RNA–Protein interactions for RNA: ENST00000563741.5

SPSB3-204, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 5

Gene SPSB3, Length 1,746 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-204ENST00000563741 COA1Q9GZY4 146 aa23.27■■□□□ 1.32
SPSB3-204ENST00000563741 GJA3Q9Y6H8 435 aa23.27■■□□□ 1.32
SPSB3-204ENST00000563741 MYO5AQ9Y4I1 1855 aaKnown RBP23.27■■□□□ 1.32
SPSB3-204ENST00000563741 RBM25P49756 843 aaKnown RBP23.26■■□□□ 1.31
SPSB3-204ENST00000563741 MAP3K12Q12852 859 aa23.26■■□□□ 1.31
SPSB3-204ENST00000563741 ZSCAN25Q6NSZ9 544 aa23.26■■□□□ 1.31
SPSB3-204ENST00000563741 LSG1Q9H089 658 aaKnown RBP23.26■■□□□ 1.31
SPSB3-204ENST00000563741 HELLSQ9NRZ9 838 aa23.26■■□□□ 1.31
SPSB3-204ENST00000563741 ABCF2Q9UG63 623 aa23.26■■□□□ 1.31
SPSB3-204ENST00000563741 JAG2Q9Y219 1238 aa23.26■■□□□ 1.31
SPSB3-204ENST00000563741 MYH7P12883 1935 aa23.26■■□□□ 1.31
SPSB3-204ENST00000563741 MAST3O60307 1309 aa23.26■■□□□ 1.31
SPSB3-204ENST00000563741 MCMDC2Q4G0Z9 681 aa23.25■■□□□ 1.31
SPSB3-204ENST00000563741 APPBP2Q92624 585 aa23.25■■□□□ 1.31
SPSB3-204ENST00000563741 OSBP2Q969R2 916 aa23.25■■□□□ 1.31
SPSB3-204ENST00000563741 LRP2BPQ9P2M1 347 aa23.25■■□□□ 1.31
SPSB3-204ENST00000563741 TCRBV5S4A2TA0A5A2 114 aa23.25■■□□□ 1.31
SPSB3-204ENST00000563741 CXCL9Q07325 125 aa23.25■■□□□ 1.31
SPSB3-204ENST00000563741 UBE3CQ15386 1083 aa23.25■■□□□ 1.31
SPSB3-204ENST00000563741 SALL1Q9NSC2 1324 aa23.24■■□□□ 1.31
SPSB3-204ENST00000563741 CCDC129Q6ZRS4 1044 aa23.24■■□□□ 1.31
SPSB3-204ENST00000563741 HACL1Q9UJ83 578 aa23.24■■□□□ 1.31
SPSB3-204ENST00000563741 ZNF532Q9HCE3 1301 aa23.24■■□□□ 1.31
SPSB3-204ENST00000563741 M0R2C6 588 aa23.23■■□□□ 1.31
SPSB3-204ENST00000563741 EPB41L2O43491 1005 aaKnown RBP23.23■■□□□ 1.31
SPSB3-204ENST00000563741 TNIP1Q15025 636 aa23.23■■□□□ 1.31
SPSB3-204ENST00000563741 CIAPIN1Q6FI81 312 aa23.23■■□□□ 1.31
SPSB3-204ENST00000563741 KIAA1211Q6ZU35 1233 aa23.23■■□□□ 1.31
SPSB3-204ENST00000563741 MAGEB6Q8N7X4 407 aa23.23■■□□□ 1.31
SPSB3-204ENST00000563741 WDR66Q8TBY9 1149 aa23.23■■□□□ 1.31
SPSB3-204ENST00000563741 DBNDD1Q9H9R9 158 aa23.23■■□□□ 1.31
SPSB3-204ENST00000563741 CCDC171Q6TFL3 1326 aa23.23■■□□□ 1.31
SPSB3-204ENST00000563741 FSTL1Q12841 308 aa23.22■■□□□ 1.31
SPSB3-204ENST00000563741 PUS7LQ9H0K6 701 aaKnown RBP23.22■■□□□ 1.31
SPSB3-204ENST00000563741 TAF1DQ9H5J8 278 aaPredicted RBP23.22■■□□□ 1.31
SPSB3-204ENST00000563741 YDJCA8MPS7 323 aa23.22■■□□□ 1.31
SPSB3-204ENST00000563741 G3V3G9 751 aa23.22■■□□□ 1.31
SPSB3-204ENST00000563741 RAD17O75943 681 aa23.22■■□□□ 1.31
SPSB3-204ENST00000563741 PRDX5P30044 214 aa23.22■■□□□ 1.31
SPSB3-204ENST00000563741 PTH1RQ03431 593 aa23.22■■□□□ 1.31
SPSB3-204ENST00000563741 DOK7Q18PE1 504 aa23.22■■□□□ 1.31
SPSB3-204ENST00000563741 DCAF8Q5TAQ9 597 aa23.22■■□□□ 1.31
SPSB3-204ENST00000563741 SMC1BQ8NDV3 1235 aa23.22■■□□□ 1.31
SPSB3-204ENST00000563741 RAI14Q9P0K7 980 aa23.22■■□□□ 1.31
SPSB3-204ENST00000563741 ECE2O60344 883 aa23.21■■□□□ 1.31
SPSB3-204ENST00000563741 LMOD1P29536 600 aaPredicted RBP23.2■■□□□ 1.3
SPSB3-204ENST00000563741 ZGPATQ8N5A5 531 aaKnown RBP23.2■■□□□ 1.3
SPSB3-204ENST00000563741 ZNF384Q8TF68 577 aa23.2■■□□□ 1.3
SPSB3-204ENST00000563741 FAM205AQ6ZU69 1335 aa23.2■■□□□ 1.3
SPSB3-204ENST00000563741 EPHX2P34913 555 aa23.19■■□□□ 1.3
SPSB3-204ENST00000563741 ERICH6Q7L0X2 663 aa23.19■■□□□ 1.3
SPSB3-204ENST00000563741 SCNN1DP51172 638 aa23.19■■□□□ 1.3
SPSB3-204ENST00000563741 NSUN4Q96CB9 384 aaKnown RBP23.19■■□□□ 1.3
SPSB3-204ENST00000563741 MAST2Q6P0Q8 1798 aa23.18■■□□□ 1.3
SPSB3-204ENST00000563741 MECOMQ03112 1051 aa23.18■■□□□ 1.3
SPSB3-204ENST00000563741 PODNQ7Z5L7 613 aa23.18■■□□□ 1.3
SPSB3-204ENST00000563741 ADGRA1Q86SQ6 560 aa23.18■■□□□ 1.3
SPSB3-204ENST00000563741 MAP4K1Q92918 833 aa23.18■■□□□ 1.3
SPSB3-204ENST00000563741 GPAA1O43292 621 aa23.17■■□□□ 1.3
SPSB3-204ENST00000563741 HSPA6P17066 643 aa23.17■■□□□ 1.3
SPSB3-204ENST00000563741 GTF2IP78347 998 aa23.17■■□□□ 1.3
SPSB3-204ENST00000563741 GRIK5Q16478 980 aa23.17■■□□□ 1.3
SPSB3-204ENST00000563741 MFSD14BQ5SR56 506 aa23.17■■□□□ 1.3
SPSB3-204ENST00000563741 SPTY2D1Q68D10 685 aaPredicted RBP23.17■■□□□ 1.3
SPSB3-204ENST00000563741 KIF2CQ99661 725 aa23.17■■□□□ 1.3
SPSB3-204ENST00000563741 CYP7A1P22680 504 aa23.16■■□□□ 1.3
SPSB3-204ENST00000563741 HSPA4P34932 840 aa23.16■■□□□ 1.3
SPSB3-204ENST00000563741 GMPSP49915 693 aaPredicted RBP23.16■■□□□ 1.3
SPSB3-204ENST00000563741 VPS53Q5VIR6 699 aa23.16■■□□□ 1.3
SPSB3-204ENST00000563741 PNMA8AQ86V59 439 aaPredicted RBP23.16■■□□□ 1.3
SPSB3-204ENST00000563741 TBC1D22AQ8WUA7 517 aa23.16■■□□□ 1.3
SPSB3-204ENST00000563741 SCN9AQ15858 1988 aa23.16■■□□□ 1.3
SPSB3-204ENST00000563741 PSMD14O00487 310 aa23.16■■□□□ 1.3
SPSB3-204ENST00000563741 IGSF3O75054 1194 aa23.16■■□□□ 1.3
SPSB3-204ENST00000563741 LDHBP07195 334 aaKnown RBP23.16■■□□□ 1.3
SPSB3-204ENST00000563741 MCCP23508 829 aa23.16■■□□□ 1.3
SPSB3-204ENST00000563741 ANP32AP39687 249 aaKnown RBP23.16■■□□□ 1.3
SPSB3-204ENST00000563741 EPS15P42566 896 aa23.16■■□□□ 1.3
SPSB3-204ENST00000563741 NAA16Q6N069 864 aaPredicted RBP23.16■■□□□ 1.3
SPSB3-204ENST00000563741 LDHDQ86WU2 507 aa23.16■■□□□ 1.3
SPSB3-204ENST00000563741 GPRC5DQ9NZD1 345 aa23.16■■□□□ 1.3
SPSB3-204ENST00000563741 PALD1Q9ULE6 856 aa23.16■■□□□ 1.3
SPSB3-204ENST00000563741 RBM8AQ9Y5S9 174 aaKnown RBP23.16■■□□□ 1.3
SPSB3-204ENST00000563741 FOXP2O15409 715 aa23.15■■□□□ 1.3
SPSB3-204ENST00000563741 EAPPQ56P03 285 aaPredicted RBP23.15■■□□□ 1.3
SPSB3-204ENST00000563741 CHADLQ6NUI6 762 aa23.15■■□□□ 1.3
SPSB3-204ENST00000563741 TMED8Q6PL24 325 aaPredicted RBP23.15■■□□□ 1.3
SPSB3-204ENST00000563741 DZIP1Q86YF9 867 aaKnown RBP23.15■■□□□ 1.3
SPSB3-204ENST00000563741 KCNQ5Q9NR82 932 aa23.15■■□□□ 1.3
SPSB3-204ENST00000563741 PSME4Q14997 1843 aa23.14■■□□□ 1.3
SPSB3-204ENST00000563741 POTEIP0CG38 1075 aa23.14■■□□□ 1.3
SPSB3-204ENST00000563741 POTEJP0CG39 1038 aa23.14■■□□□ 1.3
SPSB3-204ENST00000563741 HSPD1P10809 573 aaKnown RBP23.14■■□□□ 1.3
SPSB3-204ENST00000563741 TTLL5Q6EMB2 1281 aa23.14■■□□□ 1.3
SPSB3-204ENST00000563741 AIDAQ96BJ3 306 aa23.14■■□□□ 1.3
SPSB3-204ENST00000563741 DSCC1Q9BVC3 393 aa23.14■■□□□ 1.3
SPSB3-204ENST00000563741 MBD4O95243 580 aa23.13■■□□□ 1.29
SPSB3-204ENST00000563741 MIGA1Q8NAN2 632 aa23.13■■□□□ 1.29
SPSB3-204ENST00000563741 NECTIN1Q15223 517 aa23.13■■□□□ 1.29
SPSB3-204ENST00000563741 CERS5Q8N5B7 392 aa23.13■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms