RNA–Protein interactions for RNA: ENST00000561395.5

TPM1-231, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 673 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-231ENST00000561395 C3orf67Q6ZVT6 689 aa9.11□□□□□ -0.95
TPM1-231ENST00000561395 TRPM4Q8TD43 1214 aa9.11□□□□□ -0.95
TPM1-231ENST00000561395 ZC3H15Q8WU90 426 aaKnown RBP9.11□□□□□ -0.95
TPM1-231ENST00000561395 EVI5LQ96CN4 794 aa9.11□□□□□ -0.95
TPM1-231ENST00000561395 BOLA2Q9H3K6 86 aa9.11□□□□□ -0.95
TPM1-231ENST00000561395 SEC31BQ9NQW1 1179 aa9.11□□□□□ -0.95
TPM1-231ENST00000561395 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.11□□□□□ -0.95
TPM1-231ENST00000561395 MROH5Q6ZUA9 1318 aa9.1□□□□□ -0.95
TPM1-231ENST00000561395 HIRAP54198 1017 aaPredicted RBP9.1□□□□□ -0.95
TPM1-231ENST00000561395 TIMM10P62072 90 aa9.1□□□□□ -0.95
TPM1-231ENST00000561395 CXCL9Q07325 125 aa9.1□□□□□ -0.95
TPM1-231ENST00000561395 ATP2B3Q16720 1220 aa9.1□□□□□ -0.95
TPM1-231ENST00000561395 GRIPAP1Q4V328 841 aa9.1□□□□□ -0.95
TPM1-231ENST00000561395 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.1□□□□□ -0.95
TPM1-231ENST00000561395 RPGRQ92834 1020 aaKnown RBP9.1□□□□□ -0.95
TPM1-231ENST00000561395 NEUROD6Q96NK8 337 aa9.1□□□□□ -0.95
TPM1-231ENST00000561395 HAUS7Q99871 368 aa9.1□□□□□ -0.95
TPM1-231ENST00000561395 USP26Q9BXU7 913 aa9.1□□□□□ -0.95
TPM1-231ENST00000561395 MYH7P12883 1935 aa9.09□□□□□ -0.95
TPM1-231ENST00000561395 HIP1O00291 1037 aa9.09□□□□□ -0.95
TPM1-231ENST00000561395 PPEF1O14829 653 aaPredicted RBP9.09□□□□□ -0.95
TPM1-231ENST00000561395 SGSM2O43147 1006 aa9.09□□□□□ -0.95
TPM1-231ENST00000561395 PDE8BO95263 885 aa9.09□□□□□ -0.95
TPM1-231ENST00000561395 ADORA1P30542 326 aa9.09□□□□□ -0.95
TPM1-231ENST00000561395 IGHMBP2P38935 993 aaKnown RBP9.09□□□□□ -0.95
TPM1-231ENST00000561395 FXR1P51114 621 aaKnown RBP eCLIP9.09□□□□□ -0.95
TPM1-231ENST00000561395 ZNF157P51786 506 aaPredicted RBP9.09□□□□□ -0.95
TPM1-231ENST00000561395 PKN2Q16513 984 aaKnown RBP9.09□□□□□ -0.95
TPM1-231ENST00000561395 DLK2Q6UY11 383 aa9.09□□□□□ -0.95
TPM1-231ENST00000561395 USP48Q86UV5 1035 aa9.09□□□□□ -0.95
TPM1-231ENST00000561395 CCDC102AQ96A19 550 aa9.09□□□□□ -0.95
TPM1-231ENST00000561395 XAGE2Q96GT9 111 aa9.09□□□□□ -0.95
TPM1-231ENST00000561395 CDC5LQ99459 802 aaKnown RBP9.09□□□□□ -0.95
TPM1-231ENST00000561395 MPHOSPH8Q99549 860 aa9.09□□□□□ -0.95
TPM1-231ENST00000561395 GBA2Q9HCG7 927 aaPredicted RBP9.09□□□□□ -0.95
TPM1-231ENST00000561395 DIAPH3Q9NSV4 1193 aa9.09□□□□□ -0.95
TPM1-231ENST00000561395 ZNRF3Q9ULT6 936 aa9.09□□□□□ -0.95
TPM1-231ENST00000561395 SCN9AQ15858 1988 aa9.09□□□□□ -0.95
TPM1-231ENST00000561395 CEP290O15078 2479 aa9.09□□□□□ -0.95
TPM1-231ENST00000561395 LAMB1P07942 1786 aa9.09□□□□□ -0.95
TPM1-231ENST00000561395 HTTP42858 3142 aa9.09□□□□□ -0.95
TPM1-231ENST00000561395 TRIOBPQ9H2D6 2365 aa9.08□□□□□ -0.96
TPM1-231ENST00000561395 DUOX1Q9NRD9 1551 aa9.08□□□□□ -0.96
TPM1-231ENST00000561395 CENPFP49454 3210 aa9.08□□□□□ -0.96
TPM1-231ENST00000561395 EPB41L2O43491 1005 aaKnown RBP9.08□□□□□ -0.96
TPM1-231ENST00000561395 SLC10A3P09131 477 aa9.08□□□□□ -0.96
TPM1-231ENST00000561395 FGFR2P21802 821 aa9.08□□□□□ -0.96
TPM1-231ENST00000561395 HOXA10P31260 410 aaPredicted RBP9.08□□□□□ -0.96
TPM1-231ENST00000561395 PUM3Q15397 648 aaKnown RBP9.08□□□□□ -0.96
TPM1-231ENST00000561395 C2orf69Q8N8R5 385 aa9.08□□□□□ -0.96
TPM1-231ENST00000561395 RUFY2Q8WXA3 655 aa9.08□□□□□ -0.96
TPM1-231ENST00000561395 SPOCK2Q92563 424 aa9.08□□□□□ -0.96
TPM1-231ENST00000561395 NLRP3Q96P20 1036 aa9.08□□□□□ -0.96
TPM1-231ENST00000561395 CSRNP1Q96S65 589 aa9.08□□□□□ -0.96
TPM1-231ENST00000561395 KIF2CQ99661 725 aa9.08□□□□□ -0.96
TPM1-231ENST00000561395 FSD1Q9BTV5 496 aa9.08□□□□□ -0.96
TPM1-231ENST00000561395 IL25Q9H293 177 aa9.08□□□□□ -0.96
TPM1-231ENST00000561395 DOCK2Q92608 1830 aa9.08□□□□□ -0.96
TPM1-231ENST00000561395 RAD50Q92878 1312 aa9.07□□□□□ -0.96
TPM1-231ENST00000561395 SHTN1A0MZ66 631 aa9.07□□□□□ -0.96
TPM1-231ENST00000561395 IFIT1P09914 478 aaKnown RBP9.07□□□□□ -0.96
TPM1-231ENST00000561395 BECN1Q14457 450 aa9.07□□□□□ -0.96
TPM1-231ENST00000561395 CCDC158Q5M9N0 1113 aa9.07□□□□□ -0.96
TPM1-231ENST00000561395 TTC39AQ5SRH9 613 aa9.07□□□□□ -0.96
TPM1-231ENST00000561395 GORABQ5T7V8 394 aa9.07□□□□□ -0.96
TPM1-231ENST00000561395 TICAM2Q86XR7 235 aa9.07□□□□□ -0.96
TPM1-231ENST00000561395 ANKRD18AQ8IVF6 992 aa9.07□□□□□ -0.96
TPM1-231ENST00000561395 LPIN2Q92539 896 aa9.07□□□□□ -0.96
TPM1-231ENST00000561395 EDC3Q96F86 508 aaKnown RBP9.07□□□□□ -0.96
TPM1-231ENST00000561395 DNAJC2Q99543 621 aaKnown RBP9.07□□□□□ -0.96
TPM1-231ENST00000561395 ANO2Q9NQ90 1003 aa9.07□□□□□ -0.96
TPM1-231ENST00000561395 SNRKQ9NRH2 765 aa9.07□□□□□ -0.96
TPM1-231ENST00000561395 HDAC9Q9UKV0 1011 aa9.07□□□□□ -0.96
TPM1-231ENST00000561395 MED23Q9ULK4 1368 aa9.07□□□□□ -0.96
TPM1-231ENST00000561395 SZT2Q5T011 3432 aa9.06□□□□□ -0.96
TPM1-231ENST00000561395 ADM5C9JUS6 153 aa9.06□□□□□ -0.96
TPM1-231ENST00000561395 GOLIM4O00461 696 aa9.06□□□□□ -0.96
TPM1-231ENST00000561395 RAD17O75943 681 aa9.06□□□□□ -0.96
TPM1-231ENST00000561395 SLC5A1P13866 664 aa9.06□□□□□ -0.96
TPM1-231ENST00000561395 NMIQ13287 307 aaPredicted RBP9.06□□□□□ -0.96
TPM1-231ENST00000561395 CWC27Q6UX04 472 aaKnown RBP9.06□□□□□ -0.96
TPM1-231ENST00000561395 DDX46Q7L014 1031 aaKnown RBP9.06□□□□□ -0.96
TPM1-231ENST00000561395 KRT26Q7Z3Y9 468 aa9.06□□□□□ -0.96
TPM1-231ENST00000561395 KBTBD3Q8NAB2 608 aa9.06□□□□□ -0.96
TPM1-231ENST00000561395 HELBQ8NG08 1087 aaPredicted RBP9.06□□□□□ -0.96
TPM1-231ENST00000561395 ZNF296Q8WUU4 475 aaPredicted RBP9.06□□□□□ -0.96
TPM1-231ENST00000561395 RBM17Q96I25 401 aaKnown RBP9.06□□□□□ -0.96
TPM1-231ENST00000561395 ZNF512BQ96KM6 892 aaPredicted RBP9.06□□□□□ -0.96
TPM1-231ENST00000561395 CRAMP1Q96RY5 1269 aa9.06□□□□□ -0.96
TPM1-231ENST00000561395 LSG1Q9H089 658 aaKnown RBP9.06□□□□□ -0.96
TPM1-231ENST00000561395 VPS33BQ9H267 617 aa9.06□□□□□ -0.96
TPM1-231ENST00000561395 BSDC1Q9NW68 430 aaPredicted RBP9.06□□□□□ -0.96
TPM1-231ENST00000561395 PAG1Q9NWQ8 432 aa9.06□□□□□ -0.96
TPM1-231ENST00000561395 CNOT7Q9UIV1 285 aaKnown RBP9.06□□□□□ -0.96
TPM1-231ENST00000561395 NDUFB9Q9Y6M9 179 aa9.06□□□□□ -0.96
TPM1-231ENST00000561395 MYO5AQ9Y4I1 1855 aaKnown RBP9.05□□□□□ -0.96
TPM1-231ENST00000561395 A0A0D9SFI3 127 aa9.05□□□□□ -0.96
TPM1-231ENST00000561395 H7C1D1 291 aa9.05□□□□□ -0.96
TPM1-231ENST00000561395 ECM2O94769 699 aaPredicted RBP9.05□□□□□ -0.96
TPM1-231ENST00000561395 MCCP23508 829 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms