RNA–Protein interactions for RNA: ENST00000562039.1

NSMCE1-203, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 260 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-203ENST00000562039 COL1A1P02452 1464 aaPredicted RBP11.76□□□□□ -0.53
NSMCE1-203ENST00000562039 MYO1BO43795 1136 aa11.76□□□□□ -0.53
NSMCE1-203ENST00000562039 SLC10A3P09131 477 aa11.76□□□□□ -0.53
NSMCE1-203ENST00000562039 NF2P35240 595 aa11.76□□□□□ -0.53
NSMCE1-203ENST00000562039 MAP2K2P36507 400 aa11.76□□□□□ -0.53
NSMCE1-203ENST00000562039 NOGQ13253 232 aa11.76□□□□□ -0.53
NSMCE1-203ENST00000562039 RASA3Q14644 834 aa11.76□□□□□ -0.53
NSMCE1-203ENST00000562039 HHIPL1Q96JK4 782 aa11.76□□□□□ -0.53
NSMCE1-203ENST00000562039 BCL11AQ9H165 835 aa11.76□□□□□ -0.53
NSMCE1-203ENST00000562039 HDAC5Q9UQL6 1122 aa11.76□□□□□ -0.53
NSMCE1-203ENST00000562039 A0A1B0GUL7 405 aa11.75□□□□□ -0.53
NSMCE1-203ENST00000562039 DIXDC1Q155Q3 683 aa11.75□□□□□ -0.53
NSMCE1-203ENST00000562039 MTMR14Q8NCE2 650 aa11.75□□□□□ -0.53
NSMCE1-203ENST00000562039 THSD7BQ9C0I4 1608 aa11.75□□□□□ -0.53
NSMCE1-203ENST00000562039 PAPPA2Q9BXP8 1791 aa11.74□□□□□ -0.53
NSMCE1-203ENST00000562039 PRDX5P30044 214 aa11.74□□□□□ -0.53
NSMCE1-203ENST00000562039 G3BP1Q13283 466 aaKnown RBP eCLIP11.74□□□□□ -0.53
NSMCE1-203ENST00000562039 OS9Q13438 667 aaPredicted RBP11.74□□□□□ -0.53
NSMCE1-203ENST00000562039 SPDYE2Q495Y8 402 aa11.74□□□□□ -0.53
NSMCE1-203ENST00000562039 CCDC102BQ68D86 513 aa11.74□□□□□ -0.53
NSMCE1-203ENST00000562039 ARMC9Q7Z3E5 817 aa11.74□□□□□ -0.53
NSMCE1-203ENST00000562039 TBC1D22AQ8WUA7 517 aa11.74□□□□□ -0.53
NSMCE1-203ENST00000562039 CCDC102AQ96A19 550 aa11.74□□□□□ -0.53
NSMCE1-203ENST00000562039 XAGE2Q96GT9 111 aa11.74□□□□□ -0.53
NSMCE1-203ENST00000562039 CLMNQ96JQ2 1002 aa11.74□□□□□ -0.53
NSMCE1-203ENST00000562039 TMEM39BQ9GZU3 492 aa11.74□□□□□ -0.53
NSMCE1-203ENST00000562039 SERPINA10Q9UK55 444 aa11.74□□□□□ -0.53
NSMCE1-203ENST00000562039 SSC5DA1L4H1 1573 aa11.74□□□□□ -0.53
NSMCE1-203ENST00000562039 MYH13Q9UKX3 1938 aa11.74□□□□□ -0.53
NSMCE1-203ENST00000562039 TRPA1O75762 1119 aa11.73□□□□□ -0.53
NSMCE1-203ENST00000562039 MMP14P50281 582 aa11.73□□□□□ -0.53
NSMCE1-203ENST00000562039 MTX1Q13505 466 aa11.73□□□□□ -0.53
NSMCE1-203ENST00000562039 PI16Q6UXB8 463 aa11.73□□□□□ -0.53
NSMCE1-203ENST00000562039 ARAP2Q8WZ64 1704 aa11.73□□□□□ -0.53
NSMCE1-203ENST00000562039 TEKT1Q969V4 418 aa11.73□□□□□ -0.53
NSMCE1-203ENST00000562039 CSRNP1Q96S65 589 aa11.73□□□□□ -0.53
NSMCE1-203ENST00000562039 PRDM10Q9NQV6 1147 aa11.73□□□□□ -0.53
NSMCE1-203ENST00000562039 GNL3LQ9NVN8 582 aaKnown RBP11.73□□□□□ -0.53
NSMCE1-203ENST00000562039 FBXO3Q9UK99 471 aa11.73□□□□□ -0.53
NSMCE1-203ENST00000562039 CASP8AP2Q9UKL3 1982 aa11.73□□□□□ -0.53
NSMCE1-203ENST00000562039 ECM29Q5VYK3 1845 aa11.72□□□□□ -0.53
NSMCE1-203ENST00000562039 ZBTB7BO15156 539 aaPredicted RBP11.72□□□□□ -0.53
NSMCE1-203ENST00000562039 SURF6O75683 361 aaKnown RBP11.72□□□□□ -0.53
NSMCE1-203ENST00000562039 FKBP1BP68106 108 aa11.72□□□□□ -0.53
NSMCE1-203ENST00000562039 ATP8B2P98198 1209 aa11.72□□□□□ -0.53
NSMCE1-203ENST00000562039 RASGRF1Q13972 1273 aa11.72□□□□□ -0.53
NSMCE1-203ENST00000562039 GORABQ5T7V8 394 aa11.72□□□□□ -0.53
NSMCE1-203ENST00000562039 WDR66Q8TBY9 1149 aa11.72□□□□□ -0.53
NSMCE1-203ENST00000562039 YTHDC1Q96MU7 727 aaKnown RBP11.72□□□□□ -0.53
NSMCE1-203ENST00000562039 RNF186Q9NXI6 227 aa11.72□□□□□ -0.53
NSMCE1-203ENST00000562039 ABCF2Q9UG63 623 aa11.72□□□□□ -0.53
NSMCE1-203ENST00000562039 COG6Q9Y2V7 657 aa11.72□□□□□ -0.53
NSMCE1-203ENST00000562039 USP2O75604 605 aaPredicted RBP11.71□□□□□ -0.53
NSMCE1-203ENST00000562039 LDHBP07195 334 aaKnown RBP11.71□□□□□ -0.53
NSMCE1-203ENST00000562039 TCP10Q12799 353 aa11.71□□□□□ -0.53
NSMCE1-203ENST00000562039 APOBEC3HQ6NTF7 200 aaKnown RBP11.71□□□□□ -0.53
NSMCE1-203ENST00000562039 TBC1D9Q6ZT07 1266 aa11.71□□□□□ -0.53
NSMCE1-203ENST00000562039 SNRKQ9NRH2 765 aa11.71□□□□□ -0.53
NSMCE1-203ENST00000562039 RCAN3Q9UKA8 241 aa11.71□□□□□ -0.53
NSMCE1-203ENST00000562039 DENND2AQ9ULE3 1009 aa11.71□□□□□ -0.53
NSMCE1-203ENST00000562039 DAGLAQ9Y4D2 1042 aa11.71□□□□□ -0.53
NSMCE1-203ENST00000562039 APBB1O00213 710 aa11.7□□□□□ -0.54
NSMCE1-203ENST00000562039 PPP1R12BO60237 982 aaPredicted RBP11.7□□□□□ -0.54
NSMCE1-203ENST00000562039 POLA2Q14181 598 aa11.7□□□□□ -0.54
NSMCE1-203ENST00000562039 SUPT20HL1Q3ZLR7 823 aa11.7□□□□□ -0.54
NSMCE1-203ENST00000562039 CNKSR2Q8WXI2 1034 aa11.7□□□□□ -0.54
NSMCE1-203ENST00000562039 SLC10A4Q96EP9 437 aa11.7□□□□□ -0.54
NSMCE1-203ENST00000562039 ZDHHC15Q96MV8 337 aa11.7□□□□□ -0.54
NSMCE1-203ENST00000562039 DBNDD2Q9BQY9 259 aa11.7□□□□□ -0.54
NSMCE1-203ENST00000562039 ELP3Q9H9T3 547 aa11.7□□□□□ -0.54
NSMCE1-203ENST00000562039 TMOD2Q9NZR1 351 aa11.7□□□□□ -0.54
NSMCE1-203ENST00000562039 AKAP2Q9Y2D5 859 aa11.7□□□□□ -0.54
NSMCE1-203ENST00000562039 MAST3O60307 1309 aa11.69□□□□□ -0.54
NSMCE1-203ENST00000562039 TBC1D8O95759 1140 aa11.69□□□□□ -0.54
NSMCE1-203ENST00000562039 TNNI2P48788 182 aa11.69□□□□□ -0.54
NSMCE1-203ENST00000562039 NFIAQ12857 509 aa11.69□□□□□ -0.54
NSMCE1-203ENST00000562039 TNFAIP1Q13829 316 aa11.69□□□□□ -0.54
NSMCE1-203ENST00000562039 MVPQ14764 893 aaKnown RBP11.69□□□□□ -0.54
NSMCE1-203ENST00000562039 LDLRAD1Q5T700 205 aa11.69□□□□□ -0.54
NSMCE1-203ENST00000562039 C20orf194Q5TEA3 1177 aa11.69□□□□□ -0.54
NSMCE1-203ENST00000562039 CDC42EP5Q6NZY7 148 aa11.69□□□□□ -0.54
NSMCE1-203ENST00000562039 CEP85Q6P2H3 762 aa11.69□□□□□ -0.54
NSMCE1-203ENST00000562039 MIGA2Q7L4E1 593 aa11.69□□□□□ -0.54
NSMCE1-203ENST00000562039 SSH3Q8TE77 659 aa11.69□□□□□ -0.54
NSMCE1-203ENST00000562039 TEPSINQ96N21 525 aa11.69□□□□□ -0.54
NSMCE1-203ENST00000562039 CCDC8Q9H0W5 538 aaPredicted RBP11.69□□□□□ -0.54
NSMCE1-203ENST00000562039 USP40Q9NVE5 1235 aa11.69□□□□□ -0.54
NSMCE1-203ENST00000562039 TLR7Q9NYK1 1049 aaKnown RBP11.69□□□□□ -0.54
NSMCE1-203ENST00000562039 HMG20BQ9P0W2 317 aa11.69□□□□□ -0.54
NSMCE1-203ENST00000562039 EXOC6BQ9Y2D4 811 aa11.69□□□□□ -0.54
NSMCE1-203ENST00000562039 PPP2R3BQ9Y5P8 575 aa11.69□□□□□ -0.54
NSMCE1-203ENST00000562039 SLURP2P0DP57 97 aa11.68□□□□□ -0.54
NSMCE1-203ENST00000562039 GJA5P36382 358 aa11.68□□□□□ -0.54
NSMCE1-203ENST00000562039 IREB2P48200 963 aaKnown RBP11.68□□□□□ -0.54
NSMCE1-203ENST00000562039 HDLBPQ00341 1268 aaKnown RBP11.68□□□□□ -0.54
NSMCE1-203ENST00000562039 TNNI3KQ59H18 835 aa11.68□□□□□ -0.54
NSMCE1-203ENST00000562039 SPRYD7Q5W111 196 aa11.68□□□□□ -0.54
NSMCE1-203ENST00000562039 HHIPL2Q6UWX4 724 aa11.68□□□□□ -0.54
NSMCE1-203ENST00000562039 DZIP1Q86YF9 867 aaKnown RBP11.68□□□□□ -0.54
NSMCE1-203ENST00000562039 ZFPM1Q8IX07 1006 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms