RNA–Protein interactions for RNA: ENST00000561348.1

HERC1-212, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 588 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-212ENST00000561348 SNRKQ9NRH2 765 aa12.45□□□□□ -0.42
HERC1-212ENST00000561348 DENND2AQ9ULE3 1009 aa12.45□□□□□ -0.42
HERC1-212ENST00000561348 FPGT-TNNI3KV9GXZ4 949 aa12.45□□□□□ -0.42
HERC1-212ENST00000561348 LDHBP07195 334 aaKnown RBP12.44□□□□□ -0.42
HERC1-212ENST00000561348 FKBP1AP62942 108 aaKnown RBP12.44□□□□□ -0.42
HERC1-212ENST00000561348 RASGRF1Q13972 1273 aa12.44□□□□□ -0.42
HERC1-212ENST00000561348 DEFB115Q30KQ5 88 aa12.44□□□□□ -0.42
HERC1-212ENST00000561348 AACSQ86V21 672 aa12.44□□□□□ -0.42
HERC1-212ENST00000561348 ERC1Q8IUD2 1116 aa12.44□□□□□ -0.42
HERC1-212ENST00000561348 C2orf69Q8N8R5 385 aa12.44□□□□□ -0.42
HERC1-212ENST00000561348 TEKT1Q969V4 418 aa12.44□□□□□ -0.42
HERC1-212ENST00000561348 KLRG1Q96E93 195 aa12.44□□□□□ -0.42
HERC1-212ENST00000561348 DBNDD2Q9BQY9 259 aa12.44□□□□□ -0.42
HERC1-212ENST00000561348 TDRD3Q9H7E2 651 aaKnown RBP12.44□□□□□ -0.42
HERC1-212ENST00000561348 SPDYE2BA6NHP3 402 aa12.43□□□□□ -0.42
HERC1-212ENST00000561348 TCP10L2B9ZVM9 353 aa12.43□□□□□ -0.42
HERC1-212ENST00000561348 SPDYE6P0CI01 402 aa12.43□□□□□ -0.42
HERC1-212ENST00000561348 PRDX5P30044 214 aa12.43□□□□□ -0.42
HERC1-212ENST00000561348 CACNB3P54284 484 aa12.43□□□□□ -0.42
HERC1-212ENST00000561348 HSP90AB4PQ58FF6 505 aa12.43□□□□□ -0.42
HERC1-212ENST00000561348 PI16Q6UXB8 463 aa12.43□□□□□ -0.42
HERC1-212ENST00000561348 TBC1D9Q6ZT07 1266 aa12.43□□□□□ -0.42
HERC1-212ENST00000561348 DZIP1Q86YF9 867 aaKnown RBP12.43□□□□□ -0.42
HERC1-212ENST00000561348 APOBEC3FQ8IUX4 373 aaKnown RBP12.43□□□□□ -0.42
HERC1-212ENST00000561348 SUPT16HQ9Y5B9 1047 aaKnown RBP12.43□□□□□ -0.42
HERC1-212ENST00000561348 ZNF646O15015 1829 aaPredicted RBP12.43□□□□□ -0.42
HERC1-212ENST00000561348 ZNF609O15014 1411 aa12.43□□□□□ -0.42
HERC1-212ENST00000561348 TRPM7Q96QT4 1865 aa12.42□□□□□ -0.42
HERC1-212ENST00000561348 NF2P35240 595 aa12.42□□□□□ -0.42
HERC1-212ENST00000561348 HUNKP57058 714 aa12.42□□□□□ -0.42
HERC1-212ENST00000561348 IRX6P78412 446 aaPredicted RBP12.42□□□□□ -0.42
HERC1-212ENST00000561348 DIXDC1Q155Q3 683 aa12.42□□□□□ -0.42
HERC1-212ENST00000561348 CYP4F22Q6NT55 531 aa12.42□□□□□ -0.42
HERC1-212ENST00000561348 SIRT2Q8IXJ6 389 aa12.42□□□□□ -0.42
HERC1-212ENST00000561348 DNAJC5GQ8N7S2 189 aa12.42□□□□□ -0.42
HERC1-212ENST00000561348 SPATA5Q8NB90 893 aa12.42□□□□□ -0.42
HERC1-212ENST00000561348 RHPN1Q8TCX5 695 aa12.42□□□□□ -0.42
HERC1-212ENST00000561348 GBA2Q9HCG7 927 aaPredicted RBP12.42□□□□□ -0.42
HERC1-212ENST00000561348 TLR7Q9NYK1 1049 aaKnown RBP12.42□□□□□ -0.42
HERC1-212ENST00000561348 TMOD2Q9NZR1 351 aa12.42□□□□□ -0.42
HERC1-212ENST00000561348 RAI14Q9P0K7 980 aa12.42□□□□□ -0.42
HERC1-212ENST00000561348 NOP58Q9Y2X3 529 aaKnown RBP12.42□□□□□ -0.42
HERC1-212ENST00000561348 MAST3O60307 1309 aa12.41□□□□□ -0.42
HERC1-212ENST00000561348 AOX1Q06278 1338 aa12.41□□□□□ -0.42
HERC1-212ENST00000561348 COL1A1P02452 1464 aaPredicted RBP12.41□□□□□ -0.42
HERC1-212ENST00000561348 SEMA3EO15041 775 aa12.41□□□□□ -0.42
HERC1-212ENST00000561348 IFIT2P09913 472 aaKnown RBP12.41□□□□□ -0.42
HERC1-212ENST00000561348 UQCRFS1P1P0C7P4 283 aa12.41□□□□□ -0.42
HERC1-212ENST00000561348 VEGFBP49765 207 aa12.41□□□□□ -0.42
HERC1-212ENST00000561348 MMP14P50281 582 aa12.41□□□□□ -0.42
HERC1-212ENST00000561348 MOB2Q70IA6 237 aa12.41□□□□□ -0.42
HERC1-212ENST00000561348 ERICH6Q7L0X2 663 aa12.41□□□□□ -0.42
HERC1-212ENST00000561348 CLASRPQ8N2M8 674 aaKnown RBP12.41□□□□□ -0.42
HERC1-212ENST00000561348 ZGPATQ8N5A5 531 aaKnown RBP12.41□□□□□ -0.42
HERC1-212ENST00000561348 EAF2Q96CJ1 260 aaPredicted RBP12.41□□□□□ -0.42
HERC1-212ENST00000561348 DEFB129Q9H1M3 183 aa12.41□□□□□ -0.42
HERC1-212ENST00000561348 HMG20BQ9P0W2 317 aa12.41□□□□□ -0.42
HERC1-212ENST00000561348 LRP2BPQ9P2M1 347 aa12.41□□□□□ -0.42
HERC1-212ENST00000561348 ZNF70Q9UC06 446 aaPredicted RBP12.41□□□□□ -0.42
HERC1-212ENST00000561348 SERPINA10Q9UK55 444 aa12.41□□□□□ -0.42
HERC1-212ENST00000561348 FZD1Q9UP38 647 aa12.41□□□□□ -0.42
HERC1-212ENST00000561348 PITPNM2Q9BZ72 1349 aa12.4□□□□□ -0.42
HERC1-212ENST00000561348 UBE2Q2LH0YL09 131 aa12.4□□□□□ -0.42
HERC1-212ENST00000561348 SMARCA5O60264 1052 aaPredicted RBP12.4□□□□□ -0.42
HERC1-212ENST00000561348 MCAMP43121 646 aa12.4□□□□□ -0.42
HERC1-212ENST00000561348 SPTY2D1Q68D10 685 aaPredicted RBP12.4□□□□□ -0.42
HERC1-212ENST00000561348 KIF1BPQ96EK5 621 aa12.4□□□□□ -0.42
HERC1-212ENST00000561348 CAPNS2Q96L46 248 aa12.4□□□□□ -0.42
HERC1-212ENST00000561348 GPR108Q9NPR9 543 aa12.4□□□□□ -0.42
HERC1-212ENST00000561348 DBNLQ9UJU6 430 aaKnown RBP12.4□□□□□ -0.42
HERC1-212ENST00000561348 TLL2Q9Y6L7 1015 aa12.4□□□□□ -0.42
HERC1-212ENST00000561348 CEP350Q5VT06 3117 aa12.39□□□□□ -0.43
HERC1-212ENST00000561348 TNNI2P48788 182 aa12.39□□□□□ -0.43
HERC1-212ENST00000561348 ZNF157P51786 506 aaPredicted RBP12.39□□□□□ -0.43
HERC1-212ENST00000561348 TCP10Q12799 353 aa12.39□□□□□ -0.43
HERC1-212ENST00000561348 RASA3Q14644 834 aa12.39□□□□□ -0.43
HERC1-212ENST00000561348 SAPCD2Q86UD0 394 aa12.39□□□□□ -0.43
HERC1-212ENST00000561348 MTMR14Q8NCE2 650 aa12.39□□□□□ -0.43
HERC1-212ENST00000561348 NDUFB9Q9Y6M9 179 aa12.39□□□□□ -0.43
HERC1-212ENST00000561348 CNTNAP1P78357 1384 aa12.39□□□□□ -0.43
HERC1-212ENST00000561348 ARAP2Q8WZ64 1704 aa12.39□□□□□ -0.43
HERC1-212ENST00000561348 WDR33Q9C0J8 1336 aaKnown RBP12.38□□□□□ -0.43
HERC1-212ENST00000561348 AOC2O75106 756 aa12.38□□□□□ -0.43
HERC1-212ENST00000561348 RAB11FIP3O75154 756 aa12.38□□□□□ -0.43
HERC1-212ENST00000561348 ECE1P42892 770 aa12.38□□□□□ -0.43
HERC1-212ENST00000561348 ZAP70P43403 619 aa12.38□□□□□ -0.43
HERC1-212ENST00000561348 MKRN3Q13064 507 aaKnown RBP12.38□□□□□ -0.43
HERC1-212ENST00000561348 TNFAIP1Q13829 316 aa12.38□□□□□ -0.43
HERC1-212ENST00000561348 SPDYE2Q495Y8 402 aa12.38□□□□□ -0.43
HERC1-212ENST00000561348 ZBED3Q96IU2 234 aaPredicted RBP12.38□□□□□ -0.43
HERC1-212ENST00000561348 DNAJC2Q99543 621 aaKnown RBP12.38□□□□□ -0.43
HERC1-212ENST00000561348 USP40Q9NVE5 1235 aa12.38□□□□□ -0.43
HERC1-212ENST00000561348 ZBTB47Q9UFB7 747 aaPredicted RBP12.38□□□□□ -0.43
HERC1-212ENST00000561348 ANGEL1Q9UNK9 670 aaKnown RBP12.38□□□□□ -0.43
HERC1-212ENST00000561348 SUGT1Q9Y2Z0 365 aa12.38□□□□□ -0.43
HERC1-212ENST00000561348 DAGLAQ9Y4D2 1042 aa12.38□□□□□ -0.43
HERC1-212ENST00000561348 PCDHB15Q9Y5E8 787 aa12.38□□□□□ -0.43
HERC1-212ENST00000561348 RASSF10A6NK89 507 aa12.37□□□□□ -0.43
HERC1-212ENST00000561348 IDH1O75874 414 aaKnown RBP12.37□□□□□ -0.43
HERC1-212ENST00000561348 ARID4AP29374 1257 aaPredicted RBP12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 95.7 ms