RNA–Protein interactions for RNA: ENST00000561691.5

TUBGCP4-202, Transcript of tubulin gamma complex associated protein 4, humanhuman

TSL 1 (best)

Gene TUBGCP4, Length 1,928 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP4-202ENST00000561691 RBM6P78332 1123 aaKnown RBP12.1□□□□□ -0.47
TUBGCP4-202ENST00000561691 DDR1Q08345 913 aa12.1□□□□□ -0.47
TUBGCP4-202ENST00000561691 TXNRD1Q16881 649 aa12.1□□□□□ -0.47
TUBGCP4-202ENST00000561691 HS1BP3Q53T59 392 aa12.1□□□□□ -0.47
TUBGCP4-202ENST00000561691 FOXD4L5Q5VV16 416 aaPredicted RBP12.1□□□□□ -0.47
TUBGCP4-202ENST00000561691 MCTP1Q6DN14 999 aa12.1□□□□□ -0.47
TUBGCP4-202ENST00000561691 MB21D2Q8IYB1 491 aaPredicted RBP12.1□□□□□ -0.47
TUBGCP4-202ENST00000561691 FOXD4L4Q8WXT5 416 aaPredicted RBP12.1□□□□□ -0.47
TUBGCP4-202ENST00000561691 PRDM10Q9NQV6 1147 aa12.1□□□□□ -0.47
TUBGCP4-202ENST00000561691 MTMR6Q9Y217 621 aa12.1□□□□□ -0.47
TUBGCP4-202ENST00000561691 CACNA1SQ13698 1873 aa12.1□□□□□ -0.47
TUBGCP4-202ENST00000561691 EVCP57679 992 aa12.09□□□□□ -0.47
TUBGCP4-202ENST00000561691 ALX1Q15699 326 aa12.09□□□□□ -0.47
TUBGCP4-202ENST00000561691 CRY2Q49AN0 593 aa12.09□□□□□ -0.47
TUBGCP4-202ENST00000561691 ADGRA1Q86SQ6 560 aa12.09□□□□□ -0.47
TUBGCP4-202ENST00000561691 GTF3C6Q969F1 213 aa12.09□□□□□ -0.47
TUBGCP4-202ENST00000561691 CCDC94Q9BW85 323 aaPredicted RBP12.09□□□□□ -0.47
TUBGCP4-202ENST00000561691 DENND2AQ9ULE3 1009 aa12.09□□□□□ -0.47
TUBGCP4-202ENST00000561691 SMC3Q9UQE7 1217 aa12.09□□□□□ -0.47
TUBGCP4-202ENST00000561691 ZMYM6O95789 1325 aa12.09□□□□□ -0.47
TUBGCP4-202ENST00000561691 WDR33Q9C0J8 1336 aaKnown RBP12.09□□□□□ -0.47
TUBGCP4-202ENST00000561691 STX6O43752 255 aa12.09□□□□□ -0.47
TUBGCP4-202ENST00000561691 HMGB1P09429 215 aaKnown RBP12.09□□□□□ -0.47
TUBGCP4-202ENST00000561691 ZSCAN22P10073 491 aaPredicted RBP12.09□□□□□ -0.47
TUBGCP4-202ENST00000561691 MSNP26038 577 aaKnown RBP12.09□□□□□ -0.47
TUBGCP4-202ENST00000561691 ZNF827Q17R98 1081 aa12.09□□□□□ -0.47
TUBGCP4-202ENST00000561691 TXNRD3Q86VQ6 643 aa12.09□□□□□ -0.47
TUBGCP4-202ENST00000561691 TBC1D10CQ8IV04 446 aa12.09□□□□□ -0.47
TUBGCP4-202ENST00000561691 MAGEB6Q8N7X4 407 aa12.09□□□□□ -0.47
TUBGCP4-202ENST00000561691 GPHNQ9NQX3 736 aaPredicted RBP12.09□□□□□ -0.47
TUBGCP4-202ENST00000561691 CTNNA3Q9UI47 895 aa12.09□□□□□ -0.47
TUBGCP4-202ENST00000561691 PFKFB2O60825 505 aa12.08□□□□□ -0.48
TUBGCP4-202ENST00000561691 CTDNEP1O95476 244 aa12.08□□□□□ -0.48
TUBGCP4-202ENST00000561691 HAND2P61296 217 aa12.08□□□□□ -0.48
TUBGCP4-202ENST00000561691 PPP4R3BQ5MIZ7 849 aa12.08□□□□□ -0.48
TUBGCP4-202ENST00000561691 BRF1Q92994 677 aa12.08□□□□□ -0.48
TUBGCP4-202ENST00000561691 AKT1S1Q96B36 256 aa12.08□□□□□ -0.48
TUBGCP4-202ENST00000561691 IQSEC3Q9UPP2 1182 aaPredicted RBP12.08□□□□□ -0.48
TUBGCP4-202ENST00000561691 PNPLA7Q6ZV29 1317 aa12.08□□□□□ -0.48
TUBGCP4-202ENST00000561691 TIAM2Q8IVF5 1701 aa12.08□□□□□ -0.48
TUBGCP4-202ENST00000561691 KLRG2A4D1S0 409 aaPredicted RBP12.07□□□□□ -0.48
TUBGCP4-202ENST00000561691 GSG1L2A8MUP6 293 aa12.07□□□□□ -0.48
TUBGCP4-202ENST00000561691 POLRMTO00411 1230 aaKnown RBP12.07□□□□□ -0.48
TUBGCP4-202ENST00000561691 MBD4O95243 580 aa12.07□□□□□ -0.48
TUBGCP4-202ENST00000561691 PTMSP20962 102 aa12.07□□□□□ -0.48
TUBGCP4-202ENST00000561691 SCRN1Q12765 414 aa12.07□□□□□ -0.48
TUBGCP4-202ENST00000561691 MAP3K12Q12852 859 aa12.07□□□□□ -0.48
TUBGCP4-202ENST00000561691 KLHL40Q2TBA0 621 aa12.07□□□□□ -0.48
TUBGCP4-202ENST00000561691 SKOR2Q2VWA4 1001 aaPredicted RBP12.07□□□□□ -0.48
TUBGCP4-202ENST00000561691 ZNF772Q68DY9 489 aaPredicted RBP12.07□□□□□ -0.48
TUBGCP4-202ENST00000561691 CNBD1Q8NA66 436 aa12.07□□□□□ -0.48
TUBGCP4-202ENST00000561691 SMARCC2Q8TAQ2 1214 aa12.07□□□□□ -0.48
TUBGCP4-202ENST00000561691 GPT2Q8TD30 523 aa12.07□□□□□ -0.48
TUBGCP4-202ENST00000561691 IPO4Q8TEX9 1081 aaKnown RBP12.07□□□□□ -0.48
TUBGCP4-202ENST00000561691 PDS5AQ29RF7 1337 aaKnown RBP12.07□□□□□ -0.48
TUBGCP4-202ENST00000561691 PLSCR1O15162 318 aa12.07□□□□□ -0.48
TUBGCP4-202ENST00000561691 JAK2O60674 1132 aa12.07□□□□□ -0.48
TUBGCP4-202ENST00000561691 KIF20AO95235 890 aa12.07□□□□□ -0.48
TUBGCP4-202ENST00000561691 APOBRQ0VD83 1088 aa12.07□□□□□ -0.48
TUBGCP4-202ENST00000561691 GRAPQ13588 217 aa12.07□□□□□ -0.48
TUBGCP4-202ENST00000561691 IMMTQ16891 758 aaKnown RBP12.07□□□□□ -0.48
TUBGCP4-202ENST00000561691 CHST3Q7LGC8 479 aa12.07□□□□□ -0.48
TUBGCP4-202ENST00000561691 LCORLQ8N3X6 602 aa12.07□□□□□ -0.48
TUBGCP4-202ENST00000561691 GRAPLQ8TC17 118 aaPredicted RBP12.07□□□□□ -0.48
TUBGCP4-202ENST00000561691 GTPBP4Q9BZE4 634 aaKnown RBP12.07□□□□□ -0.48
TUBGCP4-202ENST00000561691 ARMT1Q9H993 441 aa12.07□□□□□ -0.48
TUBGCP4-202ENST00000561691 NSFL1CQ9UNZ2 370 aaKnown RBP12.07□□□□□ -0.48
TUBGCP4-202ENST00000561691 SALL1Q9NSC2 1324 aa12.06□□□□□ -0.48
TUBGCP4-202ENST00000561691 PRKAB2O43741 272 aa12.06□□□□□ -0.48
TUBGCP4-202ENST00000561691 F13A1P00488 732 aa12.06□□□□□ -0.48
TUBGCP4-202ENST00000561691 SERPINB2P05120 415 aa12.06□□□□□ -0.48
TUBGCP4-202ENST00000561691 NASPP49321 788 aaPredicted RBP12.06□□□□□ -0.48
TUBGCP4-202ENST00000561691 STK3Q13188 491 aa12.06□□□□□ -0.48
TUBGCP4-202ENST00000561691 TMEM87AQ8NBN3 555 aa12.06□□□□□ -0.48
TUBGCP4-202ENST00000561691 ANKRD2Q9GZV1 360 aa12.06□□□□□ -0.48
TUBGCP4-202ENST00000561691 RGS17Q9UGC6 210 aaPredicted RBP12.06□□□□□ -0.48
TUBGCP4-202ENST00000561691 NRXN2Q9P2S2 1712 aa12.06□□□□□ -0.48
TUBGCP4-202ENST00000561691 PATL2C9JE40 543 aaKnown RBP12.05□□□□□ -0.48
TUBGCP4-202ENST00000561691 PRPF40AO75400 957 aaKnown RBP12.05□□□□□ -0.48
TUBGCP4-202ENST00000561691 PDIA3P30101 505 aaKnown RBP12.05□□□□□ -0.48
TUBGCP4-202ENST00000561691 IFNL3Q8IZI9 196 aa12.05□□□□□ -0.48
TUBGCP4-202ENST00000561691 NSUN7Q8NE18 718 aaKnown RBP12.05□□□□□ -0.48
TUBGCP4-202ENST00000561691 RIOK1Q9BRS2 568 aaKnown RBP12.05□□□□□ -0.48
TUBGCP4-202ENST00000561691 NOL7Q9UMY1 257 aaKnown RBP12.05□□□□□ -0.48
TUBGCP4-202ENST00000561691 WDR19Q8NEZ3 1342 aa12.05□□□□□ -0.48
TUBGCP4-202ENST00000561691 SEMA3EO15041 775 aa12.05□□□□□ -0.48
TUBGCP4-202ENST00000561691 CYB5R4Q7L1T6 521 aa12.05□□□□□ -0.48
TUBGCP4-202ENST00000561691 AIDAQ96BJ3 306 aa12.05□□□□□ -0.48
TUBGCP4-202ENST00000561691 ZNF274Q96GC6 653 aaPredicted RBP12.05□□□□□ -0.48
TUBGCP4-202ENST00000561691 TNS1Q9HBL0 1735 aaKnown RBP12.05□□□□□ -0.48
TUBGCP4-202ENST00000561691 TMEM51Q9NW97 253 aa12.05□□□□□ -0.48
TUBGCP4-202ENST00000561691 RNF216Q9NWF9 866 aaPredicted RBP12.05□□□□□ -0.48
TUBGCP4-202ENST00000561691 TFCP2L1Q9NZI6 479 aa12.05□□□□□ -0.48
TUBGCP4-202ENST00000561691 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.05□□□□□ -0.48
TUBGCP4-202ENST00000561691 HPS5Q9UPZ3 1129 aa12.05□□□□□ -0.48
TUBGCP4-202ENST00000561691 NEDD4P46934 1319 aa12.05□□□□□ -0.48
TUBGCP4-202ENST00000561691 LTBP1Q14766 1721 aa12.04□□□□□ -0.48
TUBGCP4-202ENST00000561691 GOLGA6L22H0YM25 854 aa12.04□□□□□ -0.48
TUBGCP4-202ENST00000561691 ZNF213O14771 459 aa12.04□□□□□ -0.48
TUBGCP4-202ENST00000561691 HOXA10P31260 410 aaPredicted RBP12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 95.7 ms