RNA–Protein interactions for RNA: ENST00000562219.1

BBS4-205, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 1 (best)

Gene BBS4, Length 1,004 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-205ENST00000562219 PTPN18Q99952 460 aa12.98□□□□□ -0.33
BBS4-205ENST00000562219 TDRD3Q9H7E2 651 aaKnown RBP12.98□□□□□ -0.33
BBS4-205ENST00000562219 EFCC1Q9HA90 598 aa12.98□□□□□ -0.33
BBS4-205ENST00000562219 SALL2Q9Y467 1007 aaPredicted RBP12.98□□□□□ -0.33
BBS4-205ENST00000562219 CRKP46108 304 aa12.97□□□□□ -0.33
BBS4-205ENST00000562219 TNNI2P48788 182 aa12.97□□□□□ -0.33
BBS4-205ENST00000562219 SLC4A10Q6U841 1118 aa12.97□□□□□ -0.33
BBS4-205ENST00000562219 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.97□□□□□ -0.33
BBS4-205ENST00000562219 CDAN1Q8IWY9 1227 aa12.97□□□□□ -0.33
BBS4-205ENST00000562219 ARMC5Q96C12 935 aa12.97□□□□□ -0.33
BBS4-205ENST00000562219 MS4A4AQ96JQ5 239 aa12.97□□□□□ -0.33
BBS4-205ENST00000562219 SRCIN1Q9C0H9 1055 aa12.97□□□□□ -0.33
BBS4-205ENST00000562219 MROH5Q6ZUA9 1318 aa12.96□□□□□ -0.33
BBS4-205ENST00000562219 TCP10L2B9ZVM9 353 aa12.96□□□□□ -0.33
BBS4-205ENST00000562219 VGLL4Q14135 290 aa12.96□□□□□ -0.33
BBS4-205ENST00000562219 SUCLG2Q96I99 432 aa12.96□□□□□ -0.33
BBS4-205ENST00000562219 PUS3Q9BZE2 481 aaKnown RBP12.96□□□□□ -0.33
BBS4-205ENST00000562219 TMEM39BQ9GZU3 492 aa12.96□□□□□ -0.33
BBS4-205ENST00000562219 SPINK5Q9NQ38 1064 aaPredicted RBP12.96□□□□□ -0.33
BBS4-205ENST00000562219 UTYO14607 1347 aa12.95□□□□□ -0.34
BBS4-205ENST00000562219 NBPF7P0C2Y1 421 aaPredicted RBP12.95□□□□□ -0.34
BBS4-205ENST00000562219 GTF2A2P52657 109 aa12.95□□□□□ -0.34
BBS4-205ENST00000562219 VPS37DQ86XT2 251 aa12.95□□□□□ -0.34
BBS4-205ENST00000562219 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.95□□□□□ -0.34
BBS4-205ENST00000562219 CNKSR2Q8WXI2 1034 aa12.95□□□□□ -0.34
BBS4-205ENST00000562219 BRI3BPQ8WY22 251 aa12.95□□□□□ -0.34
BBS4-205ENST00000562219 KAZALD1Q96I82 304 aa12.95□□□□□ -0.34
BBS4-205ENST00000562219 RIPOR2Q9Y4F9 1068 aa12.95□□□□□ -0.34
BBS4-205ENST00000562219 CSADQ9Y600 493 aa12.95□□□□□ -0.34
BBS4-205ENST00000562219 MGAMO43451 1857 aa12.95□□□□□ -0.34
BBS4-205ENST00000562219 DOCK2Q92608 1830 aa12.95□□□□□ -0.34
BBS4-205ENST00000562219 CCL15-CCL14A0A0B4J2E2 113 aa12.94□□□□□ -0.34
BBS4-205ENST00000562219 MAP3K9P80192 1104 aa12.94□□□□□ -0.34
BBS4-205ENST00000562219 HDLBPQ00341 1268 aaKnown RBP12.94□□□□□ -0.34
BBS4-205ENST00000562219 CAP1Q01518 475 aa12.94□□□□□ -0.34
BBS4-205ENST00000562219 ARHGEF6Q15052 776 aa12.94□□□□□ -0.34
BBS4-205ENST00000562219 TAF1CQ15572 869 aaPredicted RBP12.94□□□□□ -0.34
BBS4-205ENST00000562219 CCL15Q16663 113 aa12.94□□□□□ -0.34
BBS4-205ENST00000562219 RABL6Q3YEC7 729 aaPredicted RBP12.94□□□□□ -0.34
BBS4-205ENST00000562219 FBXO33Q7Z6M2 555 aa12.94□□□□□ -0.34
BBS4-205ENST00000562219 TBC1D22AQ8WUA7 517 aa12.94□□□□□ -0.34
BBS4-205ENST00000562219 TEKT1Q969V4 418 aa12.94□□□□□ -0.34
BBS4-205ENST00000562219 OTUD5Q96G74 571 aa12.94□□□□□ -0.34
BBS4-205ENST00000562219 BICC1Q9H694 974 aaKnown RBP12.94□□□□□ -0.34
BBS4-205ENST00000562219 ZFYVE28Q9HCC9 887 aa12.94□□□□□ -0.34
BBS4-205ENST00000562219 FRAT2O75474 233 aaPredicted RBP12.93□□□□□ -0.34
BBS4-205ENST00000562219 CHAF1AQ13111 956 aaPredicted RBP12.93□□□□□ -0.34
BBS4-205ENST00000562219 GRIK5Q16478 980 aa12.93□□□□□ -0.34
BBS4-205ENST00000562219 SLC9C1Q4G0N8 1177 aa12.93□□□□□ -0.34
BBS4-205ENST00000562219 CAVIN4Q5BKX8 364 aa12.93□□□□□ -0.34
BBS4-205ENST00000562219 METTL24Q5JXM2 366 aa12.93□□□□□ -0.34
BBS4-205ENST00000562219 ZNF333Q96JL9 665 aa12.93□□□□□ -0.34
BBS4-205ENST00000562219 TMOD2Q9NZR1 351 aa12.93□□□□□ -0.34
BBS4-205ENST00000562219 IQSEC3Q9UPP2 1182 aaPredicted RBP12.93□□□□□ -0.34
BBS4-205ENST00000562219 RPAP1Q9BWH6 1393 aaPredicted RBP12.93□□□□□ -0.34
BBS4-205ENST00000562219 MAST3O60307 1309 aa12.92□□□□□ -0.34
BBS4-205ENST00000562219 MYH2Q9UKX2 1941 aa12.92□□□□□ -0.34
BBS4-205ENST00000562219 SPDYE5A6NIY4 337 aa12.92□□□□□ -0.34
BBS4-205ENST00000562219 ANP32CO43423 234 aa12.92□□□□□ -0.34
BBS4-205ENST00000562219 WDHD1O75717 1129 aaPredicted RBP12.92□□□□□ -0.34
BBS4-205ENST00000562219 EN2P19622 333 aaPredicted RBP12.92□□□□□ -0.34
BBS4-205ENST00000562219 FAM43AQ8N2R8 423 aa12.92□□□□□ -0.34
BBS4-205ENST00000562219 VGLL2Q8N8G2 317 aa12.92□□□□□ -0.34
BBS4-205ENST00000562219 HOOK2Q96ED9 719 aa12.92□□□□□ -0.34
BBS4-205ENST00000562219 ZDHHC15Q96MV8 337 aa12.92□□□□□ -0.34
BBS4-205ENST00000562219 TMEM106CQ9BVX2 250 aa12.92□□□□□ -0.34
BBS4-205ENST00000562219 ZCCHC17Q9NP64 241 aaKnown RBP12.92□□□□□ -0.34
BBS4-205ENST00000562219 SNCAIPQ9Y6H5 919 aa12.92□□□□□ -0.34
BBS4-205ENST00000562219 PTPRFP10586 1907 aa12.92□□□□□ -0.34
BBS4-205ENST00000562219 KIF16BQ96L93 1317 aa12.91□□□□□ -0.34
BBS4-205ENST00000562219 PDE8BO95263 885 aa12.91□□□□□ -0.34
BBS4-205ENST00000562219 CETPP11597 493 aa12.91□□□□□ -0.34
BBS4-205ENST00000562219 CACNB3P54284 484 aa12.91□□□□□ -0.34
BBS4-205ENST00000562219 LRRC24Q50LG9 513 aa12.91□□□□□ -0.34
BBS4-205ENST00000562219 HABP4Q5JVS0 413 aaKnown RBP12.91□□□□□ -0.34
BBS4-205ENST00000562219 FKBP1CQ5VVH2 108 aa12.91□□□□□ -0.34
BBS4-205ENST00000562219 NBPF11Q86T75 865 aa12.91□□□□□ -0.34
BBS4-205ENST00000562219 FAM83AQ86UY5 434 aa12.91□□□□□ -0.34
BBS4-205ENST00000562219 ANKRD44Q8N8A2 993 aa12.91□□□□□ -0.34
BBS4-205ENST00000562219 WRNIP1Q96S55 665 aa12.91□□□□□ -0.34
BBS4-205ENST00000562219 PTCH2Q9Y6C5 1203 aa12.91□□□□□ -0.34
BBS4-205ENST00000562219 TLR2O60603 784 aa12.9□□□□□ -0.34
BBS4-205ENST00000562219 SNAPC2Q13487 334 aa12.9□□□□□ -0.34
BBS4-205ENST00000562219 PUM3Q15397 648 aaKnown RBP12.9□□□□□ -0.34
BBS4-205ENST00000562219 ERO1BQ86YB8 467 aa12.9□□□□□ -0.34
BBS4-205ENST00000562219 MRIQ9BWK5 157 aa12.9□□□□□ -0.34
BBS4-205ENST00000562219 SUGT1Q9Y2Z0 365 aa12.9□□□□□ -0.34
BBS4-205ENST00000562219 CEP290O15078 2479 aa12.9□□□□□ -0.34
BBS4-205ENST00000562219 IRF6O14896 467 aa12.89□□□□□ -0.35
BBS4-205ENST00000562219 BCAMP50895 628 aa12.89□□□□□ -0.35
BBS4-205ENST00000562219 PPIL2Q13356 520 aa12.89□□□□□ -0.35
BBS4-205ENST00000562219 KIF22Q14807 665 aa12.89□□□□□ -0.35
BBS4-205ENST00000562219 DCAF15Q66K64 600 aa12.89□□□□□ -0.35
BBS4-205ENST00000562219 APOBEC3HQ6NTF7 200 aaKnown RBP12.89□□□□□ -0.35
BBS4-205ENST00000562219 HHIPL2Q6UWX4 724 aa12.89□□□□□ -0.35
BBS4-205ENST00000562219 ZKSCAN4Q969J2 545 aaPredicted RBP12.89□□□□□ -0.35
BBS4-205ENST00000562219 PTPRCP08575 1304 aa12.88□□□□□ -0.35
BBS4-205ENST00000562219 BTBD19C9JJ37 291 aa12.88□□□□□ -0.35
BBS4-205ENST00000562219 GNRH1P01148 92 aa12.88□□□□□ -0.35
BBS4-205ENST00000562219 IFIT1P09914 478 aaKnown RBP12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms