550 OTOFQ9HC10 1997 aa23.51■■□□□ 1.35
SPSB3-207ENST00000565550 SPDYE5A6NIY4 337 aa23.5■■□□□ 1.35
SPSB3-207ENST00000565550 SP3Q02447 781 aa23.5■■□□□ 1.35
SPSB3-207ENST00000565550 DIXDC1Q155Q3 683 aa23.5■■□□□ 1.35
SPSB3-207ENST00000565550 ZKSCAN2Q63HK3 967 aa23.5■■□□□ 1.35
SPSB3-207ENST00000565550 ZKSCAN4Q969J2 545 aaPredicted RBP23.5■■□□□ 1.35
SPSB3-207ENST00000565550 HOOK2Q96ED9 719 aa23.5■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms