RNA–Protein interactions for RNA: ENST00000565038.1

PALB2-203, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 344 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-203ENST00000565038 SRCIN1Q9C0H9 1055 aa7.43□□□□□ -1.22
PALB2-203ENST00000565038 GPN3Q9UHW5 284 aaPredicted RBP7.43□□□□□ -1.22
PALB2-203ENST00000565038 LOC100289279A0A1B0GTE1 492 aa7.42□□□□□ -1.22
PALB2-203ENST00000565038 FBXO24O75426 580 aa7.42□□□□□ -1.22
PALB2-203ENST00000565038 ECEL1O95672 775 aa7.42□□□□□ -1.22
PALB2-203ENST00000565038 DLGAP3O95886 979 aa7.42□□□□□ -1.22
PALB2-203ENST00000565038 EIF4BP23588 611 aaKnown RBP7.42□□□□□ -1.22
PALB2-203ENST00000565038 MAOBP27338 520 aa7.42□□□□□ -1.22
PALB2-203ENST00000565038 PSMD2Q13200 908 aa7.42□□□□□ -1.22
PALB2-203ENST00000565038 TPTE2Q6XPS3 522 aa7.42□□□□□ -1.22
PALB2-203ENST00000565038 GIPC2Q8TF65 315 aa7.42□□□□□ -1.22
PALB2-203ENST00000565038 MEGF10Q96KG7 1140 aa7.42□□□□□ -1.22
PALB2-203ENST00000565038 FRMD6Q96NE9 622 aa7.42□□□□□ -1.22
PALB2-203ENST00000565038 ZFYVE1Q9HBF4 777 aa7.42□□□□□ -1.22
PALB2-203ENST00000565038 FAM8A1Q9UBU6 413 aa7.42□□□□□ -1.22
PALB2-203ENST00000565038 AK5Q9Y6K8 562 aa7.42□□□□□ -1.22
PALB2-203ENST00000565038 CTSBP07858 339 aa7.41□□□□□ -1.22
PALB2-203ENST00000565038 GLB1P16278 677 aa7.41□□□□□ -1.22
PALB2-203ENST00000565038 DAB2P98082 770 aa7.41□□□□□ -1.22
PALB2-203ENST00000565038 POU4F3Q15319 338 aa7.41□□□□□ -1.22
PALB2-203ENST00000565038 DDX54Q8TDD1 881 aaKnown RBP7.41□□□□□ -1.22
PALB2-203ENST00000565038 RUSC1Q9BVN2 902 aa7.41□□□□□ -1.22
PALB2-203ENST00000565038 NRSN2Q9GZP1 204 aa7.41□□□□□ -1.22
PALB2-203ENST00000565038 TPSG1Q9NRR2 321 aa7.41□□□□□ -1.22
PALB2-203ENST00000565038 TMEM39AQ9NV64 488 aa7.41□□□□□ -1.22
PALB2-203ENST00000565038 CYP11A1P05108 521 aa7.4□□□□□ -1.22
PALB2-203ENST00000565038 PPP2R3AQ06190 1150 aa7.39□□□□□ -1.23
PALB2-203ENST00000565038 TP53INP1Q96A56 240 aa7.39□□□□□ -1.23
PALB2-203ENST00000565038 UBL7Q96S82 380 aaPredicted RBP7.39□□□□□ -1.23
PALB2-203ENST00000565038 CORO1BQ9BR76 489 aa7.39□□□□□ -1.23
PALB2-203ENST00000565038 ZC3H12CQ9C0D7 883 aaKnown RBP7.39□□□□□ -1.23
PALB2-203ENST00000565038 RNF208Q9H0X6 261 aa7.39□□□□□ -1.23
PALB2-203ENST00000565038 FURINP09958 794 aa7.38□□□□□ -1.23
PALB2-203ENST00000565038 Q6ZS46 218 aa7.38□□□□□ -1.23
PALB2-203ENST00000565038 TMC4Q7Z404 712 aa7.38□□□□□ -1.23
PALB2-203ENST00000565038 STK35Q8TDR2 534 aa7.38□□□□□ -1.23
PALB2-203ENST00000565038 NECAB3Q96P71 396 aaPredicted RBP7.38□□□□□ -1.23
PALB2-203ENST00000565038 SSBP4Q9BWG4 385 aaPredicted RBP7.38□□□□□ -1.23
PALB2-203ENST00000565038 TTF2Q9UNY4 1162 aaKnown RBP7.38□□□□□ -1.23
PALB2-203ENST00000565038 EIF4EBP3O60516 100 aaPredicted RBP7.37□□□□□ -1.23
PALB2-203ENST00000565038 PAGE1O75459 146 aa7.37□□□□□ -1.23
PALB2-203ENST00000565038 AP3B2Q13367 1082 aa7.37□□□□□ -1.23
PALB2-203ENST00000565038 ZNF326Q5BKZ1 582 aaKnown RBP7.37□□□□□ -1.23
PALB2-203ENST00000565038 EXOSC6Q5RKV6 272 aaKnown RBP7.37□□□□□ -1.23
PALB2-203ENST00000565038 NUTM2GQ5VZR2 741 aa7.37□□□□□ -1.23
PALB2-203ENST00000565038 DZIP1LQ8IYY4 767 aaKnown RBP7.37□□□□□ -1.23
PALB2-203ENST00000565038 TMPRSS13Q9BYE2 586 aa7.37□□□□□ -1.23
PALB2-203ENST00000565038 CEP44Q9C0F1 390 aa7.37□□□□□ -1.23
PALB2-203ENST00000565038 MRS2Q9HD23 443 aa7.37□□□□□ -1.23
PALB2-203ENST00000565038 PPM1HQ9ULR3 514 aa7.37□□□□□ -1.23
PALB2-203ENST00000565038 MEGF11A6BM72 1044 aa7.36□□□□□ -1.23
PALB2-203ENST00000565038 ENC1O14682 589 aa7.36□□□□□ -1.23
PALB2-203ENST00000565038 SORBS3O60504 671 aa7.36□□□□□ -1.23
PALB2-203ENST00000565038 CELA3AP09093 270 aa7.36□□□□□ -1.23
PALB2-203ENST00000565038 PDE3AQ14432 1141 aa7.36□□□□□ -1.23
PALB2-203ENST00000565038 MEI1Q5TIA1 1274 aa7.36□□□□□ -1.23
PALB2-203ENST00000565038 FDX2Q6P4F2 183 aa7.36□□□□□ -1.23
PALB2-203ENST00000565038 SULF2Q8IWU5 870 aa7.36□□□□□ -1.23
PALB2-203ENST00000565038 C12orf50Q8NA57 414 aaPredicted RBP7.36□□□□□ -1.23
PALB2-203ENST00000565038 CEP41Q9BYV8 373 aa7.36□□□□□ -1.23
PALB2-203ENST00000565038 VTI1BQ9UEU0 232 aa7.36□□□□□ -1.23
PALB2-203ENST00000565038 SART1O43290 800 aaKnown RBP7.35□□□□□ -1.23
PALB2-203ENST00000565038 GSTP1P09211 210 aaKnown RBP7.35□□□□□ -1.23
PALB2-203ENST00000565038 CTSHP09668 335 aa7.35□□□□□ -1.23
PALB2-203ENST00000565038 DRD2P14416 443 aa7.35□□□□□ -1.23
PALB2-203ENST00000565038 ZNF16P17020 682 aaPredicted RBP7.35□□□□□ -1.23
PALB2-203ENST00000565038 PREPP48147 710 aa7.35□□□□□ -1.23
PALB2-203ENST00000565038 ANKRD34AQ69YU3 496 aa7.35□□□□□ -1.23
PALB2-203ENST00000565038 KCNB2Q92953 911 aa7.35□□□□□ -1.23
PALB2-203ENST00000565038 CCDC86Q9H6F5 360 aaKnown RBP7.35□□□□□ -1.23
PALB2-203ENST00000565038 CBX8Q9HC52 389 aa7.35□□□□□ -1.23
PALB2-203ENST00000565038 LIG1P18858 919 aa7.34□□□□□ -1.23
PALB2-203ENST00000565038 NME2P22392 152 aa7.34□□□□□ -1.23
PALB2-203ENST00000565038 ARNTP27540 789 aa7.34□□□□□ -1.23
PALB2-203ENST00000565038 RSPO4Q2I0M5 234 aaPredicted RBP7.34□□□□□ -1.23
PALB2-203ENST00000565038 SMG8Q8ND04 991 aaKnown RBP7.34□□□□□ -1.23
PALB2-203ENST00000565038 UTP4Q969X6 686 aaKnown RBP7.34□□□□□ -1.23
PALB2-203ENST00000565038 WDR89Q96FK6 387 aaPredicted RBP7.34□□□□□ -1.23
PALB2-203ENST00000565038 FAM46AQ96IP4 442 aaKnown RBP7.34□□□□□ -1.23
PALB2-203ENST00000565038 CYP4F12Q9HCS2 524 aa7.34□□□□□ -1.23
PALB2-203ENST00000565038 RAD18Q9NS91 495 aa7.34□□□□□ -1.23
PALB2-203ENST00000565038 BMP6P22004 513 aa7.33□□□□□ -1.24
PALB2-203ENST00000565038 CCDC85BQ15834 202 aaPredicted RBP7.33□□□□□ -1.24
PALB2-203ENST00000565038 AKAP4Q5JQC9 854 aa7.33□□□□□ -1.24
PALB2-203ENST00000565038 NKAPLQ5M9Q1 402 aa7.33□□□□□ -1.24
PALB2-203ENST00000565038 RASIP1Q5U651 963 aa7.33□□□□□ -1.24
PALB2-203ENST00000565038 MPRIPQ6WCQ1 1025 aa7.33□□□□□ -1.24
PALB2-203ENST00000565038 PDZD3Q86UT5 571 aa7.33□□□□□ -1.24
PALB2-203ENST00000565038 ARMC10Q8N2F6 343 aa7.33□□□□□ -1.24
PALB2-203ENST00000565038 GRIN3AQ8TCU5 1115 aa7.33□□□□□ -1.24
PALB2-203ENST00000565038 SUGCTQ9HAC7 445 aa7.33□□□□□ -1.24
PALB2-203ENST00000565038 ZNF862O60290 1169 aa7.32□□□□□ -1.24
PALB2-203ENST00000565038 TIAF1O95411 115 aa7.32□□□□□ -1.24
PALB2-203ENST00000565038 TAF1CQ15572 869 aaPredicted RBP7.32□□□□□ -1.24
PALB2-203ENST00000565038 MAP3K11Q16584 847 aa7.32□□□□□ -1.24
PALB2-203ENST00000565038 HP1BP3Q5SSJ5 553 aaPredicted RBP7.32□□□□□ -1.24
PALB2-203ENST00000565038 PCNX4Q63HM2 1172 aa7.32□□□□□ -1.24
PALB2-203ENST00000565038 MAP1SQ66K74 1059 aaPredicted RBP7.32□□□□□ -1.24
PALB2-203ENST00000565038 SV2BQ7L1I2 683 aa7.32□□□□□ -1.24
PALB2-203ENST00000565038 RGS22Q8NE09 1264 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms