RNA–Protein interactions for RNA: ENST00000563560.1

RPUSD1-204, Transcript of RNA pseudouridylate synthase domain containing 1, humanhuman

TSL 2

Gene RPUSD1, Length 587 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD1-204ENST00000563560 RASGRF1Q13972 1273 aa18.34■□□□□ 0.53
RPUSD1-204ENST00000563560 ZIC5Q96T25 663 aa18.34■□□□□ 0.53
RPUSD1-204ENST00000563560 GPR108Q9NPR9 543 aa18.34■□□□□ 0.53
RPUSD1-204ENST00000563560 CLRN2A0PK11 232 aa18.33■□□□□ 0.52
RPUSD1-204ENST00000563560 AOC2O75106 756 aa18.33■□□□□ 0.52
RPUSD1-204ENST00000563560 MS4A1P11836 297 aa18.33■□□□□ 0.52
RPUSD1-204ENST00000563560 PRDX5P30044 214 aa18.33■□□□□ 0.52
RPUSD1-204ENST00000563560 FKBP1BP68106 108 aa18.33■□□□□ 0.52
RPUSD1-204ENST00000563560 PDE3AQ14432 1141 aa18.33■□□□□ 0.52
RPUSD1-204ENST00000563560 APOBEC3HQ6NTF7 200 aaKnown RBP18.33■□□□□ 0.52
RPUSD1-204ENST00000563560 MOB2Q70IA6 237 aa18.33■□□□□ 0.52
RPUSD1-204ENST00000563560 WDR66Q8TBY9 1149 aa18.33■□□□□ 0.52
RPUSD1-204ENST00000563560 ZDHHC15Q96MV8 337 aa18.33■□□□□ 0.52
RPUSD1-204ENST00000563560 TEPSINQ96N21 525 aa18.33■□□□□ 0.52
RPUSD1-204ENST00000563560 DEFB129Q9H1M3 183 aa18.33■□□□□ 0.52
RPUSD1-204ENST00000563560 ZNF70Q9UC06 446 aaPredicted RBP18.33■□□□□ 0.52
RPUSD1-204ENST00000563560 AKAP2Q9Y2D5 859 aa18.33■□□□□ 0.52
RPUSD1-204ENST00000563560 COG6Q9Y2V7 657 aa18.33■□□□□ 0.52
RPUSD1-204ENST00000563560 MAST2Q6P0Q8 1798 aa18.32■□□□□ 0.52
RPUSD1-204ENST00000563560 HHIPL2Q6UWX4 724 aa18.32■□□□□ 0.52
RPUSD1-204ENST00000563560 C2orf69Q8N8R5 385 aa18.32■□□□□ 0.52
RPUSD1-204ENST00000563560 ZNF384Q8TF68 577 aa18.32■□□□□ 0.52
RPUSD1-204ENST00000563560 DDX19BQ9UMR2 479 aa18.32■□□□□ 0.52
RPUSD1-204ENST00000563560 PPP2R3BQ9Y5P8 575 aa18.32■□□□□ 0.52
RPUSD1-204ENST00000563560 DOCK2Q92608 1830 aa18.32■□□□□ 0.52
RPUSD1-204ENST00000563560 CDK5RAP2Q96SN8 1893 aa18.31■□□□□ 0.52
RPUSD1-204ENST00000563560 FOXN1O15353 648 aa18.31■□□□□ 0.52
RPUSD1-204ENST00000563560 ARID4AP29374 1257 aaPredicted RBP18.31■□□□□ 0.52
RPUSD1-204ENST00000563560 MAP2K2P36507 400 aa18.31■□□□□ 0.52
RPUSD1-204ENST00000563560 ECE1P42892 770 aa18.31■□□□□ 0.52
RPUSD1-204ENST00000563560 G3BP1Q13283 466 aaKnown RBP eCLIP18.31■□□□□ 0.52
RPUSD1-204ENST00000563560 MAP3K11Q16584 847 aa18.31■□□□□ 0.52
RPUSD1-204ENST00000563560 RGMBQ6NW40 437 aa18.31■□□□□ 0.52
RPUSD1-204ENST00000563560 CDAN1Q8IWY9 1227 aa18.31■□□□□ 0.52
RPUSD1-204ENST00000563560 TDRD3Q9H7E2 651 aaKnown RBP18.31■□□□□ 0.52
RPUSD1-204ENST00000563560 DENND2AQ9ULE3 1009 aa18.31■□□□□ 0.52
RPUSD1-204ENST00000563560 FRAT2O75474 233 aaPredicted RBP18.3■□□□□ 0.52
RPUSD1-204ENST00000563560 SLC10A3P09131 477 aa18.3■□□□□ 0.52
RPUSD1-204ENST00000563560 TNNI3KQ59H18 835 aa18.3■□□□□ 0.52
RPUSD1-204ENST00000563560 FPGT-TNNI3KV9GXZ4 949 aa18.3■□□□□ 0.52
RPUSD1-204ENST00000563560 RFX7Q2KHR2 1363 aa18.3■□□□□ 0.52
RPUSD1-204ENST00000563560 SURF6O75683 361 aaKnown RBP18.29■□□□□ 0.52
RPUSD1-204ENST00000563560 LDLRAD1Q5T700 205 aa18.29■□□□□ 0.52
RPUSD1-204ENST00000563560 RASAL3Q86YV0 1011 aa18.29■□□□□ 0.52
RPUSD1-204ENST00000563560 TEKT1Q969V4 418 aa18.29■□□□□ 0.52
RPUSD1-204ENST00000563560 GNL3LQ9NVN8 582 aaKnown RBP18.29■□□□□ 0.52
RPUSD1-204ENST00000563560 HMG20BQ9P0W2 317 aa18.29■□□□□ 0.52
RPUSD1-204ENST00000563560 DAGLAQ9Y4D2 1042 aa18.29■□□□□ 0.52
RPUSD1-204ENST00000563560 GAKO14976 1311 aa18.28■□□□□ 0.52
RPUSD1-204ENST00000563560 MAST3O60307 1309 aa18.28■□□□□ 0.52
RPUSD1-204ENST00000563560 MCAMP43121 646 aa18.28■□□□□ 0.52
RPUSD1-204ENST00000563560 RASA3Q14644 834 aa18.28■□□□□ 0.52
RPUSD1-204ENST00000563560 DIXDC1Q155Q3 683 aa18.28■□□□□ 0.52
RPUSD1-204ENST00000563560 NBPF12Q5TAG4 269 aaPredicted RBP18.28■□□□□ 0.52
RPUSD1-204ENST00000563560 PI16Q6UXB8 463 aa18.28■□□□□ 0.52
RPUSD1-204ENST00000563560 RPAP2Q8IXW5 612 aaPredicted RBP18.28■□□□□ 0.52
RPUSD1-204ENST00000563560 DBNDD2Q9BQY9 259 aa18.28■□□□□ 0.52
RPUSD1-204ENST00000563560 FZD1Q9UP38 647 aa18.28■□□□□ 0.52
RPUSD1-204ENST00000563560 FOCADQ5VW36 1801 aa18.28■□□□□ 0.52
RPUSD1-204ENST00000563560 UBE2Q2LH0YL09 131 aa18.27■□□□□ 0.52
RPUSD1-204ENST00000563560 MYO1BO43795 1136 aa18.27■□□□□ 0.52
RPUSD1-204ENST00000563560 RBM5P52756 815 aaKnown RBP eCLIP18.27■□□□□ 0.522e-6■■□□□ 12.9
RPUSD1-204ENST00000563560 FKBP1CQ5VVH2 108 aa18.27■□□□□ 0.52
RPUSD1-204ENST00000563560 EAF2Q96CJ1 260 aaPredicted RBP18.27■□□□□ 0.52
RPUSD1-204ENST00000563560 ZNF512BQ96KM6 892 aaPredicted RBP18.27■□□□□ 0.52
RPUSD1-204ENST00000563560 TLR7Q9NYK1 1049 aaKnown RBP18.27■□□□□ 0.52
RPUSD1-204ENST00000563560 DBNLQ9UJU6 430 aaKnown RBP18.27■□□□□ 0.52
RPUSD1-204ENST00000563560 MAP2K1Q02750 393 aaPredicted RBP18.26■□□□□ 0.51
RPUSD1-204ENST00000563560 NOGQ13253 232 aa18.26■□□□□ 0.51
RPUSD1-204ENST00000563560 CCDC102AQ96A19 550 aa18.26■□□□□ 0.51
RPUSD1-204ENST00000563560 FAM163AQ96GL9 167 aaPredicted RBP18.26■□□□□ 0.51
RPUSD1-204ENST00000563560 NEUROD6Q96NK8 337 aa18.26■□□□□ 0.51
RPUSD1-204ENST00000563560 VEZTQ9HBM0 779 aa18.26■□□□□ 0.51
RPUSD1-204ENST00000563560 EXOC6BQ9Y2D4 811 aa18.26■□□□□ 0.51
RPUSD1-204ENST00000563560 RPAP1Q9BWH6 1393 aaPredicted RBP18.26■□□□□ 0.51
RPUSD1-204ENST00000563560 HSPA8P11142 646 aaKnown RBP18.25■□□□□ 0.51
RPUSD1-204ENST00000563560 ZNF157P51786 506 aaPredicted RBP18.25■□□□□ 0.51
RPUSD1-204ENST00000563560 CACNB3P54284 484 aa18.25■□□□□ 0.51
RPUSD1-204ENST00000563560 COL13A1Q5TAT6 717 aaPredicted RBP18.25■□□□□ 0.51
RPUSD1-204ENST00000563560 SPATA5Q8NB90 893 aa18.25■□□□□ 0.51
RPUSD1-204ENST00000563560 USP2O75604 605 aaPredicted RBP18.24■□□□□ 0.51
RPUSD1-204ENST00000563560 LDHBP07195 334 aaKnown RBP18.24■□□□□ 0.51
RPUSD1-204ENST00000563560 CDC42EP5Q6NZY7 148 aa18.24■□□□□ 0.51
RPUSD1-204ENST00000563560 PAXIP1Q6ZW49 1069 aaPredicted RBP18.24■□□□□ 0.51
RPUSD1-204ENST00000563560 FAM83AQ86UY5 434 aa18.24■□□□□ 0.51
RPUSD1-204ENST00000563560 TMEM39BQ9GZU3 492 aa18.24■□□□□ 0.51
RPUSD1-204ENST00000563560 SIPA1L1O43166 1804 aa18.23■□□□□ 0.51
RPUSD1-204ENST00000563560 ATRNL1Q5VV63 1379 aa18.23■□□□□ 0.51
RPUSD1-204ENST00000563560 TCP10L2B9ZVM9 353 aa18.23■□□□□ 0.51
RPUSD1-204ENST00000563560 KIF23Q02241 960 aaPredicted RBP18.23■□□□□ 0.51
RPUSD1-204ENST00000563560 GRM1Q13255 1194 aa18.23■□□□□ 0.51
RPUSD1-204ENST00000563560 TNFAIP1Q13829 316 aa18.23■□□□□ 0.51
RPUSD1-204ENST00000563560 UQCRFS1P1P0C7P4 283 aa18.22■□□□□ 0.51
RPUSD1-204ENST00000563560 NFIAQ12857 509 aa18.22■□□□□ 0.51
RPUSD1-204ENST00000563560 TBC1D9Q6ZT07 1266 aa18.22■□□□□ 0.51
RPUSD1-204ENST00000563560 ZGPATQ8N5A5 531 aaKnown RBP18.22■□□□□ 0.51
RPUSD1-204ENST00000563560 NSUN4Q96CB9 384 aaKnown RBP18.22■□□□□ 0.51
RPUSD1-204ENST00000563560 CSRNP1Q96S65 589 aa18.22■□□□□ 0.51
RPUSD1-204ENST00000563560 FAM198AQ9UFP1 575 aa18.22■□□□□ 0.51
RPUSD1-204ENST00000563560 CASP8AP2Q9UKL3 1982 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms