RNA–Protein interactions for RNA: ENST00000564676.5

CDH1-206, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 969 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-206ENST00000564676 PITPNM2Q9BZ72 1349 aa12.25□□□□□ -0.45
CDH1-206ENST00000564676 SEMA3EO15041 775 aa12.24□□□□□ -0.45
CDH1-206ENST00000564676 GRIK5Q16478 980 aa12.24□□□□□ -0.45
CDH1-206ENST00000564676 DEFB115Q30KQ5 88 aa12.24□□□□□ -0.45
CDH1-206ENST00000564676 HSP90AB4PQ58FF6 505 aa12.24□□□□□ -0.45
CDH1-206ENST00000564676 ERC1Q8IUD2 1116 aa12.24□□□□□ -0.45
CDH1-206ENST00000564676 MTMR14Q8NCE2 650 aa12.24□□□□□ -0.45
CDH1-206ENST00000564676 CDCA5Q96FF9 252 aa12.24□□□□□ -0.45
CDH1-206ENST00000564676 ZBED3Q96IU2 234 aaPredicted RBP12.24□□□□□ -0.45
CDH1-206ENST00000564676 PRMT6Q96LA8 375 aaPredicted RBP12.24□□□□□ -0.45
CDH1-206ENST00000564676 GPR108Q9NPR9 543 aa12.24□□□□□ -0.45
CDH1-206ENST00000564676 SERPINA10Q9UK55 444 aa12.24□□□□□ -0.45
CDH1-206ENST00000564676 EXOC6BQ9Y2D4 811 aa12.24□□□□□ -0.45
CDH1-206ENST00000564676 SUGT1Q9Y2Z0 365 aa12.24□□□□□ -0.45
CDH1-206ENST00000564676 PCDHAC2Q9Y5I4 1007 aa12.24□□□□□ -0.45
CDH1-206ENST00000564676 MYH13Q9UKX3 1938 aa12.23□□□□□ -0.45
CDH1-206ENST00000564676 MAST3O60307 1309 aa12.23□□□□□ -0.45
CDH1-206ENST00000564676 CLRN2A0PK11 232 aa12.23□□□□□ -0.45
CDH1-206ENST00000564676 CRKP46108 304 aa12.23□□□□□ -0.45
CDH1-206ENST00000564676 TNNI3KQ59H18 835 aa12.23□□□□□ -0.45
CDH1-206ENST00000564676 PAXIP1Q6ZW49 1069 aaPredicted RBP12.23□□□□□ -0.45
CDH1-206ENST00000564676 APOBEC3FQ8IUX4 373 aaKnown RBP12.23□□□□□ -0.45
CDH1-206ENST00000564676 VEZTQ9HBM0 779 aa12.23□□□□□ -0.45
CDH1-206ENST00000564676 FPGT-TNNI3KV9GXZ4 949 aa12.23□□□□□ -0.45
CDH1-206ENST00000564676 CNTNAP1P78357 1384 aa12.22□□□□□ -0.45
CDH1-206ENST00000564676 APBB1O00213 710 aa12.22□□□□□ -0.45
CDH1-206ENST00000564676 LDHBP07195 334 aaKnown RBP12.22□□□□□ -0.45
CDH1-206ENST00000564676 HDLBPQ00341 1268 aaKnown RBP12.22□□□□□ -0.45
CDH1-206ENST00000564676 RASGRF1Q13972 1273 aa12.22□□□□□ -0.45
CDH1-206ENST00000564676 CCDC158Q5M9N0 1113 aa12.22□□□□□ -0.45
CDH1-206ENST00000564676 PRAMEF18Q5VWM3 479 aa12.22□□□□□ -0.45
CDH1-206ENST00000564676 SIRT2Q8IXJ6 389 aa12.22□□□□□ -0.45
CDH1-206ENST00000564676 ZGPATQ8N5A5 531 aaKnown RBP12.22□□□□□ -0.45
CDH1-206ENST00000564676 C2orf69Q8N8R5 385 aa12.22□□□□□ -0.45
CDH1-206ENST00000564676 TEKT1Q969V4 418 aa12.22□□□□□ -0.45
CDH1-206ENST00000564676 GBA2Q9HCG7 927 aaPredicted RBP12.22□□□□□ -0.45
CDH1-206ENST00000564676 TLL2Q9Y6L7 1015 aa12.22□□□□□ -0.45
CDH1-206ENST00000564676 RASSF10A6NK89 507 aa12.21□□□□□ -0.45
CDH1-206ENST00000564676 UQCRFS1P1P0C7P4 283 aa12.21□□□□□ -0.45
CDH1-206ENST00000564676 NF2P35240 595 aa12.21□□□□□ -0.45
CDH1-206ENST00000564676 GRM1Q13255 1194 aa12.21□□□□□ -0.45
CDH1-206ENST00000564676 TTC39AQ5SRH9 613 aa12.21□□□□□ -0.45
CDH1-206ENST00000564676 DBNDD2Q9BQY9 259 aa12.21□□□□□ -0.45
CDH1-206ENST00000564676 MRIQ9BWK5 157 aa12.21□□□□□ -0.45
CDH1-206ENST00000564676 CCDC8Q9H0W5 538 aaPredicted RBP12.21□□□□□ -0.45
CDH1-206ENST00000564676 TDRD3Q9H7E2 651 aaKnown RBP12.21□□□□□ -0.45
CDH1-206ENST00000564676 ABCF2Q9UG63 623 aa12.21□□□□□ -0.45
CDH1-206ENST00000564676 SSUH2Q9Y2M2 353 aa12.21□□□□□ -0.45
CDH1-206ENST00000564676 COL1A1P02452 1464 aaPredicted RBP12.21□□□□□ -0.46
CDH1-206ENST00000564676 ARAP2Q8WZ64 1704 aa12.2□□□□□ -0.46
CDH1-206ENST00000564676 SALL1Q9NSC2 1324 aa12.2□□□□□ -0.46
CDH1-206ENST00000564676 RAB11FIP3O75154 756 aa12.2□□□□□ -0.46
CDH1-206ENST00000564676 PRDX5P30044 214 aa12.2□□□□□ -0.46
CDH1-206ENST00000564676 ECE1P42892 770 aa12.2□□□□□ -0.46
CDH1-206ENST00000564676 VEGFBP49765 207 aa12.2□□□□□ -0.46
CDH1-206ENST00000564676 HUNKP57058 714 aa12.2□□□□□ -0.46
CDH1-206ENST00000564676 TTLL12Q14166 644 aaPredicted RBP12.2□□□□□ -0.46
CDH1-206ENST00000564676 SPTY2D1Q68D10 685 aaPredicted RBP12.2□□□□□ -0.46
CDH1-206ENST00000564676 SAPCD2Q86UD0 394 aa12.2□□□□□ -0.46
CDH1-206ENST00000564676 AACSQ86V21 672 aa12.2□□□□□ -0.46
CDH1-206ENST00000564676 SPATA5Q8NB90 893 aa12.2□□□□□ -0.46
CDH1-206ENST00000564676 RHPN1Q8TCX5 695 aa12.2□□□□□ -0.46
CDH1-206ENST00000564676 EAF2Q96CJ1 260 aaPredicted RBP12.2□□□□□ -0.46
CDH1-206ENST00000564676 KIF1BPQ96EK5 621 aa12.2□□□□□ -0.46
CDH1-206ENST00000564676 ZDHHC15Q96MV8 337 aa12.2□□□□□ -0.46
CDH1-206ENST00000564676 BCL11AQ9H165 835 aa12.2□□□□□ -0.46
CDH1-206ENST00000564676 DEFB129Q9H1M3 183 aa12.2□□□□□ -0.46
CDH1-206ENST00000564676 IL1RAPL2Q9NP60 686 aa12.2□□□□□ -0.46
CDH1-206ENST00000564676 ZNF70Q9UC06 446 aaPredicted RBP12.2□□□□□ -0.46
CDH1-206ENST00000564676 AOX1Q06278 1338 aa12.19□□□□□ -0.46
CDH1-206ENST00000564676 PDS5AQ29RF7 1337 aaKnown RBP12.19□□□□□ -0.46
CDH1-206ENST00000564676 ARID4AP29374 1257 aaPredicted RBP12.19□□□□□ -0.46
CDH1-206ENST00000564676 TNFAIP1Q13829 316 aa12.19□□□□□ -0.46
CDH1-206ENST00000564676 CYP4F22Q6NT55 531 aa12.19□□□□□ -0.46
CDH1-206ENST00000564676 HHIPL2Q6UWX4 724 aa12.19□□□□□ -0.46
CDH1-206ENST00000564676 ERICH6Q7L0X2 663 aa12.19□□□□□ -0.46
CDH1-206ENST00000564676 DZIP1Q86YF9 867 aaKnown RBP12.19□□□□□ -0.46
CDH1-206ENST00000564676 CLASRPQ8N2M8 674 aaKnown RBP12.19□□□□□ -0.46
CDH1-206ENST00000564676 JMYQ8N9B5 988 aa12.19□□□□□ -0.46
CDH1-206ENST00000564676 CAPNS2Q96L46 248 aa12.19□□□□□ -0.46
CDH1-206ENST00000564676 CRBNQ96SW2 442 aa12.19□□□□□ -0.46
CDH1-206ENST00000564676 TMOD2Q9NZR1 351 aa12.19□□□□□ -0.46
CDH1-206ENST00000564676 HMG20BQ9P0W2 317 aa12.19□□□□□ -0.46
CDH1-206ENST00000564676 CEP350Q5VT06 3117 aa12.18□□□□□ -0.46
CDH1-206ENST00000564676 WDR33Q9C0J8 1336 aaKnown RBP12.18□□□□□ -0.46
CDH1-206ENST00000564676 TCP10L2B9ZVM9 353 aa12.18□□□□□ -0.46
CDH1-206ENST00000564676 MCAMP43121 646 aa12.18□□□□□ -0.46
CDH1-206ENST00000564676 TNNI2P48788 182 aa12.18□□□□□ -0.46
CDH1-206ENST00000564676 RASA3Q14644 834 aa12.18□□□□□ -0.46
CDH1-206ENST00000564676 DIXDC1Q155Q3 683 aa12.18□□□□□ -0.46
CDH1-206ENST00000564676 APOBEC3HQ6NTF7 200 aaKnown RBP12.18□□□□□ -0.46
CDH1-206ENST00000564676 PI16Q6UXB8 463 aa12.18□□□□□ -0.46
CDH1-206ENST00000564676 SLF2Q8IX21 1173 aa12.18□□□□□ -0.46
CDH1-206ENST00000564676 SPDYE1Q8NFV5 336 aaPredicted RBP12.18□□□□□ -0.46
CDH1-206ENST00000564676 HHIPL1Q96JK4 782 aa12.18□□□□□ -0.46
CDH1-206ENST00000564676 SNRKQ9NRH2 765 aa12.18□□□□□ -0.46
CDH1-206ENST00000564676 DBNLQ9UJU6 430 aaKnown RBP12.18□□□□□ -0.46
CDH1-206ENST00000564676 DAGLAQ9Y4D2 1042 aa12.18□□□□□ -0.46
CDH1-206ENST00000564676 PPP2R3BQ9Y5P8 575 aa12.18□□□□□ -0.46
CDH1-206ENST00000564676 ECM29Q5VYK3 1845 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms