RNA–Protein interactions for RNA: ENST00000563911.5

HERPUD1-208, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 3

Gene HERPUD1, Length 844 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-208ENST00000563911 IDI1Q13907 227 aa8.99□□□□□ -0.97
HERPUD1-208ENST00000563911 MRPL58Q14197 206 aaKnown RBP8.99□□□□□ -0.97
HERPUD1-208ENST00000563911 DHX32Q7L7V1 743 aaKnown RBP8.99□□□□□ -0.97
HERPUD1-208ENST00000563911 BACH2Q9BYV9 841 aa8.99□□□□□ -0.97
HERPUD1-208ENST00000563911 AK5Q9Y6K8 562 aa8.99□□□□□ -0.97
HERPUD1-208ENST00000563911 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.99□□□□□ -0.97
HERPUD1-208ENST00000563911 ARHGEF5Q12774 1597 aa8.99□□□□□ -0.97
HERPUD1-208ENST00000563911 TMEM2Q9UHN6 1383 aa8.99□□□□□ -0.97
HERPUD1-208ENST00000563911 EDN3P14138 238 aa8.98□□□□□ -0.97
HERPUD1-208ENST00000563911 MX2P20592 715 aa8.98□□□□□ -0.97
HERPUD1-208ENST00000563911 HYAL2Q12891 473 aa8.98□□□□□ -0.97
HERPUD1-208ENST00000563911 SYT9Q86SS6 491 aa8.98□□□□□ -0.97
HERPUD1-208ENST00000563911 NCAPG2Q86XI2 1143 aa8.98□□□□□ -0.97
HERPUD1-208ENST00000563911 PIK3C2BO00750 1634 aa8.98□□□□□ -0.97
HERPUD1-208ENST00000563911 C2CD2LO14523 706 aa8.97□□□□□ -0.97
HERPUD1-208ENST00000563911 TSPY4P0CV99 314 aa8.97□□□□□ -0.97
HERPUD1-208ENST00000563911 TSPY10P0CW01 314 aa8.97□□□□□ -0.97
HERPUD1-208ENST00000563911 EIF4BP23588 611 aaKnown RBP8.97□□□□□ -0.97
HERPUD1-208ENST00000563911 SOX18P35713 384 aa8.97□□□□□ -0.97
HERPUD1-208ENST00000563911 TBC1D8BQ0IIM8 1120 aa8.97□□□□□ -0.97
HERPUD1-208ENST00000563911 ZNF787Q6DD87 383 aa8.97□□□□□ -0.97
HERPUD1-208ENST00000563911 NSUN5Q96P11 429 aaKnown RBP8.97□□□□□ -0.97
HERPUD1-208ENST00000563911 LATS2Q9NRM7 1088 aa8.97□□□□□ -0.97
HERPUD1-208ENST00000563911 SALL4Q9UJQ4 1053 aa8.97□□□□□ -0.97
HERPUD1-208ENST00000563911 GIPC1O14908 333 aa8.96□□□□□ -0.98
HERPUD1-208ENST00000563911 RECKO95980 971 aa8.96□□□□□ -0.98
HERPUD1-208ENST00000563911 PCBP4P57723 403 aaKnown RBP8.96□□□□□ -0.98
HERPUD1-208ENST00000563911 COL13A1Q5TAT6 717 aaPredicted RBP8.96□□□□□ -0.98
HERPUD1-208ENST00000563911 ZNF468Q5VIY5 522 aaPredicted RBP8.96□□□□□ -0.98
HERPUD1-208ENST00000563911 NPAS3Q8IXF0 933 aa8.96□□□□□ -0.98
HERPUD1-208ENST00000563911 OSBPL7Q9BZF2 842 aa8.96□□□□□ -0.98
HERPUD1-208ENST00000563911 UBE2OQ9C0C9 1292 aaKnown RBP8.96□□□□□ -0.98
HERPUD1-208ENST00000563911 ARHGAP31Q2M1Z3 1444 aa8.96□□□□□ -0.98
HERPUD1-208ENST00000563911 PRDM15P57071 1507 aaPredicted RBP8.95□□□□□ -0.98
HERPUD1-208ENST00000563911 MAST1Q9Y2H9 1570 aa8.95□□□□□ -0.98
HERPUD1-208ENST00000563911 COL16A1Q07092 1604 aaPredicted RBP8.95□□□□□ -0.98
HERPUD1-208ENST00000563911 H3BM21 787 aa8.95□□□□□ -0.98
HERPUD1-208ENST00000563911 NRLP54845 237 aa8.95□□□□□ -0.98
HERPUD1-208ENST00000563911 MLLT1Q03111 559 aaPredicted RBP8.95□□□□□ -0.98
HERPUD1-208ENST00000563911 NXPE4Q6UWF7 544 aa8.95□□□□□ -0.98
HERPUD1-208ENST00000563911 GPR161Q8N6U8 529 aaKnown RBP8.95□□□□□ -0.98
HERPUD1-208ENST00000563911 TMEM87AQ8NBN3 555 aa8.95□□□□□ -0.98
HERPUD1-208ENST00000563911 SPACA7Q96KW9 195 aa8.95□□□□□ -0.98
HERPUD1-208ENST00000563911 BCO2Q9BYV7 579 aa8.95□□□□□ -0.98
HERPUD1-208ENST00000563911 EHD4Q9H223 541 aa8.95□□□□□ -0.98
HERPUD1-208ENST00000563911 C12orf49Q9H741 205 aa8.95□□□□□ -0.98
HERPUD1-208ENST00000563911 PPP4R2Q9NY27 417 aa8.95□□□□□ -0.98
HERPUD1-208ENST00000563911 NSFL1CQ9UNZ2 370 aaKnown RBP8.95□□□□□ -0.98
HERPUD1-208ENST00000563911 JCADQ9P266 1359 aa8.95□□□□□ -0.98
HERPUD1-208ENST00000563911 A0A1W2PP55 124 aa8.94□□□□□ -0.98
HERPUD1-208ENST00000563911 TCF3P15923 654 aa8.94□□□□□ -0.98
HERPUD1-208ENST00000563911 GAS6Q14393 721 aa8.94□□□□□ -0.98
HERPUD1-208ENST00000563911 KIAA0319Q5VV43 1072 aa8.94□□□□□ -0.98
HERPUD1-208ENST00000563911 HFE2Q6ZVN8 426 aa8.94□□□□□ -0.98
HERPUD1-208ENST00000563911 SUV39H2Q9H5I1 410 aa8.94□□□□□ -0.98
HERPUD1-208ENST00000563911 EID1Q9Y6B2 187 aa8.94□□□□□ -0.98
HERPUD1-208ENST00000563911 LOC102724428A0A0B4J2F2 783 aa8.93□□□□□ -0.98
HERPUD1-208ENST00000563911 ZBTB42B2RXF5 422 aa8.93□□□□□ -0.98
HERPUD1-208ENST00000563911 J3QW42 95 aa8.93□□□□□ -0.98
HERPUD1-208ENST00000563911 SIN3BO75182 1162 aa8.93□□□□□ -0.98
HERPUD1-208ENST00000563911 KIF4AO95239 1232 aa8.93□□□□□ -0.98
HERPUD1-208ENST00000563911 HOXD8P13378 290 aaPredicted RBP8.93□□□□□ -0.98
HERPUD1-208ENST00000563911 SIK1P57059 783 aa8.93□□□□□ -0.98
HERPUD1-208ENST00000563911 GRM2Q14416 872 aa8.93□□□□□ -0.98
HERPUD1-208ENST00000563911 PCSK7Q16549 785 aa8.93□□□□□ -0.98
HERPUD1-208ENST00000563911 PEAR1Q5VY43 1037 aaPredicted RBP8.93□□□□□ -0.98
HERPUD1-208ENST00000563911 TRPM4Q8TD43 1214 aa8.93□□□□□ -0.98
HERPUD1-208ENST00000563911 RRP7BPQ9NSQ0 103 aa8.93□□□□□ -0.98
HERPUD1-208ENST00000563911 DNAJB12Q9NXW2 375 aaKnown RBP8.93□□□□□ -0.98
HERPUD1-208ENST00000563911 EIF2AK4Q9P2K8 1649 aaKnown RBP8.93□□□□□ -0.98
HERPUD1-208ENST00000563911 PHLPP1O60346 1717 aa8.93□□□□□ -0.98
HERPUD1-208ENST00000563911 NWD1Q149M9 1564 aa8.92□□□□□ -0.98
HERPUD1-208ENST00000563911 GPLD1P80108 840 aa8.92□□□□□ -0.98
HERPUD1-208ENST00000563911 CEP120Q8N960 986 aa8.92□□□□□ -0.98
HERPUD1-208ENST00000563911 OSMRQ99650 979 aa8.92□□□□□ -0.98
HERPUD1-208ENST00000563911 SRCIN1Q9C0H9 1055 aa8.92□□□□□ -0.98
HERPUD1-208ENST00000563911 AVENQ9NQS1 362 aaPredicted RBP8.92□□□□□ -0.98
HERPUD1-208ENST00000563911 MBIPQ9NS73 344 aa8.92□□□□□ -0.98
HERPUD1-208ENST00000563911 IGSF5Q9NSI5 407 aa8.92□□□□□ -0.98
HERPUD1-208ENST00000563911 FAM8A1Q9UBU6 413 aa8.92□□□□□ -0.98
HERPUD1-208ENST00000563911 TRAK1Q9UPV9 953 aa8.92□□□□□ -0.98
HERPUD1-208ENST00000563911 EFCAB6Q5THR3 1501 aa8.91□□□□□ -0.98
HERPUD1-208ENST00000563911 ABCC5O15440 1437 aa8.91□□□□□ -0.98
HERPUD1-208ENST00000563911 SCAMP3O14828 347 aaKnown RBP8.91□□□□□ -0.98
HERPUD1-208ENST00000563911 GHRHP01286 108 aa8.91□□□□□ -0.98
HERPUD1-208ENST00000563911 ACPPP15309 386 aa8.91□□□□□ -0.98
HERPUD1-208ENST00000563911 ADH6P28332 368 aa8.91□□□□□ -0.98
HERPUD1-208ENST00000563911 MAP2K3P46734 347 aa8.91□□□□□ -0.98
HERPUD1-208ENST00000563911 SLC16A10Q8TF71 515 aa8.91□□□□□ -0.98
HERPUD1-208ENST00000563911 CRELD1Q96HD1 420 aa8.91□□□□□ -0.98
HERPUD1-208ENST00000563911 ZKSCAN3Q9BRR0 538 aa8.91□□□□□ -0.98
HERPUD1-208ENST00000563911 RBSNQ9H1K0 784 aa8.91□□□□□ -0.98
HERPUD1-208ENST00000563911 LIN7BQ9HAP6 207 aa8.91□□□□□ -0.98
HERPUD1-208ENST00000563911 DUOX2Q9NRD8 1548 aa8.9□□□□□ -0.98
HERPUD1-208ENST00000563911 LRRC9Q6ZRR7 1453 aa8.9□□□□□ -0.98
HERPUD1-208ENST00000563911 NOS1P29475 1434 aa8.9□□□□□ -0.98
HERPUD1-208ENST00000563911 TERTO14746 1132 aaKnown RBP8.9□□□□□ -0.98
HERPUD1-208ENST00000563911 TRPA1O75762 1119 aa8.9□□□□□ -0.98
HERPUD1-208ENST00000563911 CTSHP09668 335 aa8.9□□□□□ -0.98
HERPUD1-208ENST00000563911 USP17L7P0C7H9 530 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms