RNA–Protein interactions for RNA: ENST00000564844.1

MAP1LC3B-206, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 3,085 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-206ENST00000564844 RFX5P48382 616 aaPredicted RBP23.65■■□□□ 1.38
MAP1LC3B-206ENST00000564844 ANO1Q5XXA6 986 aa23.65■■□□□ 1.38
MAP1LC3B-206ENST00000564844 PPP2R2CQ9Y2T4 447 aa23.65■■□□□ 1.38
MAP1LC3B-206ENST00000564844 MAST3O60307 1309 aa23.64■■□□□ 1.38
MAP1LC3B-206ENST00000564844 VWA3AA6NCI4 1184 aa23.64■■□□□ 1.38
MAP1LC3B-206ENST00000564844 LRRC24Q50LG9 513 aa23.64■■□□□ 1.38
MAP1LC3B-206ENST00000564844 LZTFL1Q9NQ48 299 aa23.64■■□□□ 1.38
MAP1LC3B-206ENST00000564844 NALCNQ8IZF0 1738 aa23.64■■□□□ 1.38
MAP1LC3B-206ENST00000564844 PXDNQ92626 1479 aa23.64■■□□□ 1.38
MAP1LC3B-206ENST00000564844 CDC27P30260 824 aa23.64■■□□□ 1.37
MAP1LC3B-206ENST00000564844 KCNG4Q8TDN1 519 aa23.64■■□□□ 1.37
MAP1LC3B-206ENST00000564844 OSBP2Q969R2 916 aa23.64■■□□□ 1.37
MAP1LC3B-206ENST00000564844 ZNF496Q96IT1 587 aaPredicted RBP23.64■■□□□ 1.37
MAP1LC3B-206ENST00000564844 PRC1O43663 620 aa23.63■■□□□ 1.37
MAP1LC3B-206ENST00000564844 IFIT1P09914 478 aaKnown RBP23.63■■□□□ 1.37
MAP1LC3B-206ENST00000564844 CSB-PGBD3P0DP91 1061 aa23.63■■□□□ 1.37
MAP1LC3B-206ENST00000564844 PDE4BQ07343 736 aa23.63■■□□□ 1.37
MAP1LC3B-206ENST00000564844 FBXO18Q8NFZ0 1043 aa23.63■■□□□ 1.37
MAP1LC3B-206ENST00000564844 ANKRD24Q8TF21 1146 aa23.63■■□□□ 1.37
MAP1LC3B-206ENST00000564844 DDX17Q92841 729 aaKnown RBP23.63■■□□□ 1.37
MAP1LC3B-206ENST00000564844 PARD6BQ9BYG5 372 aa23.63■■□□□ 1.37
MAP1LC3B-206ENST00000564844 COPRSQ9NQ92 184 aa23.63■■□□□ 1.37
MAP1LC3B-206ENST00000564844 AXIN2Q9Y2T1 843 aa23.63■■□□□ 1.37
MAP1LC3B-206ENST00000564844 CCDC82Q8N4S0 544 aa23.63■■□□□ 1.37
MAP1LC3B-206ENST00000564844 ANKRD65E5RJM6 399 aa23.63■■□□□ 1.37
MAP1LC3B-206ENST00000564844 TNNT3P45378 269 aaPredicted RBP23.63■■□□□ 1.37
MAP1LC3B-206ENST00000564844 PPP2R3AQ06190 1150 aa23.63■■□□□ 1.37
MAP1LC3B-206ENST00000564844 AXDND1Q5T1B0 1012 aaPredicted RBP23.63■■□□□ 1.37
MAP1LC3B-206ENST00000564844 PI16Q6UXB8 463 aa23.63■■□□□ 1.37
MAP1LC3B-206ENST00000564844 CCDC191Q8NCU4 936 aa23.63■■□□□ 1.37
MAP1LC3B-206ENST00000564844 DHX58Q96C10 678 aa23.63■■□□□ 1.37
MAP1LC3B-206ENST00000564844 METTL22Q9BUU2 404 aaPredicted RBP23.63■■□□□ 1.37
MAP1LC3B-206ENST00000564844 LRRC37A3O60309 1634 aa23.63■■□□□ 1.37
MAP1LC3B-206ENST00000564844 SALL1Q9NSC2 1324 aa23.62■■□□□ 1.37
MAP1LC3B-206ENST00000564844 CC2D1AQ6P1N0 951 aaPredicted RBP23.62■■□□□ 1.37
MAP1LC3B-206ENST00000564844 MYL10Q9BUA6 226 aa23.62■■□□□ 1.37
MAP1LC3B-206ENST00000564844 SUGCTQ9HAC7 445 aa23.62■■□□□ 1.37
MAP1LC3B-206ENST00000564844 PIK3C2AO00443 1686 aa23.62■■□□□ 1.37
MAP1LC3B-206ENST00000564844 PHACTR2O75167 634 aa23.62■■□□□ 1.37
MAP1LC3B-206ENST00000564844 LRRFIP1Q32MZ4 808 aaKnown RBP23.62■■□□□ 1.37
MAP1LC3B-206ENST00000564844 ZNF790Q6PG37 636 aa23.62■■□□□ 1.37
MAP1LC3B-206ENST00000564844 GRAMD1CQ8IYS0 662 aa23.62■■□□□ 1.37
MAP1LC3B-206ENST00000564844 NKX2-3Q8TAU0 364 aa23.62■■□□□ 1.37
MAP1LC3B-206ENST00000564844 CCDC12Q8WUD4 166 aaPredicted RBP23.61■■□□□ 1.37
MAP1LC3B-206ENST00000564844 PUS3Q9BZE2 481 aaKnown RBP23.61■■□□□ 1.37
MAP1LC3B-206ENST00000564844 FEZ2Q9UHY8 353 aaPredicted RBP23.61■■□□□ 1.37
MAP1LC3B-206ENST00000564844 MYL5Q02045 173 aa23.61■■□□□ 1.37
MAP1LC3B-206ENST00000564844 LONRF3Q496Y0 759 aa23.61■■□□□ 1.37
MAP1LC3B-206ENST00000564844 FOXP4Q8IVH2 680 aaPredicted RBP23.61■■□□□ 1.37
MAP1LC3B-206ENST00000564844 A0A1W2PQ27 194 aa23.61■■□□□ 1.37
MAP1LC3B-206ENST00000564844 A0A1W2PQ64 194 aa23.61■■□□□ 1.37
MAP1LC3B-206ENST00000564844 A0A1W2PQD8 194 aa23.61■■□□□ 1.37
MAP1LC3B-206ENST00000564844 JCADQ9P266 1359 aa23.6■■□□□ 1.37
MAP1LC3B-206ENST00000564844 COBLO75128 1261 aa23.6■■□□□ 1.37
MAP1LC3B-206ENST00000564844 ZSCAN26Q16670 478 aa23.6■■□□□ 1.37
MAP1LC3B-206ENST00000564844 SHC4Q6S5L8 630 aa23.6■■□□□ 1.37
MAP1LC3B-206ENST00000564844 CREBRFQ8IUR6 639 aa23.6■■□□□ 1.37
MAP1LC3B-206ENST00000564844 ZNF274Q96GC6 653 aaPredicted RBP23.6■■□□□ 1.37
MAP1LC3B-206ENST00000564844 BAG1Q99933 345 aaPredicted RBP23.6■■□□□ 1.37
MAP1LC3B-206ENST00000564844 ARFGAP3Q9NP61 516 aa23.6■■□□□ 1.37
MAP1LC3B-206ENST00000564844 PCDHA5Q9Y5H7 936 aa23.6■■□□□ 1.37
MAP1LC3B-206ENST00000564844 EFCAB8A8MWE9 144 aa23.59■■□□□ 1.37
MAP1LC3B-206ENST00000564844 INCENPQ9NQS7 918 aa23.59■■□□□ 1.37
MAP1LC3B-206ENST00000564844 INTS13Q9NVM9 706 aa23.59■■□□□ 1.37
MAP1LC3B-206ENST00000564844 UTYO14607 1347 aa23.59■■□□□ 1.37
MAP1LC3B-206ENST00000564844 PHLPP2Q6ZVD8 1323 aa23.59■■□□□ 1.37
MAP1LC3B-206ENST00000564844 OLFM4Q6UX06 510 aa23.58■■□□□ 1.37
MAP1LC3B-206ENST00000564844 MICU3Q86XE3 530 aa23.58■■□□□ 1.37
MAP1LC3B-206ENST00000564844 CNNM3Q8NE01 707 aa23.58■■□□□ 1.37
MAP1LC3B-206ENST00000564844 CABLES1Q8TDN4 633 aa23.58■■□□□ 1.37
MAP1LC3B-206ENST00000564844 SENP2Q9HC62 589 aa23.58■■□□□ 1.37
MAP1LC3B-206ENST00000564844 H3BQF6 201 aa23.58■■□□□ 1.37
MAP1LC3B-206ENST00000564844 FGAP02671 866 aa23.58■■□□□ 1.37
MAP1LC3B-206ENST00000564844 KIF23Q02241 960 aaPredicted RBP23.58■■□□□ 1.37
MAP1LC3B-206ENST00000564844 CHD2O14647 1828 aaKnown RBP23.58■■□□□ 1.36
MAP1LC3B-206ENST00000564844 GCP02774 474 aa23.58■■□□□ 1.36
MAP1LC3B-206ENST00000564844 ZMYM1Q5SVZ6 1142 aa23.58■■□□□ 1.36
MAP1LC3B-206ENST00000564844 VSTM4Q8IW00 320 aa23.58■■□□□ 1.36
MAP1LC3B-206ENST00000564844 KCND1Q9NSA2 647 aa23.58■■□□□ 1.36
MAP1LC3B-206ENST00000564844 RNF216Q9NWF9 866 aaPredicted RBP23.58■■□□□ 1.36
MAP1LC3B-206ENST00000564844 HPS5Q9UPZ3 1129 aa23.58■■□□□ 1.36
MAP1LC3B-206ENST00000564844 TULP2O00295 520 aa23.57■■□□□ 1.36
MAP1LC3B-206ENST00000564844 RALYLQ86SE5 291 aaKnown RBP23.57■■□□□ 1.36
MAP1LC3B-206ENST00000564844 ALG1Q9BT22 464 aa23.57■■□□□ 1.36
MAP1LC3B-206ENST00000564844 POLR3EQ9NVU0 708 aa23.57■■□□□ 1.36
MAP1LC3B-206ENST00000564844 N4BP1O75113 896 aaKnown RBP23.57■■□□□ 1.36
MAP1LC3B-206ENST00000564844 CHRNA2Q15822 529 aa23.57■■□□□ 1.36
MAP1LC3B-206ENST00000564844 KLHL10Q6JEL2 608 aa23.57■■□□□ 1.36
MAP1LC3B-206ENST00000564844 PLEKHA4Q9H4M7 779 aa23.57■■□□□ 1.36
MAP1LC3B-206ENST00000564844 VPS18Q9P253 973 aa23.57■■□□□ 1.36
MAP1LC3B-206ENST00000564844 APPP05067 770 aa23.56■■□□□ 1.36
MAP1LC3B-206ENST00000564844 BMP6P22004 513 aa23.56■■□□□ 1.36
MAP1LC3B-206ENST00000564844 CMA1P23946 247 aa23.56■■□□□ 1.36
MAP1LC3B-206ENST00000564844 ATL3Q6DD88 541 aa23.56■■□□□ 1.36
MAP1LC3B-206ENST00000564844 VPS37DQ86XT2 251 aa23.56■■□□□ 1.36
MAP1LC3B-206ENST00000564844 DSCC1Q9BVC3 393 aa23.56■■□□□ 1.36
MAP1LC3B-206ENST00000564844 RNF113AO15541 343 aaKnown RBP23.56■■□□□ 1.36
MAP1LC3B-206ENST00000564844 ZSCAN12O43309 604 aa23.56■■□□□ 1.36
MAP1LC3B-206ENST00000564844 YEATS4O95619 227 aa23.56■■□□□ 1.36
MAP1LC3B-206ENST00000564844 GRIN1Q05586 938 aa23.56■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms