RNA–Protein interactions for RNA: ENST00000563235.5

SMG1-207, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,910 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-207ENST00000563235 CHMP4CQ96CF2 233 aa5.65□□□□□ -1.5
SMG1-207ENST00000563235 CGNQ9P2M7 1197 aaKnown RBP5.65□□□□□ -1.5
SMG1-207ENST00000563235 CD2APQ9Y5K6 639 aa5.65□□□□□ -1.5
SMG1-207ENST00000563235 KLRG2A4D1S0 409 aaPredicted RBP5.65□□□□□ -1.51
SMG1-207ENST00000563235 H0Y3Z8 333 aa5.65□□□□□ -1.51
SMG1-207ENST00000563235 HTATSF1O43719 755 aaKnown RBP5.65□□□□□ -1.51
SMG1-207ENST00000563235 ENPP1P22413 925 aa5.65□□□□□ -1.51
SMG1-207ENST00000563235 HSD17B7P56937 341 aa5.65□□□□□ -1.51
SMG1-207ENST00000563235 FKBP4Q02790 459 aaKnown RBP eCLIP5.65□□□□□ -1.51
SMG1-207ENST00000563235 NCOA4Q13772 614 aa5.65□□□□□ -1.51
SMG1-207ENST00000563235 TRIM29Q14134 588 aa5.65□□□□□ -1.51
SMG1-207ENST00000563235 DSC3Q14574 896 aa5.65□□□□□ -1.51
SMG1-207ENST00000563235 HOMER1Q86YM7 354 aa5.65□□□□□ -1.51
SMG1-207ENST00000563235 KIAA0825Q8IV33 1275 aa5.65□□□□□ -1.51
SMG1-207ENST00000563235 BRSK2Q8IWQ3 736 aa5.65□□□□□ -1.51
SMG1-207ENST00000563235 SLAIN1Q8ND83 568 aa5.65□□□□□ -1.51
SMG1-207ENST00000563235 SCLT1Q96NL6 688 aa5.65□□□□□ -1.51
SMG1-207ENST00000563235 FMNL2Q96PY5 1086 aa5.65□□□□□ -1.51
SMG1-207ENST00000563235 SPAG5Q96R06 1193 aa5.65□□□□□ -1.51
SMG1-207ENST00000563235 AP1M1Q9BXS5 423 aa5.65□□□□□ -1.51
SMG1-207ENST00000563235 TRIM55Q9BYV6 548 aa5.65□□□□□ -1.51
SMG1-207ENST00000563235 SMYD2Q9NRG4 433 aa5.65□□□□□ -1.51
SMG1-207ENST00000563235 CXXC1Q9P0U4 656 aaPredicted RBP5.65□□□□□ -1.51
SMG1-207ENST00000563235 XPO7Q9UIA9 1087 aaKnown RBP5.65□□□□□ -1.51
SMG1-207ENST00000563235 SNX5Q9Y5X3 404 aa5.65□□□□□ -1.51
SMG1-207ENST00000563235 ANP32AP39687 249 aaKnown RBP5.64□□□□□ -1.51
SMG1-207ENST00000563235 KIAA2012Q0VF49 1180 aa5.64□□□□□ -1.51
SMG1-207ENST00000563235 TAF1CQ15572 869 aaPredicted RBP5.64□□□□□ -1.51
SMG1-207ENST00000563235 SWI5Q1ZZU3 235 aa5.64□□□□□ -1.51
SMG1-207ENST00000563235 CCDC158Q5M9N0 1113 aa5.64□□□□□ -1.51
SMG1-207ENST00000563235 RTL10Q7L3V2 364 aa5.64□□□□□ -1.51
SMG1-207ENST00000563235 ENAHQ8N8S7 591 aaPredicted RBP5.64□□□□□ -1.51
SMG1-207ENST00000563235 TMEM121BQ9BXQ6 578 aaPredicted RBP5.64□□□□□ -1.51
SMG1-207ENST00000563235 RBM28Q9NW13 759 aaKnown RBP5.64□□□□□ -1.51
SMG1-207ENST00000563235 TRMT1Q9NXH9 659 aaKnown RBP5.64□□□□□ -1.51
SMG1-207ENST00000563235 SIRPGQ9P1W8 387 aa5.64□□□□□ -1.51
SMG1-207ENST00000563235 SNAPC4Q5SXM2 1469 aa5.64□□□□□ -1.51
SMG1-207ENST00000563235 IGHA2P01877 340 aa5.64□□□□□ -1.51
SMG1-207ENST00000563235 COPAP53621 1224 aa5.64□□□□□ -1.51
SMG1-207ENST00000563235 EHHADHQ08426 723 aa5.64□□□□□ -1.51
SMG1-207ENST00000563235 DCTN1Q14203 1278 aa5.64□□□□□ -1.51
SMG1-207ENST00000563235 MLC1Q15049 377 aa5.64□□□□□ -1.51
SMG1-207ENST00000563235 PKN2Q16513 984 aaKnown RBP5.64□□□□□ -1.51
SMG1-207ENST00000563235 TUSC1Q2TAM9 212 aa5.64□□□□□ -1.51
SMG1-207ENST00000563235 TUBB8Q3ZCM7 444 aa5.64□□□□□ -1.51
SMG1-207ENST00000563235 C16orf86Q6ZW13 317 aa5.64□□□□□ -1.51
SMG1-207ENST00000563235 RPGRQ92834 1020 aaKnown RBP5.64□□□□□ -1.51
SMG1-207ENST00000563235 CDH19Q9H159 772 aa5.64□□□□□ -1.51
SMG1-207ENST00000563235 PGAP2Q9UHJ9 254 aa5.64□□□□□ -1.51
SMG1-207ENST00000563235 CEP131Q9UPN4 1083 aa5.64□□□□□ -1.51
SMG1-207ENST00000563235 AQRO60306 1485 aaKnown RBP eCLIP5.64□□□□□ -1.511e-6■■■■■ 27.8
SMG1-207ENST00000563235 VSTM5A8MXK1 200 aa5.64□□□□□ -1.51
SMG1-207ENST00000563235 TPPPO94811 219 aa5.64□□□□□ -1.51
SMG1-207ENST00000563235 NR1H3Q13133 447 aa5.64□□□□□ -1.51
SMG1-207ENST00000563235 AGAP9Q5VTM2 703 aa5.64□□□□□ -1.51
SMG1-207ENST00000563235 THNSL2Q86YJ6 484 aa5.64□□□□□ -1.51
SMG1-207ENST00000563235 ATXN2LQ8WWM7 1075 aaKnown RBP5.64□□□□□ -1.51
SMG1-207ENST00000563235 PURBQ96QR8 312 aaKnown RBP5.64□□□□□ -1.51
SMG1-207ENST00000563235 RBCK1Q9BYM8 510 aa5.64□□□□□ -1.51
SMG1-207ENST00000563235 RRP15Q9Y3B9 282 aaKnown RBP5.64□□□□□ -1.51
SMG1-207ENST00000563235 IQSEC2Q5JU85 1478 aa5.63□□□□□ -1.51
SMG1-207ENST00000563235 KIF5CO60282 957 aa5.63□□□□□ -1.51
SMG1-207ENST00000563235 PCF11O94913 1555 aaKnown RBP5.63□□□□□ -1.51
SMG1-207ENST00000563235 RASGRP1O95267 797 aa5.63□□□□□ -1.51
SMG1-207ENST00000563235 CCDC175P0C221 793 aa5.63□□□□□ -1.51
SMG1-207ENST00000563235 GLI2P10070 1586 aa5.63□□□□□ -1.51
SMG1-207ENST00000563235 ROR1Q01973 937 aa5.63□□□□□ -1.51
SMG1-207ENST00000563235 PTPN14Q15678 1187 aa5.63□□□□□ -1.51
SMG1-207ENST00000563235 PARP10Q53GL7 1025 aa5.63□□□□□ -1.51
SMG1-207ENST00000563235 C1orf122Q6ZSJ8 110 aa5.63□□□□□ -1.51
SMG1-207ENST00000563235 CDAN1Q8IWY9 1227 aa5.63□□□□□ -1.51
SMG1-207ENST00000563235 NKAIN3Q8N8D7 197 aa5.63□□□□□ -1.51
SMG1-207ENST00000563235 PLPP7Q8NBV4 271 aa5.63□□□□□ -1.51
SMG1-207ENST00000563235 GPRASP2Q96D09 838 aa5.63□□□□□ -1.51
SMG1-207ENST00000563235 TRIM6Q9C030 488 aaPredicted RBP5.63□□□□□ -1.51
SMG1-207ENST00000563235 CCDC8Q9H0W5 538 aaPredicted RBP5.63□□□□□ -1.51
SMG1-207ENST00000563235 GTF2IRD1Q9UHL9 959 aa5.63□□□□□ -1.51
SMG1-207ENST00000563235 FBXO10Q9UK96 956 aa5.63□□□□□ -1.51
SMG1-207ENST00000563235 PPP1R9AQ9ULJ8 1098 aa5.63□□□□□ -1.51
SMG1-207ENST00000563235 WRNQ14191 1432 aaPredicted RBP eCLIP5.63□□□□□ -1.51
SMG1-207ENST00000563235 TMEM110-MUSTN1A8MSY1 372 aa5.63□□□□□ -1.51
SMG1-207ENST00000563235 TOR1BO14657 336 aa5.63□□□□□ -1.51
SMG1-207ENST00000563235 KIF1CO43896 1103 aaKnown RBP5.63□□□□□ -1.51
SMG1-207ENST00000563235 HTR3AP46098 478 aa5.63□□□□□ -1.51
SMG1-207ENST00000563235 NEK2P51955 445 aa5.63□□□□□ -1.51
SMG1-207ENST00000563235 DDX10Q13206 875 aaKnown RBP5.63□□□□□ -1.51
SMG1-207ENST00000563235 LAMC2Q13753 1193 aa5.63□□□□□ -1.51
SMG1-207ENST00000563235 DIXDC1Q155Q3 683 aa5.63□□□□□ -1.51
SMG1-207ENST00000563235 FAM180BQ6P0A1 224 aa5.63□□□□□ -1.51
SMG1-207ENST00000563235 LARP1Q6PKG0 1096 aaKnown RBP5.63□□□□□ -1.51
SMG1-207ENST00000563235 EEPD1Q7L9B9 569 aa5.63□□□□□ -1.51
SMG1-207ENST00000563235 ZNF354CQ86Y25 554 aa5.63□□□□□ -1.51
SMG1-207ENST00000563235 PARD3BQ8TEW8 1205 aa5.63□□□□□ -1.51
SMG1-207ENST00000563235 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.63□□□□□ -1.51
SMG1-207ENST00000563235 FAM167BQ9BTA0 163 aa5.63□□□□□ -1.51
SMG1-207ENST00000563235 NBPF3Q9H094 633 aa5.63□□□□□ -1.51
SMG1-207ENST00000563235 PPRC1Q5VV67 1664 aaKnown RBP5.63□□□□□ -1.51
SMG1-207ENST00000563235 WASLO00401 505 aaPredicted RBP5.62□□□□□ -1.51
SMG1-207ENST00000563235 APAF1O14727 1248 aa5.62□□□□□ -1.51
SMG1-207ENST00000563235 SSBP05455 408 aaKnown RBP eCLIP5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms