RNA–Protein interactions for RNA: ENST00000564252.1

NME3-206, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 599 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-206ENST00000564252 ZBTB4Q9P1Z0 1013 aaPredicted RBP29.94■■■□□ 2.38
NME3-206ENST00000564252 TNRC18O15417 2968 aaPredicted RBP29.93■■■□□ 2.38
NME3-206ENST00000564252 FGFR2P21802 821 aa29.93■■■□□ 2.38
NME3-206ENST00000564252 IREB2P48200 963 aaKnown RBP29.93■■■□□ 2.38
NME3-206ENST00000564252 BCAMP50895 628 aa29.93■■■□□ 2.38
NME3-206ENST00000564252 TBC1D22AQ8WUA7 517 aa29.93■■■□□ 2.38
NME3-206ENST00000564252 KIF16BQ96L93 1317 aa29.93■■■□□ 2.38
NME3-206ENST00000564252 OTOFQ9HC10 1997 aa29.92■■■□□ 2.38
NME3-206ENST00000564252 FRAT2O75474 233 aaPredicted RBP29.92■■■□□ 2.38
NME3-206ENST00000564252 PUM3Q15397 648 aaKnown RBP29.92■■■□□ 2.38
NME3-206ENST00000564252 TEPSINQ96N21 525 aa29.92■■■□□ 2.38
NME3-206ENST00000564252 INHBEP58166 350 aa29.91■■■□□ 2.38
NME3-206ENST00000564252 CDAN1Q8IWY9 1227 aa29.91■■■□□ 2.38
NME3-206ENST00000564252 EYA2O00167 538 aa29.9■■■□□ 2.38
NME3-206ENST00000564252 ALDH1A1P00352 501 aa29.9■■■□□ 2.38
NME3-206ENST00000564252 CT47B1P0C2W7 299 aaPredicted RBP29.9■■■□□ 2.38
NME3-206ENST00000564252 HDLBPQ00341 1268 aaKnown RBP29.9■■■□□ 2.38
NME3-206ENST00000564252 PKN2Q16513 984 aaKnown RBP29.9■■■□□ 2.38
NME3-206ENST00000564252 IFNL1Q8IU54 200 aa29.9■■■□□ 2.38
NME3-206ENST00000564252 ANKRD13AQ8IZ07 590 aa29.9■■■□□ 2.38
NME3-206ENST00000564252 TCP10L2B9ZVM9 353 aa29.89■■■□□ 2.38
NME3-206ENST00000564252 IFIT1P09914 478 aaKnown RBP29.89■■■□□ 2.38
NME3-206ENST00000564252 GJA5P36382 358 aa29.89■■■□□ 2.38
NME3-206ENST00000564252 HPS5Q9UPZ3 1129 aa29.89■■■□□ 2.38
NME3-206ENST00000564252 IGF2BP3O00425 579 aaKnown RBP eCLIP29.88■■■□□ 2.37
NME3-206ENST00000564252 FKTNO75072 461 aa29.88■■■□□ 2.37
NME3-206ENST00000564252 TMEM39BQ9GZU3 492 aa29.88■■■□□ 2.37
NME3-206ENST00000564252 NOB1Q9ULX3 412 aaKnown RBP29.88■■■□□ 2.37
NME3-206ENST00000564252 SOX10P56693 466 aa29.87■■■□□ 2.37
NME3-206ENST00000564252 ATG9AQ7Z3C6 839 aa29.87■■■□□ 2.37
NME3-206ENST00000564252 TEKT1Q969V4 418 aa29.87■■■□□ 2.37
NME3-206ENST00000564252 UBTFL1P0CB47 393 aaPredicted RBP29.86■■■□□ 2.37
NME3-206ENST00000564252 TNNI2P48788 182 aa29.86■■■□□ 2.37
NME3-206ENST00000564252 LPIN2Q92539 896 aa29.85■■■□□ 2.37
NME3-206ENST00000564252 MRIQ9BWK5 157 aa29.85■■■□□ 2.37
NME3-206ENST00000564252 SUGT1Q9Y2Z0 365 aa29.85■■■□□ 2.37
NME3-206ENST00000564252 MYH13Q9UKX3 1938 aa29.84■■■□□ 2.37
NME3-206ENST00000564252 CCER2I3L3R5 266 aa29.84■■■□□ 2.37
NME3-206ENST00000564252 SLC5A1P13866 664 aa29.84■■■□□ 2.37
NME3-206ENST00000564252 ZDHHC15Q96MV8 337 aa29.84■■■□□ 2.37
NME3-206ENST00000564252 ELP3Q9H9T3 547 aa29.84■■■□□ 2.37
NME3-206ENST00000564252 CACNB3P54284 484 aa29.83■■■□□ 2.37
NME3-206ENST00000564252 PPP1R3FQ6ZSY5 799 aaPredicted RBP29.83■■■□□ 2.37
NME3-206ENST00000564252 API5Q9BZZ5 524 aaKnown RBP29.83■■■□□ 2.37
NME3-206ENST00000564252 MAST3O60307 1309 aa29.82■■■□□ 2.36
NME3-206ENST00000564252 APOBEC3HQ6NTF7 200 aaKnown RBP29.82■■■□□ 2.36
NME3-206ENST00000564252 OPTNQ96CV9 577 aa29.82■■■□□ 2.36
NME3-206ENST00000564252 SIL1Q9H173 461 aa29.82■■■□□ 2.36
NME3-206ENST00000564252 FBXO3Q9UK99 471 aa29.82■■■□□ 2.36
NME3-206ENST00000564252 TESPA1A2RU30 521 aaPredicted RBP29.81■■■□□ 2.36
NME3-206ENST00000564252 CIAO1O76071 339 aa29.81■■■□□ 2.36
NME3-206ENST00000564252 FBXO46Q6PJ61 603 aaPredicted RBP29.81■■■□□ 2.36
NME3-206ENST00000564252 PTPN18Q99952 460 aa29.81■■■□□ 2.36
NME3-206ENST00000564252 HTTP42858 3142 aa29.81■■■□□ 2.36
NME3-206ENST00000564252 DDX55Q8NHQ9 600 aaKnown RBP eCLIP29.8■■■□□ 2.362e-7■■■■□ 21.2
NME3-206ENST00000564252 LRRFIP2Q9Y608 721 aaKnown RBP29.8■■■□□ 2.36
NME3-206ENST00000564252 RARSP54136 660 aaKnown RBP29.79■■■□□ 2.36
NME3-206ENST00000564252 MAP3K9P80192 1104 aa29.79■■■□□ 2.36
NME3-206ENST00000564252 VGLL4Q14135 290 aa29.79■■■□□ 2.36
NME3-206ENST00000564252 FKBP1CQ5VVH2 108 aa29.79■■■□□ 2.36
NME3-206ENST00000564252 HHIPL2Q6UWX4 724 aa29.79■■■□□ 2.36
NME3-206ENST00000564252 WDR66Q8TBY9 1149 aa29.79■■■□□ 2.36
NME3-206ENST00000564252 CNKSR2Q8WXI2 1034 aa29.79■■■□□ 2.36
NME3-206ENST00000564252 OTUD7BQ6GQQ9 843 aa29.78■■■□□ 2.36
NME3-206ENST00000564252 FAM83AQ86UY5 434 aa29.78■■■□□ 2.36
NME3-206ENST00000564252 MS4A4AQ96JQ5 239 aa29.78■■■□□ 2.36
NME3-206ENST00000564252 TMOD2Q9NZR1 351 aa29.78■■■□□ 2.36
NME3-206ENST00000564252 CRHR2Q13324 411 aa29.77■■■□□ 2.36
NME3-206ENST00000564252 ATP2B3Q16720 1220 aa29.77■■■□□ 2.36
NME3-206ENST00000564252 MEIS3Q99687 375 aa29.77■■■□□ 2.36
NME3-206ENST00000564252 CEP126Q9P2H0 1117 aa29.77■■■□□ 2.36
NME3-206ENST00000564252 PA2G4Q9UQ80 394 aaKnown RBP29.76■■■□□ 2.35
NME3-206ENST00000564252 HDAC5Q9UQL6 1122 aa29.75■■■□□ 2.35
NME3-206ENST00000564252 CSADQ9Y600 493 aa29.75■■■□□ 2.35
NME3-206ENST00000564252 RPAP1Q9BWH6 1393 aaPredicted RBP29.75■■■□□ 2.35
NME3-206ENST00000564252 IL15P40933 162 aaPredicted RBP29.74■■■□□ 2.35
NME3-206ENST00000564252 COPRSQ9NQ92 184 aa29.74■■■□□ 2.35
NME3-206ENST00000564252 OTOP1Q7RTM1 612 aa29.73■■■□□ 2.35
NME3-206ENST00000564252 BRI3BPQ8WY22 251 aa29.73■■■□□ 2.35
NME3-206ENST00000564252 ARHGAP45Q92619 1136 aa29.73■■■□□ 2.35
NME3-206ENST00000564252 TRIM17Q9Y577 477 aa29.73■■■□□ 2.35
NME3-206ENST00000564252 PDE4DIPQ5VU43 2346 aa29.73■■■□□ 2.35
NME3-206ENST00000564252 PRDX5P30044 214 aa29.72■■■□□ 2.35
NME3-206ENST00000564252 INTS3Q68E01 1043 aaKnown RBP29.72■■■□□ 2.35
NME3-206ENST00000564252 OTUD5Q96G74 571 aa29.72■■■□□ 2.35
NME3-206ENST00000564252 GNL3LQ9NVN8 582 aaKnown RBP29.72■■■□□ 2.35
NME3-206ENST00000564252 DAGLAQ9Y4D2 1042 aa29.72■■■□□ 2.35
NME3-206ENST00000564252 SPDYE5A6NIY4 337 aa29.71■■■□□ 2.35
NME3-206ENST00000564252 PHKA1P46020 1223 aa29.71■■■□□ 2.35
NME3-206ENST00000564252 GTF2A2P52657 109 aa29.71■■■□□ 2.35
NME3-206ENST00000564252 DIXDC1Q155Q3 683 aa29.71■■■□□ 2.35
NME3-206ENST00000564252 HOOK2Q96ED9 719 aa29.71■■■□□ 2.35
NME3-206ENST00000564252 ERO1AQ96HE7 468 aa29.71■■■□□ 2.35
NME3-206ENST00000564252 WRNIP1Q96S55 665 aa29.71■■■□□ 2.35
NME3-206ENST00000564252 SNCAIPQ9Y6H5 919 aa29.71■■■□□ 2.35
NME3-206ENST00000564252 CCL15-CCL14A0A0B4J2E2 113 aa29.7■■■□□ 2.35
NME3-206ENST00000564252 CCL15Q16663 113 aa29.7■■■□□ 2.35
NME3-206ENST00000564252 CD99L2Q8TCZ2 262 aa29.7■■■□□ 2.35
NME3-206ENST00000564252 SALL1Q9NSC2 1324 aa29.7■■■□□ 2.34
NME3-206ENST00000564252 CENPFP49454 3210 aa29.69■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms