RNA–Protein interactions for RNA: ENST00000564744.1

RPL4-208, Transcript of ribosomal protein L4, human

TSL 2

Gene RPL4, Length 671 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RPL4-208	ENST00000564744	POTEI	P0CG38	1075 aa		10.37	□□□□□ -0.75
RPL4-208	ENST00000564744	POTEJ	P0CG39	1038 aa		10.37	□□□□□ -0.75
RPL4-208	ENST00000564744	RPS12	P25398	132 aa	Known RBP	10.37	□□□□□ -0.75
RPL4-208	ENST00000564744	EPHX2	P34913	555 aa		10.37	□□□□□ -0.75
RPL4-208	ENST00000564744	CENPQ	Q7L2Z9	268 aa	Predicted RBP	10.37	□□□□□ -0.75
RPL4-208	ENST00000564744	AGBL3	Q8NEM8	1001 aa		10.37	□□□□□ -0.75
RPL4-208	ENST00000564744	TBC1D22A	Q8WUA7	517 aa		10.37	□□□□□ -0.75
RPL4-208	ENST00000564744	GPATCH3	Q96I76	525 aa		10.37	□□□□□ -0.75
RPL4-208	ENST00000564744	CDK5RAP2	Q96SN8	1893 aa		10.37	□□□□□ -0.75
RPL4-208	ENST00000564744	TAF1D	Q9H5J8	278 aa	Predicted RBP	10.37	□□□□□ -0.75
RPL4-208	ENST00000564744	ECHDC1	Q9NTX5	307 aa		10.37	□□□□□ -0.75
RPL4-208	ENST00000564744	ASTN2	O75129	1339 aa	Predicted RBP	10.36	□□□□□ -0.75
RPL4-208	ENST00000564744	AOX1	Q06278	1338 aa		10.36	□□□□□ -0.75
RPL4-208	ENST00000564744	LDHB	P07195	334 aa	Known RBP	10.36	□□□□□ -0.75
RPL4-208	ENST00000564744	ATP5J	P18859	108 aa		10.36	□□□□□ -0.75
RPL4-208	ENST00000564744	RBM5	P52756	815 aa	Known RBP eCLIP	10.36	□□□□□ -0.75
RPL4-208	ENST00000564744	DIXDC1	Q155Q3	683 aa		10.36	□□□□□ -0.75
RPL4-208	ENST00000564744	KIF4B	Q2VIQ3	1234 aa		10.36	□□□□□ -0.75
RPL4-208	ENST00000564744	CFAP100	Q494V2	611 aa		10.36	□□□□□ -0.75
RPL4-208	ENST00000564744	ERICH6	Q7L0X2	663 aa		10.36	□□□□□ -0.75
RPL4-208	ENST00000564744	DPF2	Q92785	391 aa		10.36	□□□□□ -0.75
RPL4-208	ENST00000564744	ZNF512B	Q96KM6	892 aa	Predicted RBP	10.36	□□□□□ -0.75
RPL4-208	ENST00000564744	RAI14	Q9P0K7	980 aa		10.36	□□□□□ -0.75
RPL4-208	ENST00000564744	PDS5A	Q29RF7	1337 aa	Known RBP	10.35	□□□□□ -0.75
RPL4-208	ENST00000564744	SALL1	Q9NSC2	1324 aa		10.35	□□□□□ -0.75
RPL4-208	ENST00000564744	IQCA1L	A6NCM1	817 aa		10.35	□□□□□ -0.75
RPL4-208	ENST00000564744	KIF3C	O14782	793 aa		10.35	□□□□□ -0.75
RPL4-208	ENST00000564744	IDH1	O75874	414 aa	Known RBP	10.35	□□□□□ -0.75
RPL4-208	ENST00000564744	VEGFA	P15692	232 aa	Predicted RBP	10.35	□□□□□ -0.75
RPL4-208	ENST00000564744	PDE1A	P54750	535 aa		10.35	□□□□□ -0.75
RPL4-208	ENST00000564744	FKBP1A	P62942	108 aa	Known RBP	10.35	□□□□□ -0.75
RPL4-208	ENST00000564744	ERICH6B	Q5W0A0	696 aa		10.35	□□□□□ -0.75
RPL4-208	ENST00000564744	DZIP1	Q86YF9	867 aa	Known RBP	10.35	□□□□□ -0.75
RPL4-208	ENST00000564744	PLEKHM2	Q8IWE5	1019 aa		10.35	□□□□□ -0.75
RPL4-208	ENST00000564744	PI4K2B	Q8TCG2	481 aa		10.35	□□□□□ -0.75
RPL4-208	ENST00000564744	HAUS7	Q99871	368 aa		10.35	□□□□□ -0.75
RPL4-208	ENST00000564744	MYOZ2	Q9NPC6	264 aa		10.35	□□□□□ -0.75
RPL4-208	ENST00000564744	ADARB2	Q9NS39	739 aa	Known RBP	10.35	□□□□□ -0.75
RPL4-208	ENST00000564744	PAG1	Q9NWQ8	432 aa		10.35	□□□□□ -0.75
RPL4-208	ENST00000564744	LRP2BP	Q9P2M1	347 aa		10.35	□□□□□ -0.75
RPL4-208	ENST00000564744	HDAC9	Q9UKV0	1011 aa		10.35	□□□□□ -0.75
RPL4-208	ENST00000564744	SCAF8	Q9UPN6	1271 aa	Known RBP	10.35	□□□□□ -0.75
RPL4-208	ENST00000564744	CLEC11A	Q9Y240	323 aa		10.35	□□□□□ -0.75
RPL4-208	ENST00000564744	TTC41P	Q6P2S7	1318 aa		10.34	□□□□□ -0.75
RPL4-208	ENST00000564744	CHGB	P05060	677 aa		10.34	□□□□□ -0.75
RPL4-208	ENST00000564744	CRK	P46108	304 aa		10.34	□□□□□ -0.75
RPL4-208	ENST00000564744	HIRA	P54198	1017 aa	Predicted RBP	10.34	□□□□□ -0.75
RPL4-208	ENST00000564744	ZNF280A	P59817	542 aa	Predicted RBP	10.34	□□□□□ -0.75
RPL4-208	ENST00000564744	MECOM	Q03112	1051 aa		10.34	□□□□□ -0.75
RPL4-208	ENST00000564744	NBPF9	Q3BBW0	867 aa		10.34	□□□□□ -0.75
RPL4-208	ENST00000564744	SLFNL1	Q499Z3	407 aa		10.34	□□□□□ -0.75
RPL4-208	ENST00000564744	OGFOD1	Q8N543	542 aa		10.34	□□□□□ -0.75
RPL4-208	ENST00000564744	ZGPAT	Q8N5A5	531 aa	Known RBP	10.34	□□□□□ -0.75
RPL4-208	ENST00000564744	ZNF384	Q8TF68	577 aa		10.34	□□□□□ -0.75
RPL4-208	ENST00000564744	PPIL4	Q8WUA2	492 aa	Known RBP eCLIP	10.34	□□□□□ -0.75
RPL4-208	ENST00000564744	CLRN2	A0PK11	232 aa		10.33	□□□□□ -0.76
RPL4-208	ENST00000564744	ERC2	O15083	957 aa		10.33	□□□□□ -0.76
RPL4-208	ENST00000564744	GLRX3	O76003	335 aa	Known RBP	10.33	□□□□□ -0.76
RPL4-208	ENST00000564744	RGS3	P49796	1198 aa		10.33	□□□□□ -0.76
RPL4-208	ENST00000564744	DLGAP5	Q15398	846 aa		10.33	□□□□□ -0.76
RPL4-208	ENST00000564744	SPTY2D1	Q68D10	685 aa	Predicted RBP	10.33	□□□□□ -0.76
RPL4-208	ENST00000564744	MAGEB6	Q8N7X4	407 aa		10.33	□□□□□ -0.76
RPL4-208	ENST00000564744	TEKT1	Q969V4	418 aa		10.33	□□□□□ -0.76
RPL4-208	ENST00000564744	STAP2	Q9UGK3	403 aa		10.33	□□□□□ -0.76
RPL4-208	ENST00000564744	DAGLA	Q9Y4D2	1042 aa		10.33	□□□□□ -0.76
RPL4-208	ENST00000564744	FOCAD	Q5VW36	1801 aa		10.33	□□□□□ -0.76
RPL4-208	ENST00000564744	MAST3	O60307	1309 aa		10.33	□□□□□ -0.76
RPL4-208	ENST00000564744	ZBTB22	O15209	634 aa		10.32	□□□□□ -0.76
RPL4-208	ENST00000564744	CACNB3	P54284	484 aa		10.32	□□□□□ -0.76
RPL4-208	ENST00000564744	NAA16	Q6N069	864 aa	Predicted RBP	10.32	□□□□□ -0.76
RPL4-208	ENST00000564744	DLK2	Q6UY11	383 aa		10.32	□□□□□ -0.76
RPL4-208	ENST00000564744	USP50	Q70EL3	339 aa	Predicted RBP	10.32	□□□□□ -0.76
RPL4-208	ENST00000564744	ADGRA1	Q86SQ6	560 aa		10.32	□□□□□ -0.76
RPL4-208	ENST00000564744	NSUN4	Q96CB9	384 aa	Known RBP	10.32	□□□□□ -0.76
RPL4-208	ENST00000564744	PRMT6	Q96LA8	375 aa	Predicted RBP	10.32	□□□□□ -0.76
RPL4-208	ENST00000564744	TDRD3	Q9H7E2	651 aa	Known RBP	10.32	□□□□□ -0.76
RPL4-208	ENST00000564744	GGA3	Q9NZ52	723 aa		10.32	□□□□□ -0.76
RPL4-208	ENST00000564744	SUGT1	Q9Y2Z0	365 aa		10.32	□□□□□ -0.76
RPL4-208	ENST00000564744	NAV1	Q8NEY1	1877 aa		10.32	□□□□□ -0.76
RPL4-208	ENST00000564744	TRPM7	Q96QT4	1865 aa		10.32	□□□□□ -0.76
RPL4-208	ENST00000564744	MROH7-TTC4	A0A0A0MT08	1334 aa		10.32	□□□□□ -0.76
RPL4-208	ENST00000564744	MYH1	P12882	1939 aa		10.31	□□□□□ -0.76
RPL4-208	ENST00000564744	SPDYE2B	A6NHP3	402 aa		10.31	□□□□□ -0.76
RPL4-208	ENST00000564744	TRIM6-TRIM34	B2RNG4	842 aa		10.31	□□□□□ -0.76
RPL4-208	ENST00000564744	WNT10B	O00744	389 aa		10.31	□□□□□ -0.76
RPL4-208	ENST00000564744	SPDYE6	P0CI01	402 aa		10.31	□□□□□ -0.76
RPL4-208	ENST00000564744	PDE6A	P16499	860 aa		10.31	□□□□□ -0.76
RPL4-208	ENST00000564744	CYP7A1	P22680	504 aa		10.31	□□□□□ -0.76
RPL4-208	ENST00000564744	BTD	P43251	543 aa		10.31	□□□□□ -0.76
RPL4-208	ENST00000564744	DYNLL1	P63167	89 aa	Known RBP	10.31	□□□□□ -0.76
RPL4-208	ENST00000564744	MAP3K12	Q12852	859 aa		10.31	□□□□□ -0.76
RPL4-208	ENST00000564744	TTF1	Q15361	905 aa	Predicted RBP	10.31	□□□□□ -0.76
RPL4-208	ENST00000564744	ANGEL2	Q5VTE6	544 aa	Known RBP	10.31	□□□□□ -0.76
RPL4-208	ENST00000564744	MAP1S	Q66K74	1059 aa	Predicted RBP	10.31	□□□□□ -0.76
RPL4-208	ENST00000564744	MIGA1	Q8NAN2	632 aa		10.31	□□□□□ -0.76
RPL4-208	ENST00000564744	RILPL2	Q969X0	211 aa		10.31	□□□□□ -0.76
RPL4-208	ENST00000564744	ZBED3	Q96IU2	234 aa	Predicted RBP	10.31	□□□□□ -0.76
RPL4-208	ENST00000564744	FSD1	Q9BTV5	496 aa		10.31	□□□□□ -0.76
RPL4-208	ENST00000564744	VEZT	Q9HBM0	779 aa		10.31	□□□□□ -0.76
RPL4-208	ENST00000564744	SERPINA10	Q9UK55	444 aa		10.31	□□□□□ -0.76

Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms