RNA–Protein interactions for RNA: ENST00000564899.1

SF3B3-205, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-205ENST00000564899 SOX10P56693 466 aa13.44□□□□□ -0.26
SF3B3-205ENST00000564899 SCARF1Q14162 830 aa13.44□□□□□ -0.26
SF3B3-205ENST00000564899 CC2D2BQ6DHV5 1058 aa13.44□□□□□ -0.26
SF3B3-205ENST00000564899 CASC1Q6TDU7 716 aa13.44□□□□□ -0.26
SF3B3-205ENST00000564899 C15orf52Q6ZUT6 534 aaKnown RBP13.44□□□□□ -0.26
SF3B3-205ENST00000564899 FBXO33Q7Z6M2 555 aa13.44□□□□□ -0.26
SF3B3-205ENST00000564899 NIM1KQ8IY84 436 aa13.44□□□□□ -0.26
SF3B3-205ENST00000564899 EDC3Q96F86 508 aaKnown RBP13.44□□□□□ -0.26
SF3B3-205ENST00000564899 FAM84BQ96KN1 310 aaPredicted RBP13.44□□□□□ -0.26
SF3B3-205ENST00000564899 BACH2Q9BYV9 841 aa13.44□□□□□ -0.26
SF3B3-205ENST00000564899 SNRKQ9NRH2 765 aa13.44□□□□□ -0.26
SF3B3-205ENST00000564899 ADARB2Q9NS39 739 aaKnown RBP13.44□□□□□ -0.26
SF3B3-205ENST00000564899 PAG1Q9NWQ8 432 aa13.44□□□□□ -0.26
SF3B3-205ENST00000564899 POLLQ9UGP5 575 aa13.44□□□□□ -0.26
SF3B3-205ENST00000564899 MED23Q9ULK4 1368 aa13.44□□□□□ -0.26
SF3B3-205ENST00000564899 ZAP70P43403 619 aa13.43□□□□□ -0.26
SF3B3-205ENST00000564899 RASGRF1Q13972 1273 aa13.43□□□□□ -0.26
SF3B3-205ENST00000564899 TBC1D9Q6ZT07 1266 aa13.43□□□□□ -0.26
SF3B3-205ENST00000564899 ZNF804AQ7Z570 1209 aa13.43□□□□□ -0.26
SF3B3-205ENST00000564899 TXNRD3Q86VQ6 643 aa13.43□□□□□ -0.26
SF3B3-205ENST00000564899 FSD1Q9BTV5 496 aa13.43□□□□□ -0.26
SF3B3-205ENST00000564899 DUOX1Q9NRD9 1551 aa13.43□□□□□ -0.26
SF3B3-205ENST00000564899 YDJCA8MPS7 323 aa13.42□□□□□ -0.26
SF3B3-205ENST00000564899 RAD17O75943 681 aa13.42□□□□□ -0.26
SF3B3-205ENST00000564899 EGFRP00533 1210 aa13.42□□□□□ -0.26
SF3B3-205ENST00000564899 PI16Q6UXB8 463 aa13.42□□□□□ -0.26
SF3B3-205ENST00000564899 SPATA5Q8NB90 893 aa13.42□□□□□ -0.26
SF3B3-205ENST00000564899 EYA3Q99504 573 aa13.42□□□□□ -0.26
SF3B3-205ENST00000564899 HMG20BQ9P0W2 317 aa13.42□□□□□ -0.26
SF3B3-205ENST00000564899 PCDH10Q9P2E7 1040 aa13.42□□□□□ -0.26
SF3B3-205ENST00000564899 PGAP2Q9UHJ9 254 aa13.42□□□□□ -0.26
SF3B3-205ENST00000564899 HTTP42858 3142 aa13.41□□□□□ -0.26
SF3B3-205ENST00000564899 SEMA3EO15041 775 aa13.41□□□□□ -0.26
SF3B3-205ENST00000564899 FRAT2O75474 233 aaPredicted RBP13.41□□□□□ -0.26
SF3B3-205ENST00000564899 GRIPAP1Q4V328 841 aa13.41□□□□□ -0.26
SF3B3-205ENST00000564899 KBTBD3Q8NAB2 608 aa13.41□□□□□ -0.26
SF3B3-205ENST00000564899 RTFDC1Q9BY42 306 aaPredicted RBP13.41□□□□□ -0.26
SF3B3-205ENST00000564899 DIAPH3Q9NSV4 1193 aa13.41□□□□□ -0.26
SF3B3-205ENST00000564899 DENND2AQ9ULE3 1009 aa13.41□□□□□ -0.26
SF3B3-205ENST00000564899 IQSEC3Q9UPP2 1182 aaPredicted RBP13.41□□□□□ -0.26
SF3B3-205ENST00000564899 RFX7Q2KHR2 1363 aa13.41□□□□□ -0.26
SF3B3-205ENST00000564899 FAM155AB1AL88 458 aaPredicted RBP13.4□□□□□ -0.26
SF3B3-205ENST00000564899 HIP1O00291 1037 aa13.4□□□□□ -0.26
SF3B3-205ENST00000564899 RIMBP2O15034 1052 aa13.4□□□□□ -0.26
SF3B3-205ENST00000564899 CHMLP26374 656 aa13.4□□□□□ -0.26
SF3B3-205ENST00000564899 TTF1Q15361 905 aaPredicted RBP13.4□□□□□ -0.26
SF3B3-205ENST00000564899 SUPT20HQ8NEM7 779 aa13.4□□□□□ -0.26
SF3B3-205ENST00000564899 ZC3H12CQ9C0D7 883 aaKnown RBP13.4□□□□□ -0.26
SF3B3-205ENST00000564899 ANTXR1Q9H6X2 564 aa13.4□□□□□ -0.26
SF3B3-205ENST00000564899 ZNRF3Q9ULT6 936 aa13.4□□□□□ -0.26
SF3B3-205ENST00000564899 COL1A1P02452 1464 aaPredicted RBP13.4□□□□□ -0.26
SF3B3-205ENST00000564899 ZBTB22O15209 634 aa13.39□□□□□ -0.27
SF3B3-205ENST00000564899 CA12O43570 354 aa13.39□□□□□ -0.27
SF3B3-205ENST00000564899 CYP2E1P05181 493 aaPredicted RBP13.39□□□□□ -0.27
SF3B3-205ENST00000564899 WASHC4Q2M389 1173 aa13.39□□□□□ -0.27
SF3B3-205ENST00000564899 USP48Q86UV5 1035 aa13.39□□□□□ -0.27
SF3B3-205ENST00000564899 TDRD7Q8NHU6 1098 aaKnown RBP13.39□□□□□ -0.27
SF3B3-205ENST00000564899 HHIPL1Q96JK4 782 aa13.39□□□□□ -0.27
SF3B3-205ENST00000564899 CD209Q9NNX6 404 aa13.39□□□□□ -0.27
SF3B3-205ENST00000564899 PIH1D3Q9NQM4 214 aaKnown RBP13.39□□□□□ -0.27
SF3B3-205ENST00000564899 ZBTB12Q9Y330 459 aaPredicted RBP13.39□□□□□ -0.27
SF3B3-205ENST00000564899 PDS5AQ29RF7 1337 aaKnown RBP13.39□□□□□ -0.27
SF3B3-205ENST00000564899 POLR2AP24928 1970 aaKnown RBP13.38□□□□□ -0.27
SF3B3-205ENST00000564899 CENPFP49454 3210 aa13.38□□□□□ -0.27
SF3B3-205ENST00000564899 EIF5BO60841 1220 aaKnown RBP13.38□□□□□ -0.27
SF3B3-205ENST00000564899 IL1R1P14778 569 aa13.38□□□□□ -0.27
SF3B3-205ENST00000564899 HUNKP57058 714 aa13.38□□□□□ -0.27
SF3B3-205ENST00000564899 CHAF1AQ13111 956 aaPredicted RBP13.38□□□□□ -0.27
SF3B3-205ENST00000564899 LRRFIP1Q32MZ4 808 aaKnown RBP13.38□□□□□ -0.27
SF3B3-205ENST00000564899 SAMD7Q7Z3H4 446 aa13.38□□□□□ -0.27
SF3B3-205ENST00000564899 COA1Q9GZY4 146 aa13.38□□□□□ -0.27
SF3B3-205ENST00000564899 BRCA2P51587 3418 aa13.38□□□□□ -0.27
SF3B3-205ENST00000564899 ADM5C9JUS6 153 aa13.37□□□□□ -0.27
SF3B3-205ENST00000564899 G3V3G9 751 aa13.37□□□□□ -0.27
SF3B3-205ENST00000564899 IDH1O75874 414 aaKnown RBP13.37□□□□□ -0.27
SF3B3-205ENST00000564899 SEC24BO95487 1268 aa13.37□□□□□ -0.27
SF3B3-205ENST00000564899 MFAP1P55081 439 aaKnown RBP13.37□□□□□ -0.27
SF3B3-205ENST00000564899 KIAA2012Q0VF49 1180 aa13.37□□□□□ -0.27
SF3B3-205ENST00000564899 NMIQ13287 307 aaPredicted RBP13.37□□□□□ -0.27
SF3B3-205ENST00000564899 DCAF8Q5TAQ9 597 aa13.37□□□□□ -0.27
SF3B3-205ENST00000564899 CWC27Q6UX04 472 aaKnown RBP13.37□□□□□ -0.27
SF3B3-205ENST00000564899 TICAM2Q86XR7 235 aa13.37□□□□□ -0.27
SF3B3-205ENST00000564899 MICALL2Q8IY33 904 aa13.37□□□□□ -0.27
SF3B3-205ENST00000564899 RUFY2Q8WXA3 655 aa13.37□□□□□ -0.27
SF3B3-205ENST00000564899 ESYT1Q9BSJ8 1104 aa13.37□□□□□ -0.27
SF3B3-205ENST00000564899 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.37□□□□□ -0.27
SF3B3-205ENST00000564899 CNOT7Q9UIV1 285 aaKnown RBP13.37□□□□□ -0.27
SF3B3-205ENST00000564899 ASTN2O75129 1339 aaPredicted RBP13.37□□□□□ -0.27
SF3B3-205ENST00000564899 ZFYP08048 801 aaPredicted RBP13.36□□□□□ -0.27
SF3B3-205ENST00000564899 NOGQ13253 232 aa13.36□□□□□ -0.27
SF3B3-205ENST00000564899 DOK7Q18PE1 504 aa13.36□□□□□ -0.27
SF3B3-205ENST00000564899 ZSCAN25Q6NSZ9 544 aa13.36□□□□□ -0.27
SF3B3-205ENST00000564899 CDC37L1Q7L3B6 337 aa13.36□□□□□ -0.27
SF3B3-205ENST00000564899 FAM227BQ96M60 508 aa13.36□□□□□ -0.27
SF3B3-205ENST00000564899 UPF2Q9HAU5 1272 aaKnown RBP13.36□□□□□ -0.27
SF3B3-205ENST00000564899 KCNQ5Q9NR82 932 aa13.36□□□□□ -0.27
SF3B3-205ENST00000564899 JAG2Q9Y219 1238 aa13.36□□□□□ -0.27
SF3B3-205ENST00000564899 AKAP11Q9UKA4 1901 aa13.36□□□□□ -0.27
SF3B3-205ENST00000564899 RAD50Q92878 1312 aa13.36□□□□□ -0.27
SF3B3-205ENST00000564899 A0A0D9SFI3 127 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms