RNA–Protein interactions for RNA: ENST00000561743.5

USB1-205, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 3 BASIC

Gene USB1, Length 1,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-205ENST00000561743 TNNQ9UQP3 1299 aa16.85■□□□□ 0.29
USB1-205ENST00000561743 ATF7IPQ6VMQ6 1270 aa16.84■□□□□ 0.29
USB1-205ENST00000561743 TDRD3Q9H7E2 651 aaKnown RBP16.84■□□□□ 0.29
USB1-205ENST00000561743 ZNF70Q9UC06 446 aaPredicted RBP16.84■□□□□ 0.29
USB1-205ENST00000561743 PA2G4Q9UQ80 394 aaKnown RBP16.84■□□□□ 0.29
USB1-205ENST00000561743 IPO8O15397 1037 aaKnown RBP16.83■□□□□ 0.28
USB1-205ENST00000561743 GNAI3P08754 354 aa16.83■□□□□ 0.28
USB1-205ENST00000561743 RASA3Q14644 834 aa16.83■□□□□ 0.28
USB1-205ENST00000561743 MAP3K11Q16584 847 aa16.83■□□□□ 0.28
USB1-205ENST00000561743 NBPF12Q5TAG4 269 aaPredicted RBP16.83■□□□□ 0.28
USB1-205ENST00000561743 FRAT1Q92837 279 aaPredicted RBP16.83■□□□□ 0.28
USB1-205ENST00000561743 ABHD8Q96I13 439 aa16.83■□□□□ 0.28
USB1-205ENST00000561743 COPRSQ9NQ92 184 aa16.83■□□□□ 0.28
USB1-205ENST00000561743 IL15P40933 162 aaPredicted RBP16.82■□□□□ 0.28
USB1-205ENST00000561743 HDLBPQ00341 1268 aaKnown RBP16.82■□□□□ 0.28
USB1-205ENST00000561743 MKRN3Q13064 507 aaKnown RBP16.82■□□□□ 0.28
USB1-205ENST00000561743 TNFAIP1Q13829 316 aa16.82■□□□□ 0.28
USB1-205ENST00000561743 ATP2B3Q16720 1220 aa16.82■□□□□ 0.28
USB1-205ENST00000561743 SUPT20HL1Q3ZLR7 823 aa16.82■□□□□ 0.28
USB1-205ENST00000561743 CEP126Q9P2H0 1117 aa16.82■□□□□ 0.28
USB1-205ENST00000561743 PPP1R12BO60237 982 aaPredicted RBP16.81■□□□□ 0.28
USB1-205ENST00000561743 MTX1Q13505 466 aa16.81■□□□□ 0.28
USB1-205ENST00000561743 CDAN1Q8IWY9 1227 aa16.81■□□□□ 0.28
USB1-205ENST00000561743 TEKT1Q969V4 418 aa16.81■□□□□ 0.28
USB1-205ENST00000561743 CLUAP1Q96AJ1 413 aa16.81■□□□□ 0.28
USB1-205ENST00000561743 TEPSINQ96N21 525 aa16.81■□□□□ 0.28
USB1-205ENST00000561743 SUGT1Q9Y2Z0 365 aa16.81■□□□□ 0.28
USB1-205ENST00000561743 MAST3O60307 1309 aa16.8■□□□□ 0.28
USB1-205ENST00000561743 TCP10L2B9ZVM9 353 aa16.8■□□□□ 0.28
USB1-205ENST00000561743 SRGAP3O43295 1099 aa16.8■□□□□ 0.28
USB1-205ENST00000561743 TM4SF4P48230 202 aa16.8■□□□□ 0.28
USB1-205ENST00000561743 SPRYD7Q5W111 196 aa16.8■□□□□ 0.28
USB1-205ENST00000561743 CLMNQ96JQ2 1002 aa16.8■□□□□ 0.28
USB1-205ENST00000561743 ZDHHC15Q96MV8 337 aa16.8■□□□□ 0.28
USB1-205ENST00000561743 MRIQ9BWK5 157 aa16.8■□□□□ 0.28
USB1-205ENST00000561743 MCOLN1Q9GZU1 580 aa16.8■□□□□ 0.28
USB1-205ENST00000561743 MYH2Q9UKX2 1941 aa16.8■□□□□ 0.28
USB1-205ENST00000561743 WDR66Q8TBY9 1149 aa16.79■□□□□ 0.28
USB1-205ENST00000561743 UNCXA6NJT0 531 aa16.78■□□□□ 0.28
USB1-205ENST00000561743 USP2O75604 605 aaPredicted RBP16.78■□□□□ 0.28
USB1-205ENST00000561743 PHKA1P46020 1223 aa16.78■□□□□ 0.28
USB1-205ENST00000561743 IREB2P48200 963 aaKnown RBP16.78■□□□□ 0.28
USB1-205ENST00000561743 CACNB3P54284 484 aa16.78■□□□□ 0.28
USB1-205ENST00000561743 SREBF2Q12772 1141 aa16.78■□□□□ 0.28
USB1-205ENST00000561743 DGKZQ13574 1117 aa16.78■□□□□ 0.28
USB1-205ENST00000561743 ZKSCAN2Q63HK3 967 aa16.78■□□□□ 0.28
USB1-205ENST00000561743 APOBEC3HQ6NTF7 200 aaKnown RBP16.78■□□□□ 0.28
USB1-205ENST00000561743 TMEM57Q8N5G2 664 aa16.78■□□□□ 0.28
USB1-205ENST00000561743 SLC10A4Q96EP9 437 aa16.78■□□□□ 0.28
USB1-205ENST00000561743 TMEM39BQ9GZU3 492 aa16.78■□□□□ 0.28
USB1-205ENST00000561743 ZBED9Q6R2W3 1325 aa16.77■□□□□ 0.28
USB1-205ENST00000561743 GNAI2P04899 355 aa16.77■□□□□ 0.28
USB1-205ENST00000561743 ADORA1P30542 326 aa16.77■□□□□ 0.28
USB1-205ENST00000561743 TNNI2P48788 182 aa16.77■□□□□ 0.28
USB1-205ENST00000561743 HHIPL2Q6UWX4 724 aa16.77■□□□□ 0.28
USB1-205ENST00000561743 WNK4Q96J92 1243 aa16.77■□□□□ 0.28
USB1-205ENST00000561743 GNL3LQ9NVN8 582 aaKnown RBP16.77■□□□□ 0.28
USB1-205ENST00000561743 AK9Q5TCS8 1911 aa16.76■□□□□ 0.27
USB1-205ENST00000561743 SALL1Q9NSC2 1324 aa16.76■□□□□ 0.27
USB1-205ENST00000561743 PNMA6EA0A0J9YXQ4 647 aa16.76■□□□□ 0.27
USB1-205ENST00000561743 SEMA3EO15041 775 aa16.76■□□□□ 0.27
USB1-205ENST00000561743 ZBTB22O15209 634 aa16.76■□□□□ 0.27
USB1-205ENST00000561743 TBC1D8O95759 1140 aa16.76■□□□□ 0.27
USB1-205ENST00000561743 ZBTB48P10074 688 aaPredicted RBP16.76■□□□□ 0.27
USB1-205ENST00000561743 PRDX5P30044 214 aa16.76■□□□□ 0.27
USB1-205ENST00000561743 CCDC102BQ68D86 513 aa16.76■□□□□ 0.27
USB1-205ENST00000561743 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.76■□□□□ 0.27
USB1-205ENST00000561743 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.76■□□□□ 0.27
USB1-205ENST00000561743 A0A1B0GUL7 405 aa16.75■□□□□ 0.27
USB1-205ENST00000561743 TIMM10P62072 90 aa16.75■□□□□ 0.27
USB1-205ENST00000561743 TFCP2Q12800 502 aa16.75■□□□□ 0.27
USB1-205ENST00000561743 ANKRD13AQ8IZ07 590 aa16.75■□□□□ 0.27
USB1-205ENST00000561743 TMOD2Q9NZR1 351 aa16.75■□□□□ 0.27
USB1-205ENST00000561743 DENND2AQ9ULE3 1009 aa16.75■□□□□ 0.27
USB1-205ENST00000561743 DOCK2Q92608 1830 aa16.75■□□□□ 0.27
USB1-205ENST00000561743 MANSC4A6NHS7 340 aaPredicted RBP16.74■□□□□ 0.27
USB1-205ENST00000561743 GJA5P36382 358 aa16.74■□□□□ 0.27
USB1-205ENST00000561743 RASGRF1Q13972 1273 aa16.74■□□□□ 0.27
USB1-205ENST00000561743 DIXDC1Q155Q3 683 aa16.74■□□□□ 0.27
USB1-205ENST00000561743 FKBP1CQ5VVH2 108 aa16.74■□□□□ 0.27
USB1-205ENST00000561743 FAM83AQ86UY5 434 aa16.74■□□□□ 0.27
USB1-205ENST00000561743 CFHR5Q9BXR6 569 aa16.74■□□□□ 0.27
USB1-205ENST00000561743 DAGLAQ9Y4D2 1042 aa16.74■□□□□ 0.27
USB1-205ENST00000561743 RPAP1Q9BWH6 1393 aaPredicted RBP16.74■□□□□ 0.27
USB1-205ENST00000561743 CCDC85CA6NKD9 419 aa16.73■□□□□ 0.27
USB1-205ENST00000561743 LDHBP07195 334 aaKnown RBP16.73■□□□□ 0.27
USB1-205ENST00000561743 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.73■□□□□ 0.27
USB1-205ENST00000561743 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.73■□□□□ 0.27
USB1-205ENST00000561743 ZNF296Q8WUU4 475 aaPredicted RBP16.73■□□□□ 0.27
USB1-205ENST00000561743 XAGE2Q96GT9 111 aa16.73■□□□□ 0.27
USB1-205ENST00000561743 AKAP2Q9Y2D5 859 aa16.73■□□□□ 0.27
USB1-205ENST00000561743 PDS5AQ29RF7 1337 aaKnown RBP16.72■□□□□ 0.27
USB1-205ENST00000561743 RLBP1P12271 317 aa16.72■□□□□ 0.27
USB1-205ENST00000561743 INHBEP58166 350 aa16.72■□□□□ 0.27
USB1-205ENST00000561743 VGLL4Q14135 290 aa16.72■□□□□ 0.27
USB1-205ENST00000561743 NOM1Q5C9Z4 860 aaKnown RBP16.72■□□□□ 0.27
USB1-205ENST00000561743 IFNL1Q8IU54 200 aa16.72■□□□□ 0.27
USB1-205ENST00000561743 R3HDMLQ9H3Y0 253 aa16.72■□□□□ 0.27
USB1-205ENST00000561743 ELP3Q9H9T3 547 aa16.72■□□□□ 0.27
USB1-205ENST00000561743 GPR25O00155 361 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 135.9 ms