RNA–Protein interactions for RNA: ENST00000562785.1

CHD9-205, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 359 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-205ENST00000562785 DDX54Q8TDD1 881 aaKnown RBP8.85□□□□□ -0.99
CHD9-205ENST00000562785 SAMM50Q9Y512 469 aa8.85□□□□□ -0.99
CHD9-205ENST00000562785 F6X3S4 739 aa8.84□□□□□ -0.99
CHD9-205ENST00000562785 LINC01387J3KSC0 135 aa8.84□□□□□ -0.99
CHD9-205ENST00000562785 EIF4EBP3O60516 100 aaPredicted RBP8.84□□□□□ -0.99
CHD9-205ENST00000562785 FAM117BQ6P1L5 589 aa8.84□□□□□ -0.99
CHD9-205ENST00000562785 TXNDC11Q6PKC3 985 aa8.84□□□□□ -0.99
CHD9-205ENST00000562785 SULF2Q8IWU5 870 aa8.84□□□□□ -0.99
CHD9-205ENST00000562785 OSGEPQ9NPF4 335 aa8.84□□□□□ -0.99
CHD9-205ENST00000562785 KCNQ5Q9NR82 932 aa8.84□□□□□ -0.99
CHD9-205ENST00000562785 TLR6Q9Y2C9 796 aa8.84□□□□□ -0.99
CHD9-205ENST00000562785 FSCN2O14926 492 aa8.83□□□□□ -1
CHD9-205ENST00000562785 BMP6P22004 513 aa8.83□□□□□ -1
CHD9-205ENST00000562785 CDC25BP30305 580 aa8.83□□□□□ -1
CHD9-205ENST00000562785 C19orf57Q0VDD7 668 aa8.83□□□□□ -1
CHD9-205ENST00000562785 AP3B2Q13367 1082 aa8.83□□□□□ -1
CHD9-205ENST00000562785 HGSNATQ68CP4 663 aa8.83□□□□□ -1
CHD9-205ENST00000562785 SVOPQ8N4V2 548 aa8.83□□□□□ -1
CHD9-205ENST00000562785 ENAMQ9NRM1 1142 aa8.83□□□□□ -1
CHD9-205ENST00000562785 ADAMTS1Q9UHI8 967 aa8.83□□□□□ -1
CHD9-205ENST00000562785 TM4SF5O14894 197 aa8.82□□□□□ -1
CHD9-205ENST00000562785 TFE3P19532 575 aaPredicted RBP8.82□□□□□ -1
CHD9-205ENST00000562785 EIF4A3P38919 411 aaKnown RBP8.82□□□□□ -1
CHD9-205ENST00000562785 GJA8P48165 433 aa8.82□□□□□ -1
CHD9-205ENST00000562785 TNNI2P48788 182 aa8.82□□□□□ -1
CHD9-205ENST00000562785 ARL4DP49703 201 aa8.82□□□□□ -1
CHD9-205ENST00000562785 LMNB2Q03252 620 aa8.82□□□□□ -1
CHD9-205ENST00000562785 RASIP1Q5U651 963 aa8.82□□□□□ -1
CHD9-205ENST00000562785 MAP4K3Q8IVH8 894 aa8.82□□□□□ -1
CHD9-205ENST00000562785 SLC43A3Q8NBI5 491 aa8.82□□□□□ -1
CHD9-205ENST00000562785 STK35Q8TDR2 534 aa8.82□□□□□ -1
CHD9-205ENST00000562785 SLC7A3Q8WY07 619 aa8.82□□□□□ -1
CHD9-205ENST00000562785 CAPN10Q9HC96 672 aa8.82□□□□□ -1
CHD9-205ENST00000562785 CYP8B1Q9UNU6 501 aa8.82□□□□□ -1
CHD9-205ENST00000562785 BAZ1AQ9NRL2 1556 aaPredicted RBP8.82□□□□□ -1
CHD9-205ENST00000562785 MINDY4BA8MYZ0 360 aa8.81□□□□□ -1
CHD9-205ENST00000562785 WIPF1O43516 503 aa8.81□□□□□ -1
CHD9-205ENST00000562785 GARTP22102 1010 aa8.81□□□□□ -1
CHD9-205ENST00000562785 ARNTP27540 789 aa8.81□□□□□ -1
CHD9-205ENST00000562785 SETDB1Q15047 1291 aa8.81□□□□□ -1
CHD9-205ENST00000562785 PDZD3Q86UT5 571 aa8.81□□□□□ -1
CHD9-205ENST00000562785 KIAA0825Q8IV33 1275 aa8.81□□□□□ -1
CHD9-205ENST00000562785 NEDD1Q8NHV4 660 aa8.81□□□□□ -1
CHD9-205ENST00000562785 SPON2Q9BUD6 331 aa8.81□□□□□ -1
CHD9-205ENST00000562785 EMILIN2Q9BXX0 1053 aa8.81□□□□□ -1
CHD9-205ENST00000562785 NRSN2Q9GZP1 204 aa8.81□□□□□ -1
CHD9-205ENST00000562785 INPP5FQ9Y2H2 1132 aa8.81□□□□□ -1
CHD9-205ENST00000562785 ARHGEF15O94989 841 aa8.8□□□□□ -1
CHD9-205ENST00000562785 PF4P02776 101 aa8.8□□□□□ -1
CHD9-205ENST00000562785 GSTM4Q03013 218 aa8.8□□□□□ -1
CHD9-205ENST00000562785 ZNF252P-AS1Q0IIN9 211 aa8.8□□□□□ -1
CHD9-205ENST00000562785 PAK2Q13177 524 aa8.8□□□□□ -1
CHD9-205ENST00000562785 GNL2Q13823 731 aaKnown RBP8.8□□□□□ -1
CHD9-205ENST00000562785 LRRC14Q15048 493 aa8.8□□□□□ -1
CHD9-205ENST00000562785 SCARA3Q6AZY7 606 aa8.8□□□□□ -1
CHD9-205ENST00000562785 TRIM42Q8IWZ5 723 aa8.8□□□□□ -1
CHD9-205ENST00000562785 DMRTC2Q8IXT2 367 aaPredicted RBP8.8□□□□□ -1
CHD9-205ENST00000562785 DTWD1Q8N5C7 304 aa8.8□□□□□ -1
CHD9-205ENST00000562785 KLHL23Q8NBE8 558 aa8.8□□□□□ -1
CHD9-205ENST00000562785 SREK1Q8WXA9 508 aaKnown RBP8.8□□□□□ -1
CHD9-205ENST00000562785 CARD10Q9BWT7 1032 aa8.8□□□□□ -1
CHD9-205ENST00000562785 CAMK2GQ13555 558 aaPredicted RBP8.79□□□□□ -1
CHD9-205ENST00000562785 LLGL2Q6P1M3 1020 aa8.79□□□□□ -1
CHD9-205ENST00000562785 FBXL19Q6PCT2 694 aa8.79□□□□□ -1
CHD9-205ENST00000562785 CCDC84Q86UT8 332 aaPredicted RBP8.79□□□□□ -1
CHD9-205ENST00000562785 RRAGCQ9HB90 399 aa8.79□□□□□ -1
CHD9-205ENST00000562785 SUPT16HQ9Y5B9 1047 aaKnown RBP8.79□□□□□ -1
CHD9-205ENST00000562785 GREM1O60565 184 aa8.78□□□□□ -1
CHD9-205ENST00000562785 DEAF1O75398 565 aaPredicted RBP8.78□□□□□ -1
CHD9-205ENST00000562785 CYP11A1P05108 521 aa8.78□□□□□ -1
CHD9-205ENST00000562785 GSTP1P09211 210 aaKnown RBP8.78□□□□□ -1
CHD9-205ENST00000562785 FAM160A1Q05DH4 1040 aa8.78□□□□□ -1
CHD9-205ENST00000562785 GALNT11Q8NCW6 608 aa8.78□□□□□ -1
CHD9-205ENST00000562785 RASGRP4Q8TDF6 673 aa8.78□□□□□ -1
CHD9-205ENST00000562785 ZNF296Q8WUU4 475 aaPredicted RBP8.78□□□□□ -1
CHD9-205ENST00000562785 GAL3ST3Q96A11 431 aa8.78□□□□□ -1
CHD9-205ENST00000562785 GPRASP2Q96D09 838 aa8.78□□□□□ -1
CHD9-205ENST00000562785 TRIM11Q96F44 468 aa8.78□□□□□ -1
CHD9-205ENST00000562785 KLHDC7BQ96G42 594 aa8.78□□□□□ -1
CHD9-205ENST00000562785 LMNB1P20700 586 aa8.77□□□□□ -1.01
CHD9-205ENST00000562785 SUZ12Q15022 739 aaKnown RBP8.77□□□□□ -1.01
CHD9-205ENST00000562785 SF3A1Q15459 793 aaKnown RBP8.77□□□□□ -1.01
CHD9-205ENST00000562785 SNAP47Q5SQN1 464 aa8.77□□□□□ -1.01
CHD9-205ENST00000562785 LINC00114Q6XXX2 140 aa8.77□□□□□ -1.01
CHD9-205ENST00000562785 GRIN3AQ8TCU5 1115 aa8.77□□□□□ -1.01
CHD9-205ENST00000562785 DCAF11Q8TEB1 546 aa8.77□□□□□ -1.01
CHD9-205ENST00000562785 GMLQ99445 158 aa8.77□□□□□ -1.01
CHD9-205ENST00000562785 NT5C1AQ9BXI3 368 aa8.77□□□□□ -1.01
CHD9-205ENST00000562785 MIR1-1HGQ9H1L0 117 aa8.77□□□□□ -1.01
CHD9-205ENST00000562785 CBX8Q9HC52 389 aa8.77□□□□□ -1.01
CHD9-205ENST00000562785 CACNA2D2Q9NY47 1150 aa8.77□□□□□ -1.01
CHD9-205ENST00000562785 PCDHB5Q9Y5E4 795 aa8.77□□□□□ -1.01
CHD9-205ENST00000562785 TRIM37O94972 964 aa8.76□□□□□ -1.01
CHD9-205ENST00000562785 SNRPNP63162 240 aaKnown RBP8.76□□□□□ -1.01
CHD9-205ENST00000562785 POU4F3Q15319 338 aa8.76□□□□□ -1.01
CHD9-205ENST00000562785 TRAPPC3LQ5T215 181 aa8.76□□□□□ -1.01
CHD9-205ENST00000562785 GOLM1Q8NBJ4 401 aa8.76□□□□□ -1.01
CHD9-205ENST00000562785 EAF1Q96JC9 268 aaPredicted RBP8.76□□□□□ -1.01
CHD9-205ENST00000562785 KRT82Q9NSB4 513 aa8.76□□□□□ -1.01
CHD9-205ENST00000562785 SMARCA4P51532 1647 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms