RNA–Protein interactions for RNA: ENST00000565452.1

VPS9D1-205, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 178 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-205ENST00000565452 IRF6O14896 467 aa11.67□□□□□ -0.54
VPS9D1-205ENST00000565452 ADCY3O60266 1144 aa11.67□□□□□ -0.54
VPS9D1-205ENST00000565452 CTGFP29279 349 aa11.67□□□□□ -0.54
VPS9D1-205ENST00000565452 FCGRTP55899 365 aa11.67□□□□□ -0.54
VPS9D1-205ENST00000565452 DEFB118Q96PH6 123 aa11.67□□□□□ -0.54
VPS9D1-205ENST00000565452 GREM2Q9H772 168 aa11.67□□□□□ -0.54
VPS9D1-205ENST00000565452 ZNF70Q9UC06 446 aaPredicted RBP11.67□□□□□ -0.54
VPS9D1-205ENST00000565452 RPTORQ8N122 1335 aa11.66□□□□□ -0.54
VPS9D1-205ENST00000565452 DDX58O95786 925 aaKnown RBP11.66□□□□□ -0.54
VPS9D1-205ENST00000565452 PPIL2Q13356 520 aa11.66□□□□□ -0.54
VPS9D1-205ENST00000565452 SPDYE2Q495Y8 402 aa11.66□□□□□ -0.54
VPS9D1-205ENST00000565452 FAM109BQ6ICB4 259 aaPredicted RBP11.66□□□□□ -0.54
VPS9D1-205ENST00000565452 ANKRD23Q86SG2 305 aa11.66□□□□□ -0.54
VPS9D1-205ENST00000565452 C7orf61Q8IZ16 206 aa11.66□□□□□ -0.54
VPS9D1-205ENST00000565452 SYMPKQ92797 1274 aaKnown RBP11.66□□□□□ -0.54
VPS9D1-205ENST00000565452 HOOK2Q96ED9 719 aa11.66□□□□□ -0.54
VPS9D1-205ENST00000565452 TEPSINQ96N21 525 aa11.66□□□□□ -0.54
VPS9D1-205ENST00000565452 UBE2OQ9C0C9 1292 aaKnown RBP11.66□□□□□ -0.54
VPS9D1-205ENST00000565452 ZMYND8Q9ULU4 1186 aaPredicted RBP11.66□□□□□ -0.54
VPS9D1-205ENST00000565452 TCP10L2B9ZVM9 353 aa11.65□□□□□ -0.54
VPS9D1-205ENST00000565452 PDHXO00330 501 aa11.65□□□□□ -0.54
VPS9D1-205ENST00000565452 COL9A1P20849 921 aa11.65□□□□□ -0.54
VPS9D1-205ENST00000565452 KLRK1P26718 216 aa11.65□□□□□ -0.54
VPS9D1-205ENST00000565452 TMPOP42166 694 aaKnown RBP11.65□□□□□ -0.54
VPS9D1-205ENST00000565452 PRKCZQ05513 592 aa11.65□□□□□ -0.54
VPS9D1-205ENST00000565452 PPATQ06203 517 aa11.65□□□□□ -0.54
VPS9D1-205ENST00000565452 ZNF804AQ7Z570 1209 aa11.65□□□□□ -0.54
VPS9D1-205ENST00000565452 ANKLE1Q8NAG6 615 aa11.65□□□□□ -0.54
VPS9D1-205ENST00000565452 PXYLP1Q8TE99 480 aa11.65□□□□□ -0.54
VPS9D1-205ENST00000565452 METTL22Q9BUU2 404 aaPredicted RBP11.65□□□□□ -0.54
VPS9D1-205ENST00000565452 TDRD3Q9H7E2 651 aaKnown RBP11.65□□□□□ -0.54
VPS9D1-205ENST00000565452 SERPINA10Q9UK55 444 aa11.65□□□□□ -0.54
VPS9D1-205ENST00000565452 UNC80Q8N2C7 3258 aa11.65□□□□□ -0.54
VPS9D1-205ENST00000565452 POTEB2H3BUK9 544 aa11.64□□□□□ -0.55
VPS9D1-205ENST00000565452 IL1R1P14778 569 aa11.64□□□□□ -0.55
VPS9D1-205ENST00000565452 MAGEA10P43363 369 aaPredicted RBP11.64□□□□□ -0.55
VPS9D1-205ENST00000565452 DUSP27Q5VZP5 1158 aa11.64□□□□□ -0.55
VPS9D1-205ENST00000565452 C15orf52Q6ZUT6 534 aaKnown RBP11.64□□□□□ -0.55
VPS9D1-205ENST00000565452 ZKSCAN4Q969J2 545 aaPredicted RBP11.64□□□□□ -0.55
VPS9D1-205ENST00000565452 TMEM39BQ9GZU3 492 aa11.64□□□□□ -0.55
VPS9D1-205ENST00000565452 CRISPLD2Q9H0B8 497 aa11.64□□□□□ -0.55
VPS9D1-205ENST00000565452 PHAXQ9H814 394 aaKnown RBP11.64□□□□□ -0.55
VPS9D1-205ENST00000565452 SNCAIPQ9Y6H5 919 aa11.64□□□□□ -0.55
VPS9D1-205ENST00000565452 PSME4Q14997 1843 aa11.64□□□□□ -0.55
VPS9D1-205ENST00000565452 INHAP05111 366 aa11.63□□□□□ -0.55
VPS9D1-205ENST00000565452 FLT3LGP49771 235 aa11.63□□□□□ -0.55
VPS9D1-205ENST00000565452 CHRNDQ07001 517 aa11.63□□□□□ -0.55
VPS9D1-205ENST00000565452 DZIP1LQ8IYY4 767 aaKnown RBP11.63□□□□□ -0.55
VPS9D1-205ENST00000565452 WRNIP1Q96S55 665 aa11.63□□□□□ -0.55
VPS9D1-205ENST00000565452 CHMP4AQ9BY43 222 aa11.63□□□□□ -0.55
VPS9D1-205ENST00000565452 NBPF3Q9H094 633 aa11.63□□□□□ -0.55
VPS9D1-205ENST00000565452 PAK6Q9NQU5 681 aaPredicted RBP11.63□□□□□ -0.55
VPS9D1-205ENST00000565452 GABRQQ9UN88 632 aa11.63□□□□□ -0.55
VPS9D1-205ENST00000565452 ZNF646O15015 1829 aaPredicted RBP11.63□□□□□ -0.55
VPS9D1-205ENST00000565452 AOX1Q06278 1338 aa11.62□□□□□ -0.55
VPS9D1-205ENST00000565452 FAM205AQ6ZU69 1335 aa11.62□□□□□ -0.55
VPS9D1-205ENST00000565452 IRS2Q9Y4H2 1338 aa11.62□□□□□ -0.55
VPS9D1-205ENST00000565452 ELNP15502 786 aa11.62□□□□□ -0.55
VPS9D1-205ENST00000565452 SYN1P17600 705 aa11.62□□□□□ -0.55
VPS9D1-205ENST00000565452 ITGA6P23229 1130 aa11.62□□□□□ -0.55
VPS9D1-205ENST00000565452 IRF5Q13568 498 aa11.62□□□□□ -0.55
VPS9D1-205ENST00000565452 NEUROD2Q15784 382 aa11.62□□□□□ -0.55
VPS9D1-205ENST00000565452 CDAN1Q8IWY9 1227 aa11.62□□□□□ -0.55
VPS9D1-205ENST00000565452 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.62□□□□□ -0.55
VPS9D1-205ENST00000565452 PARK7Q99497 189 aaKnown RBP11.62□□□□□ -0.55
VPS9D1-205ENST00000565452 TTF2Q9UNY4 1162 aaKnown RBP11.62□□□□□ -0.55
VPS9D1-205ENST00000565452 ADGRA2Q96PE1 1338 aa11.61□□□□□ -0.55
VPS9D1-205ENST00000565452 NEXNQ0ZGT2 675 aa11.61□□□□□ -0.55
VPS9D1-205ENST00000565452 DCAF15Q66K64 600 aa11.61□□□□□ -0.55
VPS9D1-205ENST00000565452 GUCD1Q96NT3 240 aa11.61□□□□□ -0.55
VPS9D1-205ENST00000565452 BCRP11274 1271 aa11.6□□□□□ -0.55
VPS9D1-205ENST00000565452 DIS3LQ8TF46 1054 aaKnown RBP11.6□□□□□ -0.55
VPS9D1-205ENST00000565452 FAM161BQ96MY7 647 aa11.6□□□□□ -0.55
VPS9D1-205ENST00000565452 JAG2Q9Y219 1238 aa11.6□□□□□ -0.55
VPS9D1-205ENST00000565452 MAP3K2Q9Y2U5 619 aa11.6□□□□□ -0.55
VPS9D1-205ENST00000565452 H7C1W4 665 aa11.59□□□□□ -0.55
VPS9D1-205ENST00000565452 SNAP23O00161 211 aa11.59□□□□□ -0.55
VPS9D1-205ENST00000565452 TNPO2O14787 897 aaKnown RBP11.59□□□□□ -0.55
VPS9D1-205ENST00000565452 TAF5LO75529 589 aa11.59□□□□□ -0.55
VPS9D1-205ENST00000565452 CRKP46108 304 aa11.59□□□□□ -0.55
VPS9D1-205ENST00000565452 MFSD14BQ5SR56 506 aa11.59□□□□□ -0.55
VPS9D1-205ENST00000565452 COA7Q96BR5 231 aa11.59□□□□□ -0.55
VPS9D1-205ENST00000565452 ZNF341Q9BYN7 854 aa11.59□□□□□ -0.55
VPS9D1-205ENST00000565452 C11orf49Q9H6J7 331 aa11.59□□□□□ -0.55
VPS9D1-205ENST00000565452 TAOK2Q9UL54 1235 aa11.59□□□□□ -0.55
VPS9D1-205ENST00000565452 KCNH4Q9UQ05 1017 aa11.59□□□□□ -0.55
VPS9D1-205ENST00000565452 ANKRD18BA2A2Z9 1011 aa11.58□□□□□ -0.56
VPS9D1-205ENST00000565452 CXCL11O14625 94 aa11.58□□□□□ -0.56
VPS9D1-205ENST00000565452 IGKV5-2P06315 115 aa11.58□□□□□ -0.56
VPS9D1-205ENST00000565452 CSF1RP07333 972 aa11.58□□□□□ -0.56
VPS9D1-205ENST00000565452 CYP2C8P10632 490 aa11.58□□□□□ -0.56
VPS9D1-205ENST00000565452 ZNF697Q5TEC3 545 aa11.58□□□□□ -0.56
VPS9D1-205ENST00000565452 KSR2Q6VAB6 950 aa11.58□□□□□ -0.56
VPS9D1-205ENST00000565452 FAM83AQ86UY5 434 aa11.58□□□□□ -0.56
VPS9D1-205ENST00000565452 FAM122AQ96E09 287 aa11.58□□□□□ -0.56
VPS9D1-205ENST00000565452 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.58□□□□□ -0.56
VPS9D1-205ENST00000565452 TMOD2Q9NZR1 351 aa11.58□□□□□ -0.56
VPS9D1-205ENST00000565452 LAMB1P07942 1786 aa11.57□□□□□ -0.56
VPS9D1-205ENST00000565452 HDLBPQ00341 1268 aaKnown RBP11.57□□□□□ -0.56
VPS9D1-205ENST00000565452 FKBP1CQ5VVH2 108 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms