RNA–Protein interactions for RNA: ENST00000564542.5

CDR2-204, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 5

Gene CDR2, Length 1,056 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-204ENST00000564542 ELP3Q9H9T3 547 aa17.79■□□□□ 0.44
CDR2-204ENST00000564542 RIPOR2Q9Y4F9 1068 aa17.79■□□□□ 0.44
CDR2-204ENST00000564542 NBPF7P0C2Y1 421 aaPredicted RBP17.78■□□□□ 0.44
CDR2-204ENST00000564542 CRKP46108 304 aa17.78■□□□□ 0.44
CDR2-204ENST00000564542 TNNI2P48788 182 aa17.78■□□□□ 0.44
CDR2-204ENST00000564542 CDAN1Q8IWY9 1227 aa17.78■□□□□ 0.44
CDR2-204ENST00000564542 CD99L2Q8TCZ2 262 aa17.78■□□□□ 0.44
CDR2-204ENST00000564542 RABL6Q3YEC7 729 aaPredicted RBP17.77■□□□□ 0.44
CDR2-204ENST00000564542 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.77■□□□□ 0.44
CDR2-204ENST00000564542 VPS37DQ86XT2 251 aa17.77■□□□□ 0.44
CDR2-204ENST00000564542 MS4A4AQ96JQ5 239 aa17.77■□□□□ 0.44
CDR2-204ENST00000564542 BICC1Q9H694 974 aaKnown RBP17.77■□□□□ 0.44
CDR2-204ENST00000564542 PTPN22Q9Y2R2 807 aa17.77■□□□□ 0.44
CDR2-204ENST00000564542 MKI67P46013 3256 aaKnown RBP17.76■□□□□ 0.43
CDR2-204ENST00000564542 TCP10L2B9ZVM9 353 aa17.76■□□□□ 0.43
CDR2-204ENST00000564542 HDLBPQ00341 1268 aaKnown RBP17.76■□□□□ 0.43
CDR2-204ENST00000564542 SP3Q02447 781 aa17.76■□□□□ 0.43
CDR2-204ENST00000564542 VGLL4Q14135 290 aa17.76■□□□□ 0.43
CDR2-204ENST00000564542 FBXO33Q7Z6M2 555 aa17.76■□□□□ 0.43
CDR2-204ENST00000564542 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.76■□□□□ 0.43
CDR2-204ENST00000564542 TBC1D22AQ8WUA7 517 aa17.76■□□□□ 0.43
CDR2-204ENST00000564542 TMEM39BQ9GZU3 492 aa17.76■□□□□ 0.43
CDR2-204ENST00000564542 GRIK5Q16478 980 aa17.75■□□□□ 0.43
CDR2-204ENST00000564542 CAVIN4Q5BKX8 364 aa17.75■□□□□ 0.43
CDR2-204ENST00000564542 VGLL2Q8N8G2 317 aa17.75■□□□□ 0.43
CDR2-204ENST00000564542 ARMC5Q96C12 935 aa17.75■□□□□ 0.43
CDR2-204ENST00000564542 EFCC1Q9HA90 598 aa17.75■□□□□ 0.43
CDR2-204ENST00000564542 BRCA2P51587 3418 aa17.74■□□□□ 0.43
CDR2-204ENST00000564542 POTEFA5A3E0 1075 aa17.74■□□□□ 0.43
CDR2-204ENST00000564542 GTF2A2P52657 109 aa17.74■□□□□ 0.43
CDR2-204ENST00000564542 MAP3K9P80192 1104 aa17.74■□□□□ 0.43
CDR2-204ENST00000564542 CHAF1AQ13111 956 aaPredicted RBP17.74■□□□□ 0.43
CDR2-204ENST00000564542 LRRC24Q50LG9 513 aa17.74■□□□□ 0.43
CDR2-204ENST00000564542 METTL24Q5JXM2 366 aa17.74■□□□□ 0.43
CDR2-204ENST00000564542 ANKRD44Q8N8A2 993 aa17.74■□□□□ 0.43
CDR2-204ENST00000564542 CNKSR2Q8WXI2 1034 aa17.74■□□□□ 0.43
CDR2-204ENST00000564542 BRI3BPQ8WY22 251 aa17.74■□□□□ 0.43
CDR2-204ENST00000564542 TEKT1Q969V4 418 aa17.74■□□□□ 0.43
CDR2-204ENST00000564542 IQSEC3Q9UPP2 1182 aaPredicted RBP17.74■□□□□ 0.43
CDR2-204ENST00000564542 CSADQ9Y600 493 aa17.74■□□□□ 0.43
CDR2-204ENST00000564542 ZNF521Q96K83 1311 aa17.73■□□□□ 0.43
CDR2-204ENST00000564542 CCL15-CCL14A0A0B4J2E2 113 aa17.73■□□□□ 0.43
CDR2-204ENST00000564542 FRAT2O75474 233 aaPredicted RBP17.73■□□□□ 0.43
CDR2-204ENST00000564542 PDE8BO95263 885 aa17.73■□□□□ 0.43
CDR2-204ENST00000564542 CCL15Q16663 113 aa17.73■□□□□ 0.43
CDR2-204ENST00000564542 FAM9BQ8IZU0 186 aa17.73■□□□□ 0.43
CDR2-204ENST00000564542 KIF16BQ96L93 1317 aa17.72■□□□□ 0.43
CDR2-204ENST00000564542 CAP1Q01518 475 aa17.72■□□□□ 0.43
CDR2-204ENST00000564542 OTUD5Q96G74 571 aa17.72■□□□□ 0.43
CDR2-204ENST00000564542 ZDHHC15Q96MV8 337 aa17.72■□□□□ 0.43
CDR2-204ENST00000564542 ZFYVE28Q9HCC9 887 aa17.72■□□□□ 0.43
CDR2-204ENST00000564542 MAST3O60307 1309 aa17.72■□□□□ 0.43
CDR2-204ENST00000564542 PTPRCP08575 1304 aa17.72■□□□□ 0.43
CDR2-204ENST00000564542 RPAP1Q9BWH6 1393 aaPredicted RBP17.71■□□□□ 0.43
CDR2-204ENST00000564542 MYH13Q9UKX3 1938 aa17.71■□□□□ 0.43
CDR2-204ENST00000564542 SPDYE5A6NIY4 337 aa17.71■□□□□ 0.43
CDR2-204ENST00000564542 CACNB3P54284 484 aa17.71■□□□□ 0.43
CDR2-204ENST00000564542 TAF1CQ15572 869 aaPredicted RBP17.71■□□□□ 0.43
CDR2-204ENST00000564542 FAM83AQ86UY5 434 aa17.71■□□□□ 0.43
CDR2-204ENST00000564542 MRPL50Q8N5N7 158 aaKnown RBP17.71■□□□□ 0.43
CDR2-204ENST00000564542 GCC1Q96CN9 775 aa17.71■□□□□ 0.43
CDR2-204ENST00000564542 MRIQ9BWK5 157 aa17.71■□□□□ 0.43
CDR2-204ENST00000564542 TMOD2Q9NZR1 351 aa17.71■□□□□ 0.43
CDR2-204ENST00000564542 SUGT1Q9Y2Z0 365 aa17.71■□□□□ 0.43
CDR2-204ENST00000564542 BCAMP50895 628 aa17.7■□□□□ 0.42
CDR2-204ENST00000564542 ARHGEF6Q15052 776 aa17.7■□□□□ 0.42
CDR2-204ENST00000564542 PUM3Q15397 648 aaKnown RBP17.7■□□□□ 0.42
CDR2-204ENST00000564542 FKBP1CQ5VVH2 108 aa17.7■□□□□ 0.42
CDR2-204ENST00000564542 FAM43AQ8N2R8 423 aa17.7■□□□□ 0.42
CDR2-204ENST00000564542 HOOK2Q96ED9 719 aa17.7■□□□□ 0.42
CDR2-204ENST00000564542 SNCAIPQ9Y6H5 919 aa17.7■□□□□ 0.42
CDR2-204ENST00000564542 APOBEC3HQ6NTF7 200 aaKnown RBP17.69■□□□□ 0.42
CDR2-204ENST00000564542 KLHDC4Q8TBB5 520 aa17.69■□□□□ 0.42
CDR2-204ENST00000564542 ZNF333Q96JL9 665 aa17.69■□□□□ 0.42
CDR2-204ENST00000564542 WRNIP1Q96S55 665 aa17.69■□□□□ 0.42
CDR2-204ENST00000564542 ZCCHC17Q9NP64 241 aaKnown RBP17.69■□□□□ 0.42
CDR2-204ENST00000564542 WDHD1O75717 1129 aaPredicted RBP17.68■□□□□ 0.42
CDR2-204ENST00000564542 IFIT1P09914 478 aaKnown RBP17.68■□□□□ 0.42
CDR2-204ENST00000564542 CETPP11597 493 aa17.68■□□□□ 0.42
CDR2-204ENST00000564542 FGFR2P21802 821 aa17.68■□□□□ 0.42
CDR2-204ENST00000564542 ERO1BQ86YB8 467 aa17.68■□□□□ 0.42
CDR2-204ENST00000564542 KIAA0100Q14667 2235 aaKnown RBP17.68■□□□□ 0.42
CDR2-204ENST00000564542 ZNF316A6NFI3 1004 aaPredicted RBP17.67■□□□□ 0.42
CDR2-204ENST00000564542 SLC9C1Q4G0N8 1177 aa17.67■□□□□ 0.42
CDR2-204ENST00000564542 HHIPL2Q6UWX4 724 aa17.67■□□□□ 0.42
CDR2-204ENST00000564542 USP44Q9H0E7 712 aa17.67■□□□□ 0.42
CDR2-204ENST00000564542 PTCH2Q9Y6C5 1203 aa17.67■□□□□ 0.42
CDR2-204ENST00000564542 ZSWIM8A7E2V4 1837 aa17.66■□□□□ 0.42
CDR2-204ENST00000564542 IRF6O14896 467 aa17.66■□□□□ 0.42
CDR2-204ENST00000564542 TLR2O60603 784 aa17.66■□□□□ 0.42
CDR2-204ENST00000564542 EN2P19622 333 aaPredicted RBP17.66■□□□□ 0.42
CDR2-204ENST00000564542 PPIL2Q13356 520 aa17.66■□□□□ 0.42
CDR2-204ENST00000564542 SNAPC2Q13487 334 aa17.66■□□□□ 0.42
CDR2-204ENST00000564542 DCAF15Q66K64 600 aa17.66■□□□□ 0.42
CDR2-204ENST00000564542 NBPF11Q86T75 865 aa17.66■□□□□ 0.42
CDR2-204ENST00000564542 SSH1Q8WYL5 1049 aa17.66■□□□□ 0.42
CDR2-204ENST00000564542 ZKSCAN4Q969J2 545 aaPredicted RBP17.66■□□□□ 0.42
CDR2-204ENST00000564542 TMEM106CQ9BVX2 250 aa17.66■□□□□ 0.42
CDR2-204ENST00000564542 EYA2O00167 538 aa17.65■□□□□ 0.42
CDR2-204ENST00000564542 SLC5A1P13866 664 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms