RNA–Protein interactions for RNA: ENST00000562045.1

SYNGR3-202, Transcript of synaptogyrin 3, humanhuman

TSL 2 BASIC

Gene SYNGR3, Length 1,743 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-202ENST00000562045 UQCRFS1P1P0C7P4 283 aa27.27■■□□□ 1.96
SYNGR3-202ENST00000562045 TBC1D9Q6ZT07 1266 aa27.27■■□□□ 1.96
SYNGR3-202ENST00000562045 WDR66Q8TBY9 1149 aa27.27■■□□□ 1.96
SYNGR3-202ENST00000562045 MYOZ2Q9NPC6 264 aa27.27■■□□□ 1.96
SYNGR3-202ENST00000562045 ASTN2O75129 1339 aaPredicted RBP27.27■■□□□ 1.96
SYNGR3-202ENST00000562045 PRDX5P30044 214 aa27.27■■□□□ 1.96
SYNGR3-202ENST00000562045 TBC1D22AQ8WUA7 517 aa27.27■■□□□ 1.96
SYNGR3-202ENST00000562045 ZNF512BQ96KM6 892 aaPredicted RBP27.27■■□□□ 1.96
SYNGR3-202ENST00000562045 TTF2Q9UNY4 1162 aaKnown RBP27.27■■□□□ 1.96
SYNGR3-202ENST00000562045 SDSP20132 328 aa27.26■■□□□ 1.95
SYNGR3-202ENST00000562045 PDS5AQ29RF7 1337 aaKnown RBP27.25■■□□□ 1.95
SYNGR3-202ENST00000562045 ZAP70P43403 619 aa27.25■■□□□ 1.95
SYNGR3-202ENST00000562045 KIF4BQ2VIQ3 1234 aa27.25■■□□□ 1.95
SYNGR3-202ENST00000562045 USP50Q70EL3 339 aaPredicted RBP27.25■■□□□ 1.95
SYNGR3-202ENST00000562045 SALL1Q9NSC2 1324 aa27.25■■□□□ 1.95
SYNGR3-202ENST00000562045 POLR2AP24928 1970 aaKnown RBP27.25■■□□□ 1.95
SYNGR3-202ENST00000562045 PNMA8AQ86V59 439 aaPredicted RBP27.24■■□□□ 1.95
SYNGR3-202ENST00000562045 OGFOD1Q8N543 542 aa27.24■■□□□ 1.95
SYNGR3-202ENST00000562045 TOMM70O94826 608 aa27.23■■□□□ 1.95
SYNGR3-202ENST00000562045 CYP2E1P05181 493 aaPredicted RBP27.23■■□□□ 1.95
SYNGR3-202ENST00000562045 NBPF9Q3BBW0 867 aa27.23■■□□□ 1.95
SYNGR3-202ENST00000562045 ABCF2Q9UG63 623 aa27.23■■□□□ 1.95
SYNGR3-202ENST00000562045 TRIM6-TRIM34B2RNG4 842 aa27.22■■□□□ 1.95
SYNGR3-202ENST00000562045 ATP5JP18859 108 aa27.22■■□□□ 1.95
SYNGR3-202ENST00000562045 CDC45O75419 566 aa27.21■■□□□ 1.95
SYNGR3-202ENST00000562045 ANTXR1Q9H6X2 564 aa27.21■■□□□ 1.95
SYNGR3-202ENST00000562045 CLEC11AQ9Y240 323 aa27.21■■□□□ 1.95
SYNGR3-202ENST00000562045 CFAP100Q494V2 611 aa27.21■■□□□ 1.95
SYNGR3-202ENST00000562045 MAP1SQ66K74 1059 aaPredicted RBP27.21■■□□□ 1.95
SYNGR3-202ENST00000562045 LDHDQ86WU2 507 aa27.21■■□□□ 1.95
SYNGR3-202ENST00000562045 ZNF384Q8TF68 577 aa27.21■■□□□ 1.95
SYNGR3-202ENST00000562045 ZBED3Q96IU2 234 aaPredicted RBP27.21■■□□□ 1.95
SYNGR3-202ENST00000562045 TSHZ2Q9NRE2 1034 aa27.21■■□□□ 1.95
SYNGR3-202ENST00000562045 HDAC9Q9UKV0 1011 aa27.21■■□□□ 1.95
SYNGR3-202ENST00000562045 WNT10BO00744 389 aa27.2■■□□□ 1.94
SYNGR3-202ENST00000562045 DIXDC1Q155Q3 683 aa27.2■■□□□ 1.94
SYNGR3-202ENST00000562045 CNTROBQ8N137 903 aa27.2■■□□□ 1.94
SYNGR3-202ENST00000562045 EDC3Q96F86 508 aaKnown RBP27.2■■□□□ 1.94
SYNGR3-202ENST00000562045 PIH1D3Q9NQM4 214 aaKnown RBP27.2■■□□□ 1.94
SYNGR3-202ENST00000562045 SCAF8Q9UPN6 1271 aaKnown RBP27.2■■□□□ 1.94
SYNGR3-202ENST00000562045 MYH2Q9UKX2 1941 aa27.2■■□□□ 1.94
SYNGR3-202ENST00000562045 LDHBP07195 334 aaKnown RBP27.19■■□□□ 1.94
SYNGR3-202ENST00000562045 RILPL2Q969X0 211 aa27.19■■□□□ 1.94
SYNGR3-202ENST00000562045 PRMT6Q96LA8 375 aaPredicted RBP27.19■■□□□ 1.94
SYNGR3-202ENST00000562045 BOLA2Q9H3K6 86 aa27.19■■□□□ 1.94
SYNGR3-202ENST00000562045 ECM29Q5VYK3 1845 aa27.19■■□□□ 1.94
SYNGR3-202ENST00000562045 DOCK2Q92608 1830 aa27.19■■□□□ 1.94
SYNGR3-202ENST00000562045 CRKP46108 304 aa27.19■■□□□ 1.94
SYNGR3-202ENST00000562045 RBM46Q8TBY0 533 aaKnown RBP27.19■■□□□ 1.94
SYNGR3-202ENST00000562045 SUGT1Q9Y2Z0 365 aa27.19■■□□□ 1.94
SYNGR3-202ENST00000562045 CHADLQ6NUI6 762 aa27.18■■□□□ 1.94
SYNGR3-202ENST00000562045 PGAP2Q9UHJ9 254 aa27.18■■□□□ 1.94
SYNGR3-202ENST00000562045 SERPINA10Q9UK55 444 aa27.18■■□□□ 1.94
SYNGR3-202ENST00000562045 RBM5P52756 815 aaKnown RBP eCLIP27.17■■□□□ 1.94
SYNGR3-202ENST00000562045 CASC1Q6TDU7 716 aa27.17■■□□□ 1.94
SYNGR3-202ENST00000562045 DLK2Q6UY11 383 aa27.17■■□□□ 1.94
SYNGR3-202ENST00000562045 PPIL4Q8WUA2 492 aaKnown RBP eCLIP27.17■■□□□ 1.94
SYNGR3-202ENST00000562045 DLGAP5Q15398 846 aa27.16■■□□□ 1.94
SYNGR3-202ENST00000562045 MTMR14Q8NCE2 650 aa27.16■■□□□ 1.94
SYNGR3-202ENST00000562045 DNAJC2Q99543 621 aaKnown RBP27.16■■□□□ 1.94
SYNGR3-202ENST00000562045 SPDYE2BA6NHP3 402 aa27.16■■□□□ 1.94
SYNGR3-202ENST00000562045 MAP4K4O95819 1239 aaPredicted RBP27.16■■□□□ 1.94
SYNGR3-202ENST00000562045 SPDYE6P0CI01 402 aa27.16■■□□□ 1.94
SYNGR3-202ENST00000562045 MECOMQ03112 1051 aa27.16■■□□□ 1.94
SYNGR3-202ENST00000562045 ZGPATQ8N5A5 531 aaKnown RBP27.16■■□□□ 1.94
SYNGR3-202ENST00000562045 EVI5LQ96CN4 794 aa27.16■■□□□ 1.94
SYNGR3-202ENST00000562045 GGA3Q9NZ52 723 aa27.16■■□□□ 1.94
SYNGR3-202ENST00000562045 FMR1Q06787 632 aaKnown RBP eCLIP27.15■■□□□ 1.94
SYNGR3-202ENST00000562045 ANGEL2Q5VTE6 544 aaKnown RBP27.15■■□□□ 1.94
SYNGR3-202ENST00000562045 ERICH6Q7L0X2 663 aa27.15■■□□□ 1.94
SYNGR3-202ENST00000562045 MAST2Q6P0Q8 1798 aa27.15■■□□□ 1.94
SYNGR3-202ENST00000562045 MMP14P50281 582 aa27.14■■□□□ 1.94
SYNGR3-202ENST00000562045 SMC1BQ8NDV3 1235 aa27.14■■□□□ 1.94
SYNGR3-202ENST00000562045 TEKT1Q969V4 418 aa27.14■■□□□ 1.94
SYNGR3-202ENST00000562045 NSUN4Q96CB9 384 aaKnown RBP27.14■■□□□ 1.94
SYNGR3-202ENST00000562045 HAUS7Q99871 368 aa27.14■■□□□ 1.94
SYNGR3-202ENST00000562045 RAI14Q9P0K7 980 aa27.14■■□□□ 1.94
SYNGR3-202ENST00000562045 LRP2BPQ9P2M1 347 aa27.14■■□□□ 1.94
SYNGR3-202ENST00000562045 GOLIM4O00461 696 aa27.13■■□□□ 1.93
SYNGR3-202ENST00000562045 HDLBPQ00341 1268 aaKnown RBP27.13■■□□□ 1.93
SYNGR3-202ENST00000562045 ZC3H15Q8WU90 426 aaKnown RBP27.13■■□□□ 1.93
SYNGR3-202ENST00000562045 DAGLAQ9Y4D2 1042 aa27.13■■□□□ 1.93
SYNGR3-202ENST00000562045 MAST3O60307 1309 aa27.13■■□□□ 1.93
SYNGR3-202ENST00000562045 EIF5BO60841 1220 aaKnown RBP27.13■■□□□ 1.93
SYNGR3-202ENST00000562045 SPTY2D1Q68D10 685 aaPredicted RBP27.13■■□□□ 1.93
SYNGR3-202ENST00000562045 APOBEC3HQ6NTF7 200 aaKnown RBP27.13■■□□□ 1.93
SYNGR3-202ENST00000562045 DZIP1Q86YF9 867 aaKnown RBP27.13■■□□□ 1.93
SYNGR3-202ENST00000562045 GLIS2Q9BZE0 524 aaPredicted RBP27.13■■□□□ 1.93
SYNGR3-202ENST00000562045 CLRN2A0PK11 232 aa27.12■■□□□ 1.93
SYNGR3-202ENST00000562045 ITGBL1O95965 494 aaPredicted RBP27.12■■□□□ 1.93
SYNGR3-202ENST00000562045 HHIPL2Q6UWX4 724 aa27.12■■□□□ 1.93
SYNGR3-202ENST00000562045 ZDHHC15Q96MV8 337 aa27.12■■□□□ 1.93
SYNGR3-202ENST00000562045 MRIQ9BWK5 157 aa27.12■■□□□ 1.93
SYNGR3-202ENST00000562045 TDRD3Q9H7E2 651 aaKnown RBP27.12■■□□□ 1.93
SYNGR3-202ENST00000562045 TRAF5O00463 557 aa27.11■■□□□ 1.93
SYNGR3-202ENST00000562045 ADM5C9JUS6 153 aa27.1■■□□□ 1.93
SYNGR3-202ENST00000562045 PAG1Q9NWQ8 432 aa27.1■■□□□ 1.93
SYNGR3-202ENST00000562045 IDH1O75874 414 aaKnown RBP27.1■■□□□ 1.93
SYNGR3-202ENST00000562045 ADGRA1Q86SQ6 560 aa27.1■■□□□ 1.93
SYNGR3-202ENST00000562045 USP48Q86UV5 1035 aa27.09■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms