RNA–Protein interactions for RNA: ENST00000562874.2

SF3B3-203, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 401 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-203ENST00000562874 ZNF70Q9UC06 446 aaPredicted RBP19.64■□□□□ 0.73
SF3B3-203ENST00000562874 SERPINA10Q9UK55 444 aa19.64■□□□□ 0.73
SF3B3-203ENST00000562874 PPP2R3BQ9Y5P8 575 aa19.64■□□□□ 0.73
SF3B3-203ENST00000562874 TRIM27P14373 513 aa19.63■□□□□ 0.73
SF3B3-203ENST00000562874 DGKZQ13574 1117 aa19.63■□□□□ 0.73
SF3B3-203ENST00000562874 RASA3Q14644 834 aa19.63■□□□□ 0.73
SF3B3-203ENST00000562874 DZIP1LQ8IYY4 767 aaKnown RBP19.63■□□□□ 0.73
SF3B3-203ENST00000562874 CLMNQ96JQ2 1002 aa19.63■□□□□ 0.73
SF3B3-203ENST00000562874 MCOLN1Q9GZU1 580 aa19.63■□□□□ 0.73
SF3B3-203ENST00000562874 TCP10L2B9ZVM9 353 aa19.62■□□□□ 0.73
SF3B3-203ENST00000562874 CACNB3P54284 484 aa19.62■□□□□ 0.73
SF3B3-203ENST00000562874 ATP2B3Q16720 1220 aa19.62■□□□□ 0.73
SF3B3-203ENST00000562874 INTS3Q68E01 1043 aaKnown RBP19.62■□□□□ 0.73
SF3B3-203ENST00000562874 LPIN2Q92539 896 aa19.62■□□□□ 0.73
SF3B3-203ENST00000562874 CLUAP1Q96AJ1 413 aa19.62■□□□□ 0.73
SF3B3-203ENST00000562874 CDK5RAP2Q96SN8 1893 aa19.62■□□□□ 0.73
SF3B3-203ENST00000562874 MAST2Q6P0Q8 1798 aa19.62■□□□□ 0.73
SF3B3-203ENST00000562874 LDLRAD1Q5T700 205 aa19.61■□□□□ 0.73
SF3B3-203ENST00000562874 TBC1D22AQ8WUA7 517 aa19.61■□□□□ 0.73
SF3B3-203ENST00000562874 CIAO1O76071 339 aa19.6■□□□□ 0.73
SF3B3-203ENST00000562874 ARHGAP45Q92619 1136 aa19.6■□□□□ 0.73
SF3B3-203ENST00000562874 TMEM39BQ9GZU3 492 aa19.6■□□□□ 0.73
SF3B3-203ENST00000562874 CCDC85CA6NKD9 419 aa19.59■□□□□ 0.73
SF3B3-203ENST00000562874 PPP1R12BO60237 982 aaPredicted RBP19.59■□□□□ 0.73
SF3B3-203ENST00000562874 ADORA1P30542 326 aa19.59■□□□□ 0.73
SF3B3-203ENST00000562874 TNFAIP1Q13829 316 aa19.59■□□□□ 0.73
SF3B3-203ENST00000562874 ATF7IPQ6VMQ6 1270 aa19.59■□□□□ 0.73
SF3B3-203ENST00000562874 TEKT1Q969V4 418 aa19.59■□□□□ 0.73
SF3B3-203ENST00000562874 CEP126Q9P2H0 1117 aa19.59■□□□□ 0.73
SF3B3-203ENST00000562874 ZSWIM8A7E2V4 1837 aa19.59■□□□□ 0.73
SF3B3-203ENST00000562874 ATAD5Q96QE3 1844 aa19.58■□□□□ 0.73
SF3B3-203ENST00000562874 SRGAP3O43295 1099 aa19.58■□□□□ 0.72
SF3B3-203ENST00000562874 TBC1D8O95759 1140 aa19.58■□□□□ 0.72
SF3B3-203ENST00000562874 PHKA1P46020 1223 aa19.58■□□□□ 0.72
SF3B3-203ENST00000562874 MAP3K11Q16584 847 aa19.58■□□□□ 0.72
SF3B3-203ENST00000562874 SUPT20HL1Q3ZLR7 823 aa19.58■□□□□ 0.72
SF3B3-203ENST00000562874 SPRYD7Q5W111 196 aa19.58■□□□□ 0.72
SF3B3-203ENST00000562874 REM2Q8IYK8 340 aaPredicted RBP19.58■□□□□ 0.72
SF3B3-203ENST00000562874 WNK4Q96J92 1243 aa19.58■□□□□ 0.72
SF3B3-203ENST00000562874 TEPSINQ96N21 525 aa19.58■□□□□ 0.72
SF3B3-203ENST00000562874 MAST3O60307 1309 aa19.57■□□□□ 0.72
SF3B3-203ENST00000562874 USP2O75604 605 aaPredicted RBP19.57■□□□□ 0.72
SF3B3-203ENST00000562874 GNAI3P08754 354 aa19.57■□□□□ 0.72
SF3B3-203ENST00000562874 IL15P40933 162 aaPredicted RBP19.57■□□□□ 0.72
SF3B3-203ENST00000562874 COPRSQ9NQ92 184 aa19.57■□□□□ 0.72
SF3B3-203ENST00000562874 FBXO3Q9UK99 471 aa19.57■□□□□ 0.72
SF3B3-203ENST00000562874 PTPRFP10586 1907 aa19.57■□□□□ 0.72
SF3B3-203ENST00000562874 PRDX5P30044 214 aa19.56■□□□□ 0.72
SF3B3-203ENST00000562874 IREB2P48200 963 aaKnown RBP19.56■□□□□ 0.72
SF3B3-203ENST00000562874 SREBF2Q12772 1141 aa19.56■□□□□ 0.72
SF3B3-203ENST00000562874 TMEM57Q8N5G2 664 aa19.56■□□□□ 0.72
SF3B3-203ENST00000562874 SLC10A4Q96EP9 437 aa19.56■□□□□ 0.72
SF3B3-203ENST00000562874 HDAC5Q9UQL6 1122 aa19.56■□□□□ 0.72
SF3B3-203ENST00000562874 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.56■□□□□ 0.72
SF3B3-203ENST00000562874 DOCK1Q14185 1865 aa19.56■□□□□ 0.72
SF3B3-203ENST00000562874 IPO8O15397 1037 aaKnown RBP19.55■□□□□ 0.72
SF3B3-203ENST00000562874 GJA5P36382 358 aa19.55■□□□□ 0.72
SF3B3-203ENST00000562874 TM4SF4P48230 202 aa19.55■□□□□ 0.72
SF3B3-203ENST00000562874 TNNI2P48788 182 aa19.55■□□□□ 0.72
SF3B3-203ENST00000562874 HDLBPQ00341 1268 aaKnown RBP19.55■□□□□ 0.72
SF3B3-203ENST00000562874 DIXDC1Q155Q3 683 aa19.55■□□□□ 0.72
SF3B3-203ENST00000562874 ZDHHC15Q96MV8 337 aa19.55■□□□□ 0.72
SF3B3-203ENST00000562874 ELP3Q9H9T3 547 aa19.55■□□□□ 0.72
SF3B3-203ENST00000562874 FOCADQ5VW36 1801 aa19.55■□□□□ 0.72
SF3B3-203ENST00000562874 APOBEC3HQ6NTF7 200 aaKnown RBP19.54■□□□□ 0.72
SF3B3-203ENST00000562874 WDR66Q8TBY9 1149 aa19.54■□□□□ 0.72
SF3B3-203ENST00000562874 R3HDMLQ9H3Y0 253 aa19.54■□□□□ 0.72
SF3B3-203ENST00000562874 TMOD2Q9NZR1 351 aa19.54■□□□□ 0.72
SF3B3-203ENST00000562874 PNMA6EA0A0J9YXQ4 647 aa19.53■□□□□ 0.72
SF3B3-203ENST00000562874 TFCP2Q12800 502 aa19.53■□□□□ 0.72
SF3B3-203ENST00000562874 MTX1Q13505 466 aa19.53■□□□□ 0.72
SF3B3-203ENST00000562874 ZKSCAN2Q63HK3 967 aa19.53■□□□□ 0.72
SF3B3-203ENST00000562874 ANKRD13AQ8IZ07 590 aa19.53■□□□□ 0.72
SF3B3-203ENST00000562874 ZNF296Q8WUU4 475 aaPredicted RBP19.53■□□□□ 0.72
SF3B3-203ENST00000562874 CNKSR2Q8WXI2 1034 aa19.53■□□□□ 0.72
SF3B3-203ENST00000562874 SUGT1Q9Y2Z0 365 aa19.53■□□□□ 0.72
SF3B3-203ENST00000562874 DAGLAQ9Y4D2 1042 aa19.53■□□□□ 0.72
SF3B3-203ENST00000562874 PHIPQ8WWQ0 1821 aa19.53■□□□□ 0.72
SF3B3-203ENST00000562874 A0A1B0GUL7 405 aa19.52■□□□□ 0.72
SF3B3-203ENST00000562874 IGF2BP3O00425 579 aaKnown RBP eCLIP19.52■□□□□ 0.72
SF3B3-203ENST00000562874 GNAI2P04899 355 aa19.52■□□□□ 0.72
SF3B3-203ENST00000562874 ZBTB48P10074 688 aaPredicted RBP19.52■□□□□ 0.72
SF3B3-203ENST00000562874 TIMM10P62072 90 aa19.52■□□□□ 0.72
SF3B3-203ENST00000562874 CCDC102BQ68D86 513 aa19.52■□□□□ 0.72
SF3B3-203ENST00000562874 C1orf115Q9H7X2 142 aa19.52■□□□□ 0.72
SF3B3-203ENST00000562874 GNL3LQ9NVN8 582 aaKnown RBP19.52■□□□□ 0.72
SF3B3-203ENST00000562874 MANSC4A6NHS7 340 aaPredicted RBP19.51■□□□□ 0.71
SF3B3-203ENST00000562874 VGLL4Q14135 290 aa19.51■□□□□ 0.71
SF3B3-203ENST00000562874 HHIPL2Q6UWX4 724 aa19.51■□□□□ 0.71
SF3B3-203ENST00000562874 OPTNQ96CV9 577 aa19.51■□□□□ 0.71
SF3B3-203ENST00000562874 DENND2AQ9ULE3 1009 aa19.51■□□□□ 0.71
SF3B3-203ENST00000562874 RPAP1Q9BWH6 1393 aaPredicted RBP19.51■□□□□ 0.71
SF3B3-203ENST00000562874 ZBED9Q6R2W3 1325 aa19.51■□□□□ 0.71
SF3B3-203ENST00000562874 GPR25O00155 361 aa19.5■□□□□ 0.71
SF3B3-203ENST00000562874 LDHBP07195 334 aaKnown RBP19.5■□□□□ 0.71
SF3B3-203ENST00000562874 RASGRF1Q13972 1273 aa19.5■□□□□ 0.71
SF3B3-203ENST00000562874 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.5■□□□□ 0.71
SF3B3-203ENST00000562874 CTU1Q7Z7A3 348 aaKnown RBP19.5■□□□□ 0.71
SF3B3-203ENST00000562874 IFNL1Q8IU54 200 aa19.5■□□□□ 0.71
SF3B3-203ENST00000562874 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms