RNA–Protein interactions for RNA: ENST00000563275.1

PKM-208, Transcript of pyruvate kinase M1/2, humanhuman

TSL 1 (best)

Gene PKM, Length 699 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKM-208ENST00000563275 TSKSQ9UJT2 592 aa15.65■□□□□ 0.1
PKM-208ENST00000563275 CHAF1AQ13111 956 aaPredicted RBP15.64■□□□□ 0.09
PKM-208ENST00000563275 RASA3Q14644 834 aa15.64■□□□□ 0.09
PKM-208ENST00000563275 TMEM57Q8N5G2 664 aa15.64■□□□□ 0.09
PKM-208ENST00000563275 FRAT1Q92837 279 aaPredicted RBP15.64■□□□□ 0.09
PKM-208ENST00000563275 ZDHHC15Q96MV8 337 aa15.64■□□□□ 0.09
PKM-208ENST00000563275 UNCXA6NJT0 531 aa15.63■□□□□ 0.09
PKM-208ENST00000563275 SRGAP3O43295 1099 aa15.63■□□□□ 0.09
PKM-208ENST00000563275 ARMC9Q7Z3E5 817 aa15.63■□□□□ 0.09
PKM-208ENST00000563275 CLUAP1Q96AJ1 413 aa15.63■□□□□ 0.09
PKM-208ENST00000563275 TEPSINQ96N21 525 aa15.63■□□□□ 0.09
PKM-208ENST00000563275 TDRD3Q9H7E2 651 aaKnown RBP15.63■□□□□ 0.09
PKM-208ENST00000563275 RNF186Q9NXI6 227 aa15.63■□□□□ 0.09
PKM-208ENST00000563275 GNAI2P04899 355 aa15.62■□□□□ 0.09
PKM-208ENST00000563275 RBM5P52756 815 aaKnown RBP eCLIP15.62■□□□□ 0.09
PKM-208ENST00000563275 NBPF12Q5TAG4 269 aaPredicted RBP15.62■□□□□ 0.09
PKM-208ENST00000563275 APOBEC3HQ6NTF7 200 aaKnown RBP15.62■□□□□ 0.09
PKM-208ENST00000563275 WDR66Q8TBY9 1149 aa15.62■□□□□ 0.09
PKM-208ENST00000563275 VEZTQ9HBM0 779 aa15.62■□□□□ 0.09
PKM-208ENST00000563275 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.62■□□□□ 0.09
PKM-208ENST00000563275 SALL1Q9NSC2 1324 aa15.62■□□□□ 0.09
PKM-208ENST00000563275 PNMA6EA0A0J9YXQ4 647 aa15.61■□□□□ 0.09
PKM-208ENST00000563275 SEMA3EO15041 775 aa15.61■□□□□ 0.09
PKM-208ENST00000563275 FRAT2O75474 233 aaPredicted RBP15.61■□□□□ 0.09
PKM-208ENST00000563275 RLBP1P12271 317 aa15.61■□□□□ 0.09
PKM-208ENST00000563275 ADORA1P30542 326 aa15.61■□□□□ 0.09
PKM-208ENST00000563275 PHKA1P46020 1223 aa15.61■□□□□ 0.09
PKM-208ENST00000563275 TNFAIP1Q13829 316 aa15.61■□□□□ 0.09
PKM-208ENST00000563275 TTLL12Q14166 644 aaPredicted RBP15.61■□□□□ 0.09
PKM-208ENST00000563275 SUPT20HL1Q3ZLR7 823 aa15.61■□□□□ 0.09
PKM-208ENST00000563275 HHIPL2Q6UWX4 724 aa15.61■□□□□ 0.09
PKM-208ENST00000563275 CDAN1Q8IWY9 1227 aa15.61■□□□□ 0.09
PKM-208ENST00000563275 TEKT1Q969V4 418 aa15.61■□□□□ 0.09
PKM-208ENST00000563275 ANGEL1Q9UNK9 670 aaKnown RBP15.61■□□□□ 0.09
PKM-208ENST00000563275 FZD1Q9UP38 647 aa15.61■□□□□ 0.09
PKM-208ENST00000563275 MAST3O60307 1309 aa15.61■□□□□ 0.09
PKM-208ENST00000563275 PDS5AQ29RF7 1337 aaKnown RBP15.61■□□□□ 0.09
PKM-208ENST00000563275 USP2O75604 605 aaPredicted RBP15.6■□□□□ 0.09
PKM-208ENST00000563275 TM4SF4P48230 202 aa15.6■□□□□ 0.09
PKM-208ENST00000563275 POLA2Q14181 598 aa15.6■□□□□ 0.09
PKM-208ENST00000563275 FKBP1CQ5VVH2 108 aa15.6■□□□□ 0.09
PKM-208ENST00000563275 SPRYD7Q5W111 196 aa15.6■□□□□ 0.09
PKM-208ENST00000563275 CCDC102BQ68D86 513 aa15.6■□□□□ 0.09
PKM-208ENST00000563275 PPP1R12BO60237 982 aaPredicted RBP15.59■□□□□ 0.09
PKM-208ENST00000563275 PRKG1Q13976 671 aa15.59■□□□□ 0.09
PKM-208ENST00000563275 LAMB1P07942 1786 aa15.59■□□□□ 0.09
PKM-208ENST00000563275 A0A1B0GUL7 405 aa15.58■□□□□ 0.08
PKM-208ENST00000563275 ZBTB7BO15156 539 aaPredicted RBP15.58■□□□□ 0.08
PKM-208ENST00000563275 TRPA1O75762 1119 aa15.58■□□□□ 0.08
PKM-208ENST00000563275 PRDX5P30044 214 aa15.58■□□□□ 0.08
PKM-208ENST00000563275 TIMM10P62072 90 aa15.58■□□□□ 0.08
PKM-208ENST00000563275 TFCP2Q12800 502 aa15.58■□□□□ 0.08
PKM-208ENST00000563275 RASGRF1Q13972 1273 aa15.58■□□□□ 0.08
PKM-208ENST00000563275 FAM83AQ86UY5 434 aa15.58■□□□□ 0.08
PKM-208ENST00000563275 CLMNQ96JQ2 1002 aa15.58■□□□□ 0.08
PKM-208ENST00000563275 CFHR5Q9BXR6 569 aa15.58■□□□□ 0.08
PKM-208ENST00000563275 TMEM39BQ9GZU3 492 aa15.58■□□□□ 0.08
PKM-208ENST00000563275 GNL3LQ9NVN8 582 aaKnown RBP15.58■□□□□ 0.08
PKM-208ENST00000563275 DENND2AQ9ULE3 1009 aa15.58■□□□□ 0.08
PKM-208ENST00000563275 RPAP1Q9BWH6 1393 aaPredicted RBP15.58■□□□□ 0.08
PKM-208ENST00000563275 MYH13Q9UKX3 1938 aa15.57■□□□□ 0.08
PKM-208ENST00000563275 TCP10L2B9ZVM9 353 aa15.57■□□□□ 0.08
PKM-208ENST00000563275 SSH3Q8TE77 659 aa15.57■□□□□ 0.08
PKM-208ENST00000563275 ABHD8Q96I13 439 aa15.57■□□□□ 0.08
PKM-208ENST00000563275 AKAP2Q9Y2D5 859 aa15.57■□□□□ 0.08
PKM-208ENST00000563275 DAGLAQ9Y4D2 1042 aa15.57■□□□□ 0.08
PKM-208ENST00000563275 AKAP11Q9UKA4 1901 aa15.56■□□□□ 0.08
PKM-208ENST00000563275 CASP8AP2Q9UKL3 1982 aa15.56■□□□□ 0.08
PKM-208ENST00000563275 ZBTB48P10074 688 aaPredicted RBP15.56■□□□□ 0.08
PKM-208ENST00000563275 GJA5P36382 358 aa15.56■□□□□ 0.08
PKM-208ENST00000563275 IREB2P48200 963 aaKnown RBP15.56■□□□□ 0.08
PKM-208ENST00000563275 TNNI2P48788 182 aa15.56■□□□□ 0.08
PKM-208ENST00000563275 CACNB3P54284 484 aa15.56■□□□□ 0.08
PKM-208ENST00000563275 NOM1Q5C9Z4 860 aaKnown RBP15.56■□□□□ 0.08
PKM-208ENST00000563275 XAGE2Q96GT9 111 aa15.56■□□□□ 0.08
PKM-208ENST00000563275 WNK4Q96J92 1243 aa15.56■□□□□ 0.08
PKM-208ENST00000563275 OTOFQ9HC10 1997 aa15.55■□□□□ 0.08
PKM-208ENST00000563275 RFX7Q2KHR2 1363 aa15.55■□□□□ 0.08
PKM-208ENST00000563275 GAKO14976 1311 aa15.55■□□□□ 0.08
PKM-208ENST00000563275 CAPN15O75808 1086 aa15.55■□□□□ 0.08
PKM-208ENST00000563275 ATP8B2P98198 1209 aa15.55■□□□□ 0.08
PKM-208ENST00000563275 SREBF2Q12772 1141 aa15.55■□□□□ 0.08
PKM-208ENST00000563275 MVPQ14764 893 aaKnown RBP15.55■□□□□ 0.08
PKM-208ENST00000563275 DIXDC1Q155Q3 683 aa15.55■□□□□ 0.08
PKM-208ENST00000563275 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.55■□□□□ 0.08
PKM-208ENST00000563275 ANKRD13AQ8IZ07 590 aa15.55■□□□□ 0.08
PKM-208ENST00000563275 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.55■□□□□ 0.08
PKM-208ENST00000563275 SLC10A4Q96EP9 437 aa15.55■□□□□ 0.08
PKM-208ENST00000563275 MANSC4A6NHS7 340 aaPredicted RBP15.54■□□□□ 0.08
PKM-208ENST00000563275 LDHBP07195 334 aaKnown RBP15.54■□□□□ 0.08
PKM-208ENST00000563275 MKRN3Q13064 507 aaKnown RBP15.54■□□□□ 0.08
PKM-208ENST00000563275 CDC42EP5Q6NZY7 148 aa15.54■□□□□ 0.08
PKM-208ENST00000563275 FTSJ3Q8IY81 847 aaKnown RBP15.54■□□□□ 0.08
PKM-208ENST00000563275 FAM163AQ96GL9 167 aaPredicted RBP15.54■□□□□ 0.08
PKM-208ENST00000563275 NOP58Q9Y2X3 529 aaKnown RBP15.54■□□□□ 0.08
PKM-208ENST00000563275 TESPA1A2RU30 521 aaPredicted RBP15.53■□□□□ 0.08
PKM-208ENST00000563275 ARID4AP29374 1257 aaPredicted RBP15.53■□□□□ 0.08
PKM-208ENST00000563275 INHBEP58166 350 aa15.53■□□□□ 0.08
PKM-208ENST00000563275 ZGPATQ8N5A5 531 aaKnown RBP15.53■□□□□ 0.08
PKM-208ENST00000563275 MCOLN1Q9GZU1 580 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms