RNA–Protein interactions for RNA: ENST00000561354.1

CARMIL3-204, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 4

Gene CARMIL3, Length 564 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-204ENST00000561354 HDLBPQ00341 1268 aaKnown RBP14.93□□□□□ -0.02
CARMIL3-204ENST00000561354 RABL6Q3YEC7 729 aaPredicted RBP14.93□□□□□ -0.02
CARMIL3-204ENST00000561354 FBXO33Q7Z6M2 555 aa14.93□□□□□ -0.02
CARMIL3-204ENST00000561354 OPTNQ96CV9 577 aa14.93□□□□□ -0.02
CARMIL3-204ENST00000561354 MS4A4AQ96JQ5 239 aa14.93□□□□□ -0.02
CARMIL3-204ENST00000561354 SP3Q02447 781 aa14.92□□□□□ -0.02
CARMIL3-204ENST00000561354 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.92□□□□□ -0.02
CARMIL3-204ENST00000561354 CD99L2Q8TCZ2 262 aa14.92□□□□□ -0.02
CARMIL3-204ENST00000561354 ELP3Q9H9T3 547 aa14.92□□□□□ -0.02
CARMIL3-204ENST00000561354 ARAP2Q8WZ64 1704 aa14.92□□□□□ -0.02
CARMIL3-204ENST00000561354 MAP3K9P80192 1104 aa14.91□□□□□ -0.02
CARMIL3-204ENST00000561354 CDAN1Q8IWY9 1227 aa14.91□□□□□ -0.02
CARMIL3-204ENST00000561354 TBC1D22AQ8WUA7 517 aa14.91□□□□□ -0.02
CARMIL3-204ENST00000561354 ARMC5Q96C12 935 aa14.91□□□□□ -0.02
CARMIL3-204ENST00000561354 MRIQ9BWK5 157 aa14.91□□□□□ -0.02
CARMIL3-204ENST00000561354 EFCC1Q9HA90 598 aa14.91□□□□□ -0.02
CARMIL3-204ENST00000561354 OTOFQ9HC10 1997 aa14.91□□□□□ -0.02
CARMIL3-204ENST00000561354 POTEFA5A3E0 1075 aa14.9□□□□□ -0.02
CARMIL3-204ENST00000561354 TCP10L2B9ZVM9 353 aa14.9□□□□□ -0.02
CARMIL3-204ENST00000561354 GTF2A2P52657 109 aa14.9□□□□□ -0.02
CARMIL3-204ENST00000561354 VGLL4Q14135 290 aa14.9□□□□□ -0.02
CARMIL3-204ENST00000561354 CAVIN4Q5BKX8 364 aa14.9□□□□□ -0.02
CARMIL3-204ENST00000561354 VPS37DQ86XT2 251 aa14.9□□□□□ -0.02
CARMIL3-204ENST00000561354 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.9□□□□□ -0.02
CARMIL3-204ENST00000561354 TMEM39BQ9GZU3 492 aa14.9□□□□□ -0.02
CARMIL3-204ENST00000561354 BICC1Q9H694 974 aaKnown RBP14.9□□□□□ -0.02
CARMIL3-204ENST00000561354 PDE8BO95263 885 aa14.89□□□□□ -0.03
CARMIL3-204ENST00000561354 ARHGEF6Q15052 776 aa14.89□□□□□ -0.03
CARMIL3-204ENST00000561354 GRIK5Q16478 980 aa14.89□□□□□ -0.03
CARMIL3-204ENST00000561354 LRRC24Q50LG9 513 aa14.89□□□□□ -0.03
CARMIL3-204ENST00000561354 VGLL2Q8N8G2 317 aa14.89□□□□□ -0.03
CARMIL3-204ENST00000561354 BRI3BPQ8WY22 251 aa14.89□□□□□ -0.03
CARMIL3-204ENST00000561354 TEKT1Q969V4 418 aa14.89□□□□□ -0.03
CARMIL3-204ENST00000561354 GCC1Q96CN9 775 aa14.89□□□□□ -0.03
CARMIL3-204ENST00000561354 CSADQ9Y600 493 aa14.89□□□□□ -0.03
CARMIL3-204ENST00000561354 RBBP6Q7Z6E9 1792 aaKnown RBP14.88□□□□□ -0.03
CARMIL3-204ENST00000561354 CCL15-CCL14A0A0B4J2E2 113 aa14.88□□□□□ -0.03
CARMIL3-204ENST00000561354 SPDYE5A6NIY4 337 aa14.88□□□□□ -0.03
CARMIL3-204ENST00000561354 CAP1Q01518 475 aa14.88□□□□□ -0.03
CARMIL3-204ENST00000561354 CCL15Q16663 113 aa14.88□□□□□ -0.03
CARMIL3-204ENST00000561354 METTL24Q5JXM2 366 aa14.88□□□□□ -0.03
CARMIL3-204ENST00000561354 FKBP1CQ5VVH2 108 aa14.88□□□□□ -0.03
CARMIL3-204ENST00000561354 ANKRD44Q8N8A2 993 aa14.88□□□□□ -0.03
CARMIL3-204ENST00000561354 CNKSR2Q8WXI2 1034 aa14.88□□□□□ -0.03
CARMIL3-204ENST00000561354 ZDHHC15Q96MV8 337 aa14.88□□□□□ -0.03
CARMIL3-204ENST00000561354 ZFYVE28Q9HCC9 887 aa14.88□□□□□ -0.03
CARMIL3-204ENST00000561354 IQSEC3Q9UPP2 1182 aaPredicted RBP14.88□□□□□ -0.03
CARMIL3-204ENST00000561354 SUGT1Q9Y2Z0 365 aa14.88□□□□□ -0.03
CARMIL3-204ENST00000561354 ZNF521Q96K83 1311 aa14.88□□□□□ -0.03
CARMIL3-204ENST00000561354 KIF16BQ96L93 1317 aa14.88□□□□□ -0.03
CARMIL3-204ENST00000561354 FRAT2O75474 233 aaPredicted RBP14.87□□□□□ -0.03
CARMIL3-204ENST00000561354 CHAF1AQ13111 956 aaPredicted RBP14.87□□□□□ -0.03
CARMIL3-204ENST00000561354 TAF1CQ15572 869 aaPredicted RBP14.87□□□□□ -0.03
CARMIL3-204ENST00000561354 FAM83AQ86UY5 434 aa14.87□□□□□ -0.03
CARMIL3-204ENST00000561354 MRPL50Q8N5N7 158 aaKnown RBP14.87□□□□□ -0.03
CARMIL3-204ENST00000561354 HOOK2Q96ED9 719 aa14.87□□□□□ -0.03
CARMIL3-204ENST00000561354 ZCCHC17Q9NP64 241 aaKnown RBP14.87□□□□□ -0.03
CARMIL3-204ENST00000561354 PTPRCP08575 1304 aa14.87□□□□□ -0.03
CARMIL3-204ENST00000561354 BCAMP50895 628 aa14.86□□□□□ -0.03
CARMIL3-204ENST00000561354 APOBEC3HQ6NTF7 200 aaKnown RBP14.86□□□□□ -0.03
CARMIL3-204ENST00000561354 HHIPL2Q6UWX4 724 aa14.86□□□□□ -0.03
CARMIL3-204ENST00000561354 ERO1BQ86YB8 467 aa14.86□□□□□ -0.03
CARMIL3-204ENST00000561354 FAM9BQ8IZU0 186 aa14.86□□□□□ -0.03
CARMIL3-204ENST00000561354 FAM43AQ8N2R8 423 aa14.86□□□□□ -0.03
CARMIL3-204ENST00000561354 OTUD5Q96G74 571 aa14.86□□□□□ -0.03
CARMIL3-204ENST00000561354 TMOD2Q9NZR1 351 aa14.86□□□□□ -0.03
CARMIL3-204ENST00000561354 MAST3O60307 1309 aa14.86□□□□□ -0.03
CARMIL3-204ENST00000561354 WDHD1O75717 1129 aaPredicted RBP14.85□□□□□ -0.03
CARMIL3-204ENST00000561354 IFIT1P09914 478 aaKnown RBP14.85□□□□□ -0.03
CARMIL3-204ENST00000561354 CETPP11597 493 aa14.85□□□□□ -0.03
CARMIL3-204ENST00000561354 FGFR2P21802 821 aa14.85□□□□□ -0.03
CARMIL3-204ENST00000561354 CACNB3P54284 484 aa14.85□□□□□ -0.03
CARMIL3-204ENST00000561354 PUM3Q15397 648 aaKnown RBP14.85□□□□□ -0.03
CARMIL3-204ENST00000561354 ZNF333Q96JL9 665 aa14.85□□□□□ -0.03
CARMIL3-204ENST00000561354 TMEM106CQ9BVX2 250 aa14.85□□□□□ -0.03
CARMIL3-204ENST00000561354 USP44Q9H0E7 712 aa14.85□□□□□ -0.03
CARMIL3-204ENST00000561354 SNCAIPQ9Y6H5 919 aa14.85□□□□□ -0.03
CARMIL3-204ENST00000561354 KIAA0100Q14667 2235 aaKnown RBP14.84□□□□□ -0.03
CARMIL3-204ENST00000561354 TLR2O60603 784 aa14.84□□□□□ -0.03
CARMIL3-204ENST00000561354 EN2P19622 333 aaPredicted RBP14.84□□□□□ -0.03
CARMIL3-204ENST00000561354 NBPF11Q86T75 865 aa14.84□□□□□ -0.03
CARMIL3-204ENST00000561354 KLHDC4Q8TBB5 520 aa14.84□□□□□ -0.03
CARMIL3-204ENST00000561354 WRNIP1Q96S55 665 aa14.84□□□□□ -0.03
CARMIL3-204ENST00000561354 RPAP1Q9BWH6 1393 aaPredicted RBP14.84□□□□□ -0.03
CARMIL3-204ENST00000561354 ZNF316A6NFI3 1004 aaPredicted RBP14.83□□□□□ -0.04
CARMIL3-204ENST00000561354 IRF6O14896 467 aa14.83□□□□□ -0.04
CARMIL3-204ENST00000561354 PPIL2Q13356 520 aa14.83□□□□□ -0.04
CARMIL3-204ENST00000561354 SNAPC2Q13487 334 aa14.83□□□□□ -0.04
CARMIL3-204ENST00000561354 SLC9C1Q4G0N8 1177 aa14.83□□□□□ -0.04
CARMIL3-204ENST00000561354 DCAF15Q66K64 600 aa14.83□□□□□ -0.04
CARMIL3-204ENST00000561354 PTCH2Q9Y6C5 1203 aa14.83□□□□□ -0.04
CARMIL3-204ENST00000561354 BTBD19C9JJ37 291 aa14.82□□□□□ -0.04
CARMIL3-204ENST00000561354 EYA2O00167 538 aa14.82□□□□□ -0.04
CARMIL3-204ENST00000561354 GNRH1P01148 92 aa14.82□□□□□ -0.04
CARMIL3-204ENST00000561354 RFX5P48382 616 aaPredicted RBP14.82□□□□□ -0.04
CARMIL3-204ENST00000561354 WDR66Q8TBY9 1149 aa14.82□□□□□ -0.04
CARMIL3-204ENST00000561354 LPIN2Q92539 896 aa14.82□□□□□ -0.04
CARMIL3-204ENST00000561354 ZKSCAN4Q969J2 545 aaPredicted RBP14.82□□□□□ -0.04
CARMIL3-204ENST00000561354 HTTP42858 3142 aa14.81□□□□□ -0.04
CARMIL3-204ENST00000561354 SLC5A1P13866 664 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms