RNA–Protein interactions for RNA: ENST00000564247.1

CMTM3-208, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,127 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-208ENST00000564247 RBM26Q5T8P6 1007 aaKnown RBP20.58■□□□□ 0.89
CMTM3-208ENST00000564247 TTLL5Q6EMB2 1281 aa20.58■□□□□ 0.89
CMTM3-208ENST00000564247 CDC37L1Q7L3B6 337 aa20.58■□□□□ 0.89
CMTM3-208ENST00000564247 HAUS7Q99871 368 aa20.58■□□□□ 0.89
CMTM3-208ENST00000564247 TRAF5O00463 557 aa20.57■□□□□ 0.88
CMTM3-208ENST00000564247 IL1R1P14778 569 aa20.57■□□□□ 0.88
CMTM3-208ENST00000564247 FBXW7Q969H0 707 aa20.57■□□□□ 0.88
CMTM3-208ENST00000564247 DNAJC2Q99543 621 aaKnown RBP20.57■□□□□ 0.88
CMTM3-208ENST00000564247 GLIS2Q9BZE0 524 aaPredicted RBP20.57■□□□□ 0.88
CMTM3-208ENST00000564247 DENND2AQ9ULE3 1009 aa20.57■□□□□ 0.88
CMTM3-208ENST00000564247 MMP14P50281 582 aa20.56■□□□□ 0.88
CMTM3-208ENST00000564247 GTF2IP78347 998 aa20.56■□□□□ 0.88
CMTM3-208ENST00000564247 FMR1Q06787 632 aaKnown RBP eCLIP20.56■□□□□ 0.88
CMTM3-208ENST00000564247 SPATA5Q8NB90 893 aa20.56■□□□□ 0.88
CMTM3-208ENST00000564247 RILPL2Q969X0 211 aa20.56■□□□□ 0.88
CMTM3-208ENST00000564247 MXD3Q9BW11 206 aa20.56■□□□□ 0.88
CMTM3-208ENST00000564247 MYOZ2Q9NPC6 264 aa20.56■□□□□ 0.88
CMTM3-208ENST00000564247 CNTNAP1P78357 1384 aa20.56■□□□□ 0.88
CMTM3-208ENST00000564247 MAP4K4O95819 1239 aaPredicted RBP20.55■□□□□ 0.88
CMTM3-208ENST00000564247 GSPT1P15170 499 aaKnown RBP20.55■□□□□ 0.88
CMTM3-208ENST00000564247 EVI5LQ96CN4 794 aa20.55■□□□□ 0.88
CMTM3-208ENST00000564247 SNRKQ9NRH2 765 aa20.55■□□□□ 0.88
CMTM3-208ENST00000564247 ZBTB22O15209 634 aa20.54■□□□□ 0.88
CMTM3-208ENST00000564247 SDSP20132 328 aa20.54■□□□□ 0.88
CMTM3-208ENST00000564247 MCAMP43121 646 aa20.54■□□□□ 0.88
CMTM3-208ENST00000564247 TTF1Q15361 905 aaPredicted RBP20.54■□□□□ 0.88
CMTM3-208ENST00000564247 CST9Q5W186 159 aa20.54■□□□□ 0.88
CMTM3-208ENST00000564247 OGFOD1Q8N543 542 aa20.54■□□□□ 0.88
CMTM3-208ENST00000564247 TDRD7Q8NHU6 1098 aaKnown RBP20.54■□□□□ 0.88
CMTM3-208ENST00000564247 DCPSQ96C86 337 aaKnown RBP20.54■□□□□ 0.88
CMTM3-208ENST00000564247 PAG1Q9NWQ8 432 aa20.54■□□□□ 0.88
CMTM3-208ENST00000564247 HMG20BQ9P0W2 317 aa20.54■□□□□ 0.88
CMTM3-208ENST00000564247 MKRN1Q9UHC7 482 aaKnown RBP20.54■□□□□ 0.88
CMTM3-208ENST00000564247 IQSEC3Q9UPP2 1182 aaPredicted RBP20.54■□□□□ 0.88
CMTM3-208ENST00000564247 RASSF10A6NK89 507 aa20.53■□□□□ 0.88
CMTM3-208ENST00000564247 GOLIM4O00461 696 aa20.53■□□□□ 0.88
CMTM3-208ENST00000564247 ZAP70P43403 619 aa20.53■□□□□ 0.88
CMTM3-208ENST00000564247 RASGRF1Q13972 1273 aa20.53■□□□□ 0.88
CMTM3-208ENST00000564247 USP48Q86UV5 1035 aa20.53■□□□□ 0.88
CMTM3-208ENST00000564247 SCARF1Q14162 830 aa20.52■□□□□ 0.88
CMTM3-208ENST00000564247 LRRFIP1Q32MZ4 808 aaKnown RBP20.52■□□□□ 0.88
CMTM3-208ENST00000564247 KRT26Q7Z3Y9 468 aa20.52■□□□□ 0.88
CMTM3-208ENST00000564247 CELF2O95319 508 aaKnown RBP20.51■□□□□ 0.87
CMTM3-208ENST00000564247 FKBP1AP62942 108 aaKnown RBP20.51■□□□□ 0.87
CMTM3-208ENST00000564247 WDR66Q8TBY9 1149 aa20.51■□□□□ 0.87
CMTM3-208ENST00000564247 GGA3Q9NZ52 723 aa20.51■□□□□ 0.87
CMTM3-208ENST00000564247 HDAC9Q9UKV0 1011 aa20.51■□□□□ 0.87
CMTM3-208ENST00000564247 ABT1Q9ULW3 272 aaKnown RBP20.51■□□□□ 0.87
CMTM3-208ENST00000564247 ASTN2O75129 1339 aaPredicted RBP20.51■□□□□ 0.87
CMTM3-208ENST00000564247 PDS5AQ29RF7 1337 aaKnown RBP20.51■□□□□ 0.87
CMTM3-208ENST00000564247 CHAF1AQ13111 956 aaPredicted RBP20.5■□□□□ 0.87
CMTM3-208ENST00000564247 DEFB115Q30KQ5 88 aa20.5■□□□□ 0.87
CMTM3-208ENST00000564247 CASC1Q6TDU7 716 aa20.5■□□□□ 0.87
CMTM3-208ENST00000564247 KIAA0825Q8IV33 1275 aa20.5■□□□□ 0.87
CMTM3-208ENST00000564247 CERS5Q8N5B7 392 aa20.5■□□□□ 0.87
CMTM3-208ENST00000564247 FSD1Q9BTV5 496 aa20.5■□□□□ 0.87
CMTM3-208ENST00000564247 TLL2Q9Y6L7 1015 aa20.5■□□□□ 0.87
CMTM3-208ENST00000564247 NDUFB9Q9Y6M9 179 aa20.5■□□□□ 0.87
CMTM3-208ENST00000564247 AKAP11Q9UKA4 1901 aa20.5■□□□□ 0.87
CMTM3-208ENST00000564247 FAM205AQ6ZU69 1335 aa20.5■□□□□ 0.87
CMTM3-208ENST00000564247 PITPNM2Q9BZ72 1349 aa20.5■□□□□ 0.87
CMTM3-208ENST00000564247 CYP2E1P05181 493 aaPredicted RBP20.49■□□□□ 0.87
CMTM3-208ENST00000564247 ANGEL2Q5VTE6 544 aaKnown RBP20.49■□□□□ 0.87
CMTM3-208ENST00000564247 PI16Q6UXB8 463 aa20.49■□□□□ 0.87
CMTM3-208ENST00000564247 TICAM2Q86XR7 235 aa20.49■□□□□ 0.87
CMTM3-208ENST00000564247 SULF1Q8IWU6 871 aa20.49■□□□□ 0.87
CMTM3-208ENST00000564247 ZGPATQ8N5A5 531 aaKnown RBP20.49■□□□□ 0.87
CMTM3-208ENST00000564247 KBTBD3Q8NAB2 608 aa20.49■□□□□ 0.87
CMTM3-208ENST00000564247 AK9Q5TCS8 1911 aa20.49■□□□□ 0.87
CMTM3-208ENST00000564247 ADM5C9JUS6 153 aa20.48■□□□□ 0.87
CMTM3-208ENST00000564247 HIP1O00291 1037 aa20.48■□□□□ 0.87
CMTM3-208ENST00000564247 CDC45O75419 566 aa20.48■□□□□ 0.87
CMTM3-208ENST00000564247 VEGFBP49765 207 aa20.48■□□□□ 0.87
CMTM3-208ENST00000564247 NBPF9Q3BBW0 867 aa20.48■□□□□ 0.87
CMTM3-208ENST00000564247 SPTY2D1Q68D10 685 aaPredicted RBP20.48■□□□□ 0.87
CMTM3-208ENST00000564247 ZSCAN25Q6NSZ9 544 aa20.48■□□□□ 0.87
CMTM3-208ENST00000564247 TBC1D22AQ8WUA7 517 aa20.48■□□□□ 0.87
CMTM3-208ENST00000564247 EDC3Q96F86 508 aaKnown RBP20.48■□□□□ 0.87
CMTM3-208ENST00000564247 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.48■□□□□ 0.87
CMTM3-208ENST00000564247 MYH13Q9UKX3 1938 aa20.48■□□□□ 0.87
CMTM3-208ENST00000564247 WNT10BO00744 389 aa20.47■□□□□ 0.87
CMTM3-208ENST00000564247 DLK2Q6UY11 383 aa20.47■□□□□ 0.87
CMTM3-208ENST00000564247 ANTXR1Q9H6X2 564 aa20.47■□□□□ 0.87
CMTM3-208ENST00000564247 ZNF408Q9H9D4 720 aa20.47■□□□□ 0.87
CMTM3-208ENST00000564247 LRP2BPQ9P2M1 347 aa20.47■□□□□ 0.87
CMTM3-208ENST00000564247 ABCF2Q9UG63 623 aa20.47■□□□□ 0.87
CMTM3-208ENST00000564247 MAP3K12Q12852 859 aa20.46■□□□□ 0.87
CMTM3-208ENST00000564247 TBC1D9Q6ZT07 1266 aa20.46■□□□□ 0.87
CMTM3-208ENST00000564247 SAPCD2Q86UD0 394 aa20.46■□□□□ 0.87
CMTM3-208ENST00000564247 ZBED3Q96IU2 234 aaPredicted RBP20.46■□□□□ 0.87
CMTM3-208ENST00000564247 JAG2Q9Y219 1238 aa20.46■□□□□ 0.87
CMTM3-208ENST00000564247 EIF5BO60841 1220 aaKnown RBP20.45■□□□□ 0.86
CMTM3-208ENST00000564247 IGSF3O75054 1194 aa20.45■□□□□ 0.86
CMTM3-208ENST00000564247 IDH1O75874 414 aaKnown RBP20.45■□□□□ 0.86
CMTM3-208ENST00000564247 ZFYP08048 801 aaPredicted RBP20.45■□□□□ 0.86
CMTM3-208ENST00000564247 ERICH6Q7L0X2 663 aa20.45■□□□□ 0.86
CMTM3-208ENST00000564247 MTMR14Q8NCE2 650 aa20.45■□□□□ 0.86
CMTM3-208ENST00000564247 HHIPL1Q96JK4 782 aa20.45■□□□□ 0.86
CMTM3-208ENST00000564247 PIH1D3Q9NQM4 214 aaKnown RBP20.45■□□□□ 0.86
CMTM3-208ENST00000564247 DIAPH3Q9NSV4 1193 aa20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms