RNA–Protein interactions for RNA: ENST00000561630.1

CDR2-202, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 5

Gene CDR2, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-202ENST00000561630 SEMA3EO15041 775 aa29.5■■■□□ 2.31
CDR2-202ENST00000561630 PHKA1P46020 1223 aa29.5■■■□□ 2.31
CDR2-202ENST00000561630 G3BP1Q13283 466 aaKnown RBP eCLIP29.5■■■□□ 2.31
CDR2-202ENST00000561630 SPDYE2Q495Y8 402 aa29.5■■■□□ 2.31
CDR2-202ENST00000561630 COL13A1Q5TAT6 717 aaPredicted RBP29.5■■■□□ 2.31
CDR2-202ENST00000561630 VEZTQ9HBM0 779 aa29.5■■■□□ 2.31
CDR2-202ENST00000561630 ARAP2Q8WZ64 1704 aa29.5■■■□□ 2.31
CDR2-202ENST00000561630 A0A1B0GUL7 405 aa29.49■■■□□ 2.31
CDR2-202ENST00000561630 CTCFP49711 727 aaPredicted RBP29.49■■■□□ 2.31
CDR2-202ENST00000561630 CCDC102BQ68D86 513 aa29.49■■■□□ 2.31
CDR2-202ENST00000561630 MOB2Q70IA6 237 aa29.49■■■□□ 2.31
CDR2-202ENST00000561630 ZNF70Q9UC06 446 aaPredicted RBP29.49■■■□□ 2.31
CDR2-202ENST00000561630 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP29.49■■■□□ 2.31
CDR2-202ENST00000561630 PAPPA2Q9BXP8 1791 aa29.49■■■□□ 2.31
CDR2-202ENST00000561630 MAST3O60307 1309 aa29.48■■■□□ 2.31
CDR2-202ENST00000561630 TEKT1Q969V4 418 aa29.48■■■□□ 2.31
CDR2-202ENST00000561630 DENND2AQ9ULE3 1009 aa29.48■■■□□ 2.31
CDR2-202ENST00000561630 UBE2Q2LH0YL09 131 aa29.47■■■□□ 2.31
CDR2-202ENST00000561630 TTLL12Q14166 644 aaPredicted RBP29.47■■■□□ 2.31
CDR2-202ENST00000561630 XAGE2Q96GT9 111 aa29.47■■■□□ 2.31
CDR2-202ENST00000561630 ZIC5Q96T25 663 aa29.47■■■□□ 2.31
CDR2-202ENST00000561630 BEGAINQ9BUH8 593 aa29.47■■■□□ 2.31
CDR2-202ENST00000561630 TDRD3Q9H7E2 651 aaKnown RBP29.47■■■□□ 2.31
CDR2-202ENST00000561630 SLC10A3P09131 477 aa29.46■■■□□ 2.31
CDR2-202ENST00000561630 ZDHHC15Q96MV8 337 aa29.46■■■□□ 2.31
CDR2-202ENST00000561630 TNFAIP1Q13829 316 aa29.45■■■□□ 2.31
CDR2-202ENST00000561630 RASA3Q14644 834 aa29.45■■■□□ 2.31
CDR2-202ENST00000561630 MVPQ14764 893 aaKnown RBP29.45■■■□□ 2.31
CDR2-202ENST00000561630 SALL1Q9NSC2 1324 aa29.45■■■□□ 2.3
CDR2-202ENST00000561630 HHIPL2Q6UWX4 724 aa29.44■■■□□ 2.3
CDR2-202ENST00000561630 NEUROD6Q96NK8 337 aa29.44■■■□□ 2.3
CDR2-202ENST00000561630 RASGRF1Q13972 1273 aa29.43■■■□□ 2.3
CDR2-202ENST00000561630 SUPT20HL1Q3ZLR7 823 aa29.43■■■□□ 2.3
CDR2-202ENST00000561630 APOBEC3HQ6NTF7 200 aaKnown RBP29.43■■■□□ 2.3
CDR2-202ENST00000561630 ARMC9Q7Z3E5 817 aa29.43■■■□□ 2.3
CDR2-202ENST00000561630 RASAL3Q86YV0 1011 aa29.43■■■□□ 2.3
CDR2-202ENST00000561630 PRDM10Q9NQV6 1147 aa29.43■■■□□ 2.3
CDR2-202ENST00000561630 PDS5AQ29RF7 1337 aaKnown RBP29.43■■■□□ 2.3
CDR2-202ENST00000561630 HSPA8P11142 646 aaKnown RBP29.42■■■□□ 2.3
CDR2-202ENST00000561630 CEP85Q6P2H3 762 aa29.42■■■□□ 2.3
CDR2-202ENST00000561630 NOP58Q9Y2X3 529 aaKnown RBP29.42■■■□□ 2.3
CDR2-202ENST00000561630 ECM29Q5VYK3 1845 aa29.41■■■□□ 2.3
CDR2-202ENST00000561630 SURF6O75683 361 aaKnown RBP29.41■■■□□ 2.3
CDR2-202ENST00000561630 PRDX5P30044 214 aa29.41■■■□□ 2.3
CDR2-202ENST00000561630 LBX1P52954 281 aa29.41■■■□□ 2.3
CDR2-202ENST00000561630 KIF23Q02241 960 aaPredicted RBP29.41■■■□□ 2.3
CDR2-202ENST00000561630 PRKG1Q13976 671 aa29.41■■■□□ 2.3
CDR2-202ENST00000561630 SSC5DA1L4H1 1573 aa29.4■■■□□ 2.3
CDR2-202ENST00000561630 CA12O43570 354 aa29.4■■■□□ 2.3
CDR2-202ENST00000561630 LDHBP07195 334 aaKnown RBP29.4■■■□□ 2.3
CDR2-202ENST00000561630 LDLRAD1Q5T700 205 aa29.4■■■□□ 2.3
CDR2-202ENST00000561630 NBPF12Q5TAG4 269 aaPredicted RBP29.4■■■□□ 2.3
CDR2-202ENST00000561630 GPR108Q9NPR9 543 aa29.4■■■□□ 2.3
CDR2-202ENST00000561630 ANGEL1Q9UNK9 670 aaKnown RBP29.4■■■□□ 2.3
CDR2-202ENST00000561630 TCP10L2B9ZVM9 353 aa29.39■■■□□ 2.3
CDR2-202ENST00000561630 PPP1R12BO60237 982 aaPredicted RBP29.39■■■□□ 2.3
CDR2-202ENST00000561630 OS9Q13438 667 aaPredicted RBP29.39■■■□□ 2.3
CDR2-202ENST00000561630 MAP3K11Q16584 847 aa29.39■■■□□ 2.3
CDR2-202ENST00000561630 ZGPATQ8N5A5 531 aaKnown RBP29.39■■■□□ 2.3
CDR2-202ENST00000561630 DDX19BQ9UMR2 479 aa29.39■■■□□ 2.3
CDR2-202ENST00000561630 TNNI2P48788 182 aa29.38■■■□□ 2.29
CDR2-202ENST00000561630 GORABQ5T7V8 394 aa29.38■■■□□ 2.29
CDR2-202ENST00000561630 FZD1Q9UP38 647 aa29.38■■■□□ 2.29
CDR2-202ENST00000561630 COG6Q9Y2V7 657 aa29.38■■■□□ 2.29
CDR2-202ENST00000561630 DIXDC1Q155Q3 683 aa29.37■■■□□ 2.29
CDR2-202ENST00000561630 TEPSINQ96N21 525 aa29.37■■■□□ 2.29
CDR2-202ENST00000561630 DAGLAQ9Y4D2 1042 aa29.37■■■□□ 2.29
CDR2-202ENST00000561630 TNNI3KQ59H18 835 aa29.36■■■□□ 2.29
CDR2-202ENST00000561630 FKBP1CQ5VVH2 108 aa29.36■■■□□ 2.29
CDR2-202ENST00000561630 TMEM39BQ9GZU3 492 aa29.36■■■□□ 2.29
CDR2-202ENST00000561630 TMOD2Q9NZR1 351 aa29.36■■■□□ 2.29
CDR2-202ENST00000561630 FPGT-TNNI3KV9GXZ4 949 aa29.36■■■□□ 2.29
CDR2-202ENST00000561630 ARID4AP29374 1257 aaPredicted RBP29.35■■■□□ 2.29
CDR2-202ENST00000561630 CACNB3P54284 484 aa29.35■■■□□ 2.29
CDR2-202ENST00000561630 IFFO2Q5TF58 517 aa29.35■■■□□ 2.29
CDR2-202ENST00000561630 REM2Q8IYK8 340 aaPredicted RBP29.35■■■□□ 2.29
CDR2-202ENST00000561630 CSRNP1Q96S65 589 aa29.35■■■□□ 2.29
CDR2-202ENST00000561630 ZBTB40Q9NUA8 1239 aa29.35■■■□□ 2.29
CDR2-202ENST00000561630 UNCXA6NJT0 531 aa29.34■■■□□ 2.29
CDR2-202ENST00000561630 PDE3AQ14432 1141 aa29.34■■■□□ 2.29
CDR2-202ENST00000561630 CDAN1Q8IWY9 1227 aa29.34■■■□□ 2.29
CDR2-202ENST00000561630 HMG20BQ9P0W2 317 aa29.34■■■□□ 2.29
CDR2-202ENST00000561630 MYH13Q9UKX3 1938 aa29.33■■■□□ 2.29
CDR2-202ENST00000561630 SPTY2D1Q68D10 685 aaPredicted RBP29.33■■■□□ 2.29
CDR2-202ENST00000561630 FAM83AQ86UY5 434 aa29.33■■■□□ 2.29
CDR2-202ENST00000561630 TNS4Q8IZW8 715 aa29.33■■■□□ 2.29
CDR2-202ENST00000561630 GOLGA6L2Q8N9W4 650 aaPredicted RBP29.33■■■□□ 2.29
CDR2-202ENST00000561630 SPATA5Q8NB90 893 aa29.33■■■□□ 2.29
CDR2-202ENST00000561630 CHMP4BQ9H444 224 aaKnown RBP29.33■■■□□ 2.29
CDR2-202ENST00000561630 ABCF2Q9UG63 623 aa29.33■■■□□ 2.29
CDR2-202ENST00000561630 TSKSQ9UJT2 592 aa29.33■■■□□ 2.29
CDR2-202ENST00000561630 USP2O75604 605 aaPredicted RBP29.32■■■□□ 2.28
CDR2-202ENST00000561630 IREB2P48200 963 aaKnown RBP29.32■■■□□ 2.28
CDR2-202ENST00000561630 UQCRFS1P1P0C7P4 283 aa29.31■■■□□ 2.28
CDR2-202ENST00000561630 C20orf194Q5TEA3 1177 aa29.31■■■□□ 2.28
CDR2-202ENST00000561630 CDC42EP5Q6NZY7 148 aa29.31■■■□□ 2.28
CDR2-202ENST00000561630 RPAP2Q8IXW5 612 aaPredicted RBP29.31■■■□□ 2.28
CDR2-202ENST00000561630 PI16Q6UXB8 463 aa29.3■■■□□ 2.28
CDR2-202ENST00000561630 DZIP1Q86YF9 867 aaKnown RBP29.3■■■□□ 2.28
CDR2-202ENST00000561630 SLC10A4Q96EP9 437 aa29.3■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms