RNA–Protein interactions for RNA: ENST00000564272.1

SHCBP1-203, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 530 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-203ENST00000564272 FZD1Q9UP38 647 aa24.82■■□□□ 1.56
SHCBP1-203ENST00000564272 RLBP1P12271 317 aa24.81■■□□□ 1.56
SHCBP1-203ENST00000564272 SPDYE2Q495Y8 402 aa24.81■■□□□ 1.56
SHCBP1-203ENST00000564272 DZIP1LQ8IYY4 767 aaKnown RBP24.81■■□□□ 1.56
SHCBP1-203ENST00000564272 TDRD3Q9H7E2 651 aaKnown RBP24.81■■□□□ 1.56
SHCBP1-203ENST00000564272 ZNF70Q9UC06 446 aaPredicted RBP24.81■■□□□ 1.56
SHCBP1-203ENST00000564272 PPP2R3BQ9Y5P8 575 aa24.81■■□□□ 1.56
SHCBP1-203ENST00000564272 PNMA6EA0A0J9YXQ4 647 aa24.8■■□□□ 1.56
SHCBP1-203ENST00000564272 ADORA1P30542 326 aa24.8■■□□□ 1.56
SHCBP1-203ENST00000564272 CA12O43570 354 aa24.79■■□□□ 1.56
SHCBP1-203ENST00000564272 PHKA1P46020 1223 aa24.79■■□□□ 1.56
SHCBP1-203ENST00000564272 ARMC9Q7Z3E5 817 aa24.79■■□□□ 1.56
SHCBP1-203ENST00000564272 TFCP2Q12800 502 aa24.78■■□□□ 1.56
SHCBP1-203ENST00000564272 RASA3Q14644 834 aa24.78■■□□□ 1.56
SHCBP1-203ENST00000564272 ITPRIPQ8IWB1 547 aa24.78■■□□□ 1.56
SHCBP1-203ENST00000564272 TEKT1Q969V4 418 aa24.78■■□□□ 1.56
SHCBP1-203ENST00000564272 ANGEL1Q9UNK9 670 aaKnown RBP24.78■■□□□ 1.56
SHCBP1-203ENST00000564272 HDLBPQ00341 1268 aaKnown RBP24.77■■□□□ 1.56
SHCBP1-203ENST00000564272 WDR66Q8TBY9 1149 aa24.77■■□□□ 1.56
SHCBP1-203ENST00000564272 C1orf115Q9H7X2 142 aa24.77■■□□□ 1.56
SHCBP1-203ENST00000564272 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP24.77■■□□□ 1.56
SHCBP1-203ENST00000564272 TIMM10P62072 90 aa24.76■■□□□ 1.55
SHCBP1-203ENST00000564272 TNFAIP1Q13829 316 aa24.76■■□□□ 1.55
SHCBP1-203ENST00000564272 NBPF12Q5TAG4 269 aaPredicted RBP24.76■■□□□ 1.55
SHCBP1-203ENST00000564272 GNL3LQ9NVN8 582 aaKnown RBP24.76■■□□□ 1.55
SHCBP1-203ENST00000564272 SUGT1Q9Y2Z0 365 aa24.76■■□□□ 1.55
SHCBP1-203ENST00000564272 MAST3O60307 1309 aa24.76■■□□□ 1.55
SHCBP1-203ENST00000564272 TCP10L2B9ZVM9 353 aa24.75■■□□□ 1.55
SHCBP1-203ENST00000564272 CCDC102BQ68D86 513 aa24.75■■□□□ 1.55
SHCBP1-203ENST00000564272 CSRNP1Q96S65 589 aa24.75■■□□□ 1.55
SHCBP1-203ENST00000564272 A0A1B0GUL7 405 aa24.74■■□□□ 1.55
SHCBP1-203ENST00000564272 CAPN15O75808 1086 aa24.74■■□□□ 1.55
SHCBP1-203ENST00000564272 CACNB3P54284 484 aa24.74■■□□□ 1.55
SHCBP1-203ENST00000564272 MKRN3Q13064 507 aaKnown RBP24.74■■□□□ 1.55
SHCBP1-203ENST00000564272 SUPT20HL1Q3ZLR7 823 aa24.74■■□□□ 1.55
SHCBP1-203ENST00000564272 LDLRAD1Q5T700 205 aa24.74■■□□□ 1.55
SHCBP1-203ENST00000564272 CDAN1Q8IWY9 1227 aa24.74■■□□□ 1.55
SHCBP1-203ENST00000564272 ZDHHC15Q96MV8 337 aa24.74■■□□□ 1.55
SHCBP1-203ENST00000564272 AKAP11Q9UKA4 1901 aa24.73■■□□□ 1.55
SHCBP1-203ENST00000564272 DENND2AQ9ULE3 1009 aa24.73■■□□□ 1.55
SHCBP1-203ENST00000564272 AKAP2Q9Y2D5 859 aa24.73■■□□□ 1.55
SHCBP1-203ENST00000564272 SEMA3EO15041 775 aa24.72■■□□□ 1.55
SHCBP1-203ENST00000564272 PRDX5P30044 214 aa24.72■■□□□ 1.55
SHCBP1-203ENST00000564272 MAP3K11Q16584 847 aa24.72■■□□□ 1.55
SHCBP1-203ENST00000564272 APOBEC3HQ6NTF7 200 aaKnown RBP24.72■■□□□ 1.55
SHCBP1-203ENST00000564272 PANK1Q8TE04 598 aa24.72■■□□□ 1.55
SHCBP1-203ENST00000564272 XAGE2Q96GT9 111 aa24.72■■□□□ 1.55
SHCBP1-203ENST00000564272 TEPSINQ96N21 525 aa24.72■■□□□ 1.55
SHCBP1-203ENST00000564272 MRIQ9BWK5 157 aa24.72■■□□□ 1.55
SHCBP1-203ENST00000564272 TMEM39BQ9GZU3 492 aa24.72■■□□□ 1.55
SHCBP1-203ENST00000564272 RNF186Q9NXI6 227 aa24.72■■□□□ 1.55
SHCBP1-203ENST00000564272 ZBTB4Q9P1Z0 1013 aaPredicted RBP24.72■■□□□ 1.55
SHCBP1-203ENST00000564272 ZBTB7BO15156 539 aaPredicted RBP24.71■■□□□ 1.55
SHCBP1-203ENST00000564272 PPP1R12BO60237 982 aaPredicted RBP24.71■■□□□ 1.55
SHCBP1-203ENST00000564272 G3BP1Q13283 466 aaKnown RBP eCLIP24.71■■□□□ 1.55
SHCBP1-203ENST00000564272 RASGRF1Q13972 1273 aa24.71■■□□□ 1.55
SHCBP1-203ENST00000564272 POLA2Q14181 598 aa24.71■■□□□ 1.55
SHCBP1-203ENST00000564272 DIXDC1Q155Q3 683 aa24.71■■□□□ 1.55
SHCBP1-203ENST00000564272 HHIPL2Q6UWX4 724 aa24.71■■□□□ 1.55
SHCBP1-203ENST00000564272 CLMNQ96JQ2 1002 aa24.71■■□□□ 1.55
SHCBP1-203ENST00000564272 SAGE1Q9NXZ1 904 aa24.71■■□□□ 1.55
SHCBP1-203ENST00000564272 OTOFQ9HC10 1997 aa24.71■■□□□ 1.55
SHCBP1-203ENST00000564272 SALL1Q9NSC2 1324 aa24.7■■□□□ 1.54
SHCBP1-203ENST00000564272 TRPA1O75762 1119 aa24.7■■□□□ 1.54
SHCBP1-203ENST00000564272 TNNI2P48788 182 aa24.7■■□□□ 1.54
SHCBP1-203ENST00000564272 NEUROD6Q96NK8 337 aa24.7■■□□□ 1.54
SHCBP1-203ENST00000564272 DAGLAQ9Y4D2 1042 aa24.7■■□□□ 1.54
SHCBP1-203ENST00000564272 CASP8AP2Q9UKL3 1982 aa24.7■■□□□ 1.54
SHCBP1-203ENST00000564272 LDHBP07195 334 aaKnown RBP24.69■■□□□ 1.54
SHCBP1-203ENST00000564272 ATP8B2P98198 1209 aa24.69■■□□□ 1.54
SHCBP1-203ENST00000564272 SSH3Q8TE77 659 aa24.69■■□□□ 1.54
SHCBP1-203ENST00000564272 TMOD2Q9NZR1 351 aa24.69■■□□□ 1.54
SHCBP1-203ENST00000564272 USP2O75604 605 aaPredicted RBP24.68■■□□□ 1.54
SHCBP1-203ENST00000564272 IREB2P48200 963 aaKnown RBP24.68■■□□□ 1.54
SHCBP1-203ENST00000564272 MVPQ14764 893 aaKnown RBP24.68■■□□□ 1.54
SHCBP1-203ENST00000564272 REM2Q8IYK8 340 aaPredicted RBP24.68■■□□□ 1.54
SHCBP1-203ENST00000564272 ZBTB22O15209 634 aa24.67■■□□□ 1.54
SHCBP1-203ENST00000564272 SPRYD7Q5W111 196 aa24.67■■□□□ 1.54
SHCBP1-203ENST00000564272 SLC10A4Q96EP9 437 aa24.67■■□□□ 1.54
SHCBP1-203ENST00000564272 PDS5AQ29RF7 1337 aaKnown RBP24.66■■□□□ 1.54
SHCBP1-203ENST00000564272 OS9Q13438 667 aaPredicted RBP24.65■■□□□ 1.54
SHCBP1-203ENST00000564272 WNK4Q96J92 1243 aa24.65■■□□□ 1.54
SHCBP1-203ENST00000564272 SURF6O75683 361 aaKnown RBP24.64■■□□□ 1.54
SHCBP1-203ENST00000564272 GORABQ5T7V8 394 aa24.64■■□□□ 1.54
SHCBP1-203ENST00000564272 FKBP1CQ5VVH2 108 aa24.64■■□□□ 1.54
SHCBP1-203ENST00000564272 CDC42EP5Q6NZY7 148 aa24.64■■□□□ 1.54
SHCBP1-203ENST00000564272 CEP85Q6P2H3 762 aa24.64■■□□□ 1.54
SHCBP1-203ENST00000564272 PI16Q6UXB8 463 aa24.64■■□□□ 1.54
SHCBP1-203ENST00000564272 ZGPATQ8N5A5 531 aaKnown RBP24.64■■□□□ 1.54
SHCBP1-203ENST00000564272 ABCF2Q9UG63 623 aa24.64■■□□□ 1.54
SHCBP1-203ENST00000564272 MYH2Q9UKX2 1941 aa24.64■■□□□ 1.53
SHCBP1-203ENST00000564272 SREBF2Q12772 1141 aa24.63■■□□□ 1.53
SHCBP1-203ENST00000564272 FAM83AQ86UY5 434 aa24.63■■□□□ 1.53
SHCBP1-203ENST00000564272 ANKRD13AQ8IZ07 590 aa24.63■■□□□ 1.53
SHCBP1-203ENST00000564272 HMG20BQ9P0W2 317 aa24.63■■□□□ 1.53
SHCBP1-203ENST00000564272 RCAN3Q9UKA8 241 aa24.63■■□□□ 1.53
SHCBP1-203ENST00000564272 UNCXA6NJT0 531 aa24.62■■□□□ 1.53
SHCBP1-203ENST00000564272 GJA5P36382 358 aa24.62■■□□□ 1.53
SHCBP1-203ENST00000564272 TM4SF4P48230 202 aa24.62■■□□□ 1.53
SHCBP1-203ENST00000564272 DZIP1Q86YF9 867 aaKnown RBP24.62■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms